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Volumn 19, Issue 15, 2009, Pages 4014-4017

Discovery of a new class of catalytic topoisomerase II inhibitors targeting the ATP-binding site by structure based design. Part I

Author keywords

Anticancer agents; ATPase inhibitors; Structure based design; Topoisomerase II inhibitors

Indexed keywords

ADENOSINE TRIPHOSPHATASE; ADENOSINE TRIPHOSPHATE; GYRASE INHIBITOR;

EID: 67649959170     PISSN: 0960894X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bmcl.2009.06.034     Document Type: Article
Times cited : (46)

References (26)
  • 20
    • 27744591551 scopus 로고    scopus 로고
    • A X-ray crystal structure of this domain became later available: The reported modeling and design work was repeated using this crystal structure and led to the same results as those obtained with the homology model in line with the fact that, besides minor differences in the conformation of a few residue side chains, the homology model is identical to the X-ray structure
    • A X-ray crystal structure of this domain became later available:. Wei H., Ruthenburg A.J., Bechis S.K., and Verdine G.L. J. Biol. Chem. 280 (2005) 37041 The reported modeling and design work was repeated using this crystal structure and led to the same results as those obtained with the homology model in line with the fact that, besides minor differences in the conformation of a few residue side chains, the homology model is identical to the X-ray structure
    • (2005) J. Biol. Chem. , vol.280 , pp. 37041
    • Wei, H.1    Ruthenburg, A.J.2    Bechis, S.K.3    Verdine, G.L.4
  • 21
    • 67649901940 scopus 로고    scopus 로고
    • note
    • Homology modeling was performed with the program WHAT IF: Vriend, G. J. Mol. Graph. 1990, 8, 52, after sequence alignment in T-Coffe: Notredame, C.; Higgins, D. G.; Heringa, J. J. Mol. Biol. 2000, 302, 205. The DNA gyrase structure used is reported in : Brino, L.; Urzhumtsev, A.; Mousli, M.; Bronner, C.; Mitschler, A.; Oudet, P.; Moras, D. J. Biol. Chem. 2000, 275, 9468 (PDB code 1EI1). The sequence of human topoisomerase IIα was retrieved from the Swiss-Prot database (entry code P11388).
  • 23
    • 67649940110 scopus 로고    scopus 로고
    • note
    • This residue is either an asparagine or an aspartic acid in the GHKL ATPase family.
  • 25
    • 67649957371 scopus 로고    scopus 로고
    • note
    • The ATPase assay is described in Ref. 10.
  • 26
    • 0028153795 scopus 로고
    • For a review on this type of interaction see:
    • For a review on this type of interaction see:. Flocco M.M., and Mowbray S.L. J. Mol. Biol. 235 (1994) 709
    • (1994) J. Mol. Biol. , vol.235 , pp. 709
    • Flocco, M.M.1    Mowbray, S.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.