Soft Tissue Modeling for Surgery Simulation

Handbook of Numerical Analysis

Volumn 12, Issue , 2004, Pages 453-550

  Delingette, Hervé ^a   Ayache, Nicholas ^a  

^a INRIA   (France)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 67649659795     PISSN: 15708659     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S1570-8659(03)12005-4     Document Type: Review

References (111)

1. Ackerman M.J. The visible human project. Proc. IEEE: Special Issue on Surgery Simulation 86 3 (1998) 504-511
2. Ayache N. Epidaure: a research project in medical image analysis, simulation and robotics at INRIA. IEEE Trans. Medical Imaging (2003) Invited Editorial
3. In: Ayache N., and Delingette H. (Eds). Int. Symp. on Surgery Simulation and Soft Tissue Modeling. Juan-Les-Pins, France, June 1998. Lecture Notes in Comput. Sci. vol. 2673 (2003), Springer-Verlag, New York
4. Baraff D., and Witkin A. Large steps in cloth simulation. Computer Graphics Proceedings. SIGGRAPH'98, Orlando, USA, July 1998 (1998) 43-54
5. Bassingthwaighte J.B. Strategies for the physiome project. Ann. Biomed. Engrg. 28 (2000) 1043-1058
6. Bathe K.-L. Finite Element Procedures in Engineering Analysis (1982), Prentice Hall, New York
7. Bayraktar H., Adams M., Gupta A., Papadopoulos P., and Keaveny T. The role of large deformations in trabecular bone mechanical behavior. ASME Bioengineering Conference. Key Biscayne, FL, USA, June 2003 (2003)
8. Benzley S.E., Perry E., Clark B., Merkley K., and Sjaardema G. Comparison of all-hexahedral and all-tetrahedral finite element meshes for elastic and elasto-plastic analysis. Proc. 4th Int. Meshing Roundtable. Sandia National Laboratories, October 1995 (1995) 179-191
9. Berci G., Hunter J.G., and Sackier J.M. Training in laparoscopic cholecystectomy: Quantifying the learning curve. J. Endoscopic Surgery 8 (1994) 28-31
10. Besag J. On the statistical analysis of dirty pictures. J. Roy. Statist. Soc. 48 3 (1986) 326-338
11. Bielser D., and Gross M.H. Interactive simulation of surgical cuts. Proc. Pacific Graphics 2000. Hong-Kong, October 2000 (2000), IEEE Computer Society Press 116-125
12. Boux de Casson F., and Laugier C. Modelling the dynamics of a human liver for a minimally invasive simulator. Proc. Int. Conf. on Medical Image Computer-Assisted Intervention. Cambridge, UK, September 1999 (1999)
13. Bro-Nielsen M. Finite element modeling in surgery simulation. Proc. IEEE: Special Issue on Surgery Simulation 86 3 (1998) 490-503
14. Bro-Nielsen M., and Cotin S. Real-time volumetric deformable models for surgery simulation using finite elements and condensation. Eurographics'96, vol. 3 (1996) 57-66
15. Bronshtein I.N., and Semendyayev K.A. Handbook of Mathematics (1985), Van Nostrand-Reinhold, New York
16. Brown J.D., Rosen J., Kim Y., Chang L., Sinanan M., and Hannaford B. In-vivo and in-situ compressive properties of porcine abdominal soft tissue. Medicine Meets Virtual Reality. MMVR'03, Newport Beach, USA, January 2003 (2003)
17. Canas J., and Paris F. Boundary Element Method: Fundamentals and Application (1997), Oxford Univ. Press, London
18. Carter F.J. Biomechanical testing of intra-abdominal soft tissue. Int. Workshop on Soft Tissue Deformation and Tissue Palpation. Cambridge, MA, October 1998 (1998)
19. Ciarlet P.G. Mathematical Elasticity, vol. 1: Three-dimensional Elasticity (1987), North-Holland, Amsterdam ISBN 0-444-70259-8
20. Cosmi F. Numerical solution of plane elasticity problems with the cell method. Comput. Methods Engrg. Sci. 2 3 (2001)
21. Costa I.F., and Balaniuk R. Lem - an approach for real time physically based soft tissue simulation. Int. Conf. Automation and Robotics. ICRA'2001, Seoul, May 2001 (2001)
22. Cotin S., Delingette H., and Ayache N. Real-time elastic deformations of soft tissues for surgery simulation. IEEE Trans. Visual. Comput. Graph. 5 1 (1999) 62-73
23. Cotin S., Delingette H., and Ayache N. Real-time elastic deformations of soft tissues for surgery simulation. IEEE Trans. Visual. Comput. Graph. 5 1 (1999) 62-73
24. Cotin S., Delingette H., and Ayache N. A hybrid elastic model allowing real-time cutting, deformations and force-feedback for surgery training and simulation. The Visual Computer 16 8 (2000) 437-452
25. Cotin S., Delingette H., Clement J.-M., Tassetti V., Marescaux J., and Ayache N. Volumetric deformable models for simulation of laparoscopic surgery. Proc. Int. Symp. on Computer and Communication Systems for Image Guided Diagnosis and Therapy, Computer Assisted Radiology. CAR'96. Int. Congr. Ser. vol. 1124 (1996), Elsevier, Amsterdam
26. Couinaud. Le foie, Études anatomiques et chirurgicales (1957), Masson, Paris
27. Cover S.A., Ezquerra N.F., and O'Brien J.F. Interactively deformable models for surgery simulation. IEEE Comput. Graph. Appl. 13 (1993) 68-75
28. Dan D. (1999). Caractérisation mécanique du foie humain en situation de choc, PhD thesis, Université Paris 7
29. Debunne G., Desbrun M., Cani M.-P., and Barr A.H. Dynamic real-time deformations using space and time adaptive sampling. Computer Graphics Proceedings. SIGGRAPH'01, August 2001 (2001)
30. Decoret X., Schaufler G., Sillion F., and Dorsey J. Multi-layered impostors for accelerated rendering. Computer Graphics Forum (Eurographics'99) 18 (1999) 61-73
31. Delingette H. Towards realistic soft tissue modeling in medical simulation. Proc. IEEE: Special Issue on Surgery Simulation 86 (1998) 512-523
32. Delingette H. General object reconstruction based on simplex meshes. Int. J. Comput. Vision 32 2 (1999) 111-146
33. Delingette H., and Montagnat J. Shape and topology constraints on parametric active contours. J. Comput. Vision and Image Understanding 83 (2001) 140-171
34. Desbrun M., and Gascuel M.-P. Animating soft substances with implicit surfaces. Computer Graphics. SIGGRAPH'95, Los Angeles (1995)
35. Deussen O., Kobbelt L., and Tucke P. Using simulated annealing to obtain a good approximation of deformable bodies. Proc. Eurographics Workshop on Animation and Simulation. Maastricht, Netherlands, September 1995 (1995), Springer-Verlag, Berlin
36. Duncan J., and Ayache N. Medical image analysis: Progress over two decades and the challenges ahead. IEEE Trans. on Pattern Analysis and Machine Intelligence 22 1 (2000) 85-106
37. Forest C., Delingette H., and Ayache N. Cutting simulation of manifold volumetric meshes. Modelling and Simulation for Computer-aided Medicine and Surgery. MS4CMS'02 (2002)
38. Forest C., Delingette H., and Ayache N. Removing tetrahedra from a manifold mesh. Computer Animation. CA'02, Geneva, Switzerland, June 2002 (2002), IEEE Computer Society 225-229
39. Forest C., Delingette H., Ayache N. (2003). Simulation of surgical cutting in a manifold mesh by removing tetrahedra, Medical Image Analysis, submitted for publication
40. France L., Angelidis A., Meseure P., Cani M.-P., Lenoir J., Faure F., and Chaillou C. Implicit representations of the human intestines for surgery simulation. Conf. on Modeling and Simulation for Computer-aided Medicine and Surgery. MS4CMS'02, Rocquencourt, November 2002 (2002)
41. France L., Lenoir J., Meseure P., and Chaillou C. Simulation of minimally invasive surgery of intestines. In: Richir S. (Ed). Fourth Virtual Reality International Conference. VRIC'2002 (2002) 21-27 ISBN 2-9515730
42. Fung Y.C. Biomechanics - Mechanical Properties of Living Tissues. second ed. (1993), Springer-Verlag, Berlin
43. Gibson S., Samosky J., Mor A., Fyock C., Grimson E., Kanade T., Kikinis R., Lauer H., and McKenzie N. Simulating arthroscopic knee surgery using volumetric object representations, real-time volume rendering and haptic feedback. In: Troccaz J., Grimson E., and Mosges R. (Eds). Proc. First Joint Conf. CVRMed-MRCAS'97. Lecture Notes in Comput. Sci. vol. 1205 (1997) 369-378
44. Gladilin E. (2002). Biomechanical modeling of soft tissue and facial expressions for craniofacial surgery planning, PhD thesis, Freie Univerisität Berlin, Germany
45. Gottschalk S., Lin M., and Manocha D. Obb-tree: A hierarchical structure for rapid interference detection. Proc. SIGGRAPH 96. New Orleans, LA (1996) 171-180 ISBN 0-201-94800-1
46. Hodgskinson R., and Currey J.D. Young modulus, density and material properties in cancellous bone over a large density range. J. Materials Science: Materials in Medicine 3 (1992) 377-381
47. Houbolt J.C. A recurrence matrix solution for the dynamic response of elastic aircraft. J. Aeronautical Sci. 17 (1950) 540-550
48. Humphrey J.D., Strumpf R.K., and Yin F.C.P. Determination of a constitutive relation for passive myocardium: I. A new functional form. ASME J. Biomech. Engrg. 112 (1990) 333-339
49. Humphrey J.D., and Yin F.C.P. On constitutive relations and finite deformations of passive cardiac tissue: I. A pseudostrain-energy function. ASME J. Biomech. Engrg. 109 (1987) 298-304
50. Hunter P., and Pullan A. FEM/BEM Notes (1997), University of Auckland, New-Zeland. Available at http://www1.esc.auckland.ac.nz/Academic/Texts/fembemnotes.pdf
51. James D.L., and Pai D.K. Artdefo accurate real time deformable objects. Computer Graphics. SIGGRAPH'99 (1999) 65-72
52. Joe B. Geompack - a software package for the generation of meshes using geometric algorithms. J. Advanced Eng. Software 13 (1991) 325-331
53. Kaiss M., and Le Tallec P. La modélisation numérique du contact œil-trépan. Revue Européenne des éléments Finis 5 3 (1996) 375-408
54. Kass M., Witkin A., and Terzopoulos D. Snakes: Active contour models. Int. J. Comput. Vision 1 (1988) 321-331
55. Kauer M., Vuskovic V., Dual J., Székely G., and Bajka M. Inverse finite element characterization of soft tissues. Proc. 4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention. MICCAI'01, Utrecht, October 2001. Lecture Notes in Comput. Sci. vol. 2208 (2001) 128-136
56. Kaye J., Primiano F., and Metaxas D. A 3d virtual environment for modeling mechanical cardiopulmonary interactions. Medical Image Analysis (Media) 2 2 (1997) 1-26
57. Knott D., and Pai D. Collision and interference detection in real-time using graphics hardware. Proc. Graphics Interface. Halifax, Canada, June 2003 (2003)
58. Kuhn Ch., Kühnapfel U., Krumm H.-G., and Neisius B. A 'virtual reality' based training system for minimally invasive surgery. Proc. Computer Assisted Radiology. CAR'96, Paris, June 1996 (1996) 764-769
59. Kuhnapfel U., Akmak H., and Maa H. Endoscopic surgery training using virtual reality and deformable tissue simulation. Computers and Graphics 24 (2000) 671-682
60. Liu Z., and Bilston L.E. On the viscoelastic character of liver tissue: experiments and modelling of the linear behaviour. Biorheology 37 (2000) 191-201
61. Liu Z., and Bilston L.E. Large deformation shear properties of liver tissue. Biorheology 39 (2002) 735-742
62. Lombardo J.-C., Cani M.-P., and Neyret F. Real-time collision detection for virtual surgery. Computer Animation. Geneva, Switzerland, May 1999 (1999) 82-89
63. Lorensen W., and Cline H.E. Marching cubes: a high resolution 3d surface construction algorithm. ACM Computer Graphics (SIGGRAPH'87) 21 (1987) 163-169
64. Louchet J., Provot X., and Crochemore D. Evolutionary identification of cloth animation model. Workshop on Computer Animation and Simulation. Eurographics'95 (1995) 44-54
65. Lumsdaine A., and Siek J. The Matrix Template Library. http://www.lsc.nd.edu/research/mtl/
66. Macmillan R.H. A new method for the numerical evaluation of determinants. J. Roy. Aeronaut. Soc. 59 772 (1955)
67. Manduca A., Muthupillai R., Rossman P., Greenleaf J., and Ehman L. Visualization of tissue elasticity by magnetic resonance elastography. Proc. of Visualization in Biomedical Imaging. VBC'96, Hamburg, Germany (1996) 63-68
68. Marcus B. Hands on: Haptic feedback in surgical simulation. Proc. of Medicine Meets Virtual Reality IV. MMVR IV, San Diego, CA, January 1996 (1996) 134-139
69. Mark W., Randolph S., Finch M., Van Verth J., and Taylor II R.M. Adding force feedback to graphics systems: Issues and solutions. In: Rushmeier H. (Ed). ACM SIGGRAPH Computer Graphics Annual Conference. SIGGRAPH'96 (1996), Addison-Wesley, Reading, MA 447-452
70. Maurel W., Wu Y., Magnenat Thalmann N., and Thalmann D. Biomechanical Models for Soft Tissue Simulation. ESPRIT Basic Research Series (1998), Springer-Verlag, Berlin
71. Serrano C.M., and Laugier C. Realistic haptic rendering for highly deformable virtual objects. Proc. Int. Conf. on Virtual Reality. Yokohama, Japan, March 2001 (2001)
72. Miller K. Constitutive modelling of abdominal organs. J. Biomech. 33 3 (2000) 367-373
73. Montagnat J., and Delingette H. Globally constrained deformable models for 3d object reconstruction. Signal Processing (1998) 173-186
74. Nava A., Mazza E., Kleinermann F., Avis N., and McClure J. Determination of the mechanical properties of soft human tissues through aspiration experiments. Proc. Conf. on Medical Robotics, Imaging And Computer Assisted Surgery. MICCAI 2003, Montreal, Canada, November 2003. Lecture Notes in Comput. Sci. (2003)
75. Newmark N.M. A method of computation for structural dynamics. J. Engrg. Mech. Division 85 (1959) 67-94
76. O'Mahony A., Williams J., and Katz J. Anisotropic elastic properties of cancellous bone from a human edentulous mandible. Proc. ASME Bioengineering'99 Conference (1999)
77. Owen S. (2000). A survey of unstructured mesh generation technology. Technical report, Department of Civil and Environmental Engineering, Carnegie Mellon University
78. Papademetris X., Shi P., Dione D.P., Sinusas A.J., Constable R.T., and Duncan J.S. Recovery of soft tissue object deformation from 3d image sequences using biomechanical models. XVIth Int. Conf. on Information Processing In Medical Imaging. IPMI'99, Visegrád, Hungary, June 28-July 2, 1999 (1999) 352-357
79. Parthasarathy V.N., Graichen C.M., and Hathaway A.F. A comparison of tetrahedron quality measures. Finite Elements in Analysis and Design 15 (1993) 255-261
80. Picinbono G., Delingette H., and Ayache N. Non-linear and anisotropic elastic soft tissue models for medical simulation. IEEE Int. Conf. Robotics and Automation. ICRA'2001, Seoul, Korea, May 2001 (2001) Best conference paper award
81. Picinbono G., Delingette H., and Ayache N. Non-linear anisotropic elasticity for real-time surgery simulation. Graphical Models 65 5 (2003) 305-321
82. Picinbono G., Lombardo J.-C., Delingette H., and Ayache N. Anisotropic elasticity and forces extrapolation to improve realism of surgery simulation. IEEE Int. Conf. Robotics and Automation. ICRA'2000, San Francisco, USA, April 2000 (2000) 596-602
83. Picinbono G., Lombardo J.-C., Delingette H., and Ayache N. Improving realism of a surgery simulator: linear anisotropic elasticity, complex interactions and force extrapolation. J. Visual. Comput. Animation 13 3 (2002) 147-167
84. Press W.H., Flannery B.P., Teukolsky S.A., and Vetterling W.T. Numerical Recipes in C (1991), Cambridge Univ. Press, Cambridge, UK
85. Press W.H., Flannery B.P., Teukolsky S.A., and Vetterling W.T. Numerical Recipes in FORTRAN: The Art of Scientific Computing. second ed. (1992), Cambridge Univ. Press, Cambridge, UK
86. Puso M.A., and Weiss J.A. Finite element implementation of anisotropic quasi-linear viscoelasticity using a discrete spectrum approximation. ASME J. Biomech. Engrg. 120 1 (1998)
87. Putti M., and Cordes C. Finite element approximation of the diffusion operator on tetrahedra. SIAM J. Scientific Comput. 19 4 (1998) 1154-1168
88. Quarteroni A., Tuveri M., and Veneziani A. Computational vascular fluid dynamics: problems, models and methods. Computing and Visualization in Science 2 (2000) 163-197
89. Radetzky A. The simulation of elastic tissues in virtual medicine using neuro-fuzzy systems. Medical Imaging'98: Image Display. San Diego, CA, February 1998 (1998)
90. Saad Y. Iterative Methods for Sparse Linear Systems (1996), WPS
91. Sakuma I., Nishimura Y., Kong Chui C., Kobayashi E., Inada H., Chen X., and Hisada T. In vitro measurement of mechanical properties of liver tissue under compression and elongation using a new test piece holding method with surgical glue. Int. Symp. on Surgery Simulation and Soft Tissue Modeling. Juan-Les-Pins, France, June 2003. Lecture Notes in Comput. Sci. vol. 2673 (2003), Springer-Verlag, Berlin 284-292
92. Satava R. Medicine 2001: The King Is Dead. Proc. Conf. Virtual Reality in Medicine (1994)
93. Satava R. Medical virtual reality: The current status of the future. Proc. 4th Conf. Medicine Meets Virtual Reality. MMVR IV (1996) 100-106
94. Schroeder W.J., Zarge J., and Lorensen W. Decimation of triangles meshes. Computer Graphics (SIGGRAPH'92) 26 (1992)
95. Sermesant M., Coudière Y., Delingette H., and Ayache N. Progress towards an electro-mechanical model of the heart for cardiac image analysis. IEEE Int. Symp. Biomedical Imaging. ISBI'02 (2002) 10-14
96. Sermesant M., Faris O., Evans F., McVeigh E., Coudière Y., Delingette H., and Ayache N. Preliminary validation using in vivo measures of a macroscopic electrical model of the heart. In: Ayache N., and Delingette H. (Eds). Int. Symp. Surgery Simulation and Soft Tissue Modeling. IS4TM'03. Lecture Notes in Comput. Sci. vol. 2673 (2003), Springer-Verlag, Heidelberg
97. Sillion F.X., Drettakis G., and Bodelet B. Efficient impostor manipulation for real-time visualization of urban scenery. Proc. Eurographics'97. Budapest, Hungary, September 1997 (1997)
98. Simail: product of Simulog S.A. - 1, rue James Joule, 78286 Guyancourt cedex, France, http://www.simulog.fr
99. Soferman Z., Blythe D., and John N. Advanced graphics behind medical virtual reality: Evolution of algorithms, hardware and software interfaces. Proc. IEEE: Special Issue on Surgery Simulation 86 3 (1998) 531-554
100. Soler L., Delingette H., Malandain G., Montagnat J., Ayache N., Clément J.-M., Koehl C., Dourthe O., Mutter D., and Marescaux J. Fully automatic anatomical, pathological and functional segmentation from ct-scans for hepatic surgery. Medical Imaging 2000. San Diego, February 2000 (2000)
101. Soler L., Malandain G., and Delingette H. Segmentation automatique: application aux angioscanners 3d du foie. Traitement du signal 15 5 (1998) 411-431 (in French)
102. Spencer A.J.M. Deformations of Fibre-Reinforced Materials (1972), Clarendon Press, Oxford
103. Spencer A.J.M. Continuum Theory of Fiber-Reinforced Composites (1984), Springer-Verlag, New York
104. Szekely G., Baijka M., and Brechbuhler C. Virtual reality based simulation for endoscopic gynaecology. Proc. Medicine Meets Virtual Reality. MMVR'99, San Francisco, USA (1999) 351-357
105. Teschner M., Heidelberger B., Muller M., Pomeranets D., and Gross M. Optimized spatial hashing for collision detection of deformable objects. Proc. Vision, Modeling, Visualization. VMV'03, Munich, Germany, November 2003 (2003)
106. Vidrascu M., Delingette H., and Ayache N. Finite element modeling for surgery simulation. First MIT Conf. on Computational Fluid and Solid Mechanics (2001)
107. Vlachos A., Peters J., Boyd C., and Mitchell J.L. Curved pn triangles. 2001 ACM Symp. on Interactive 3D Graphics (2001)
108. Weiss J.A., Gardiner J.C., and Quapp K.M. Material models for the study of tissues mechanics. Proc. Int. Conf. on Pelvic and Lower Extremity Injuries. Washington, DC, December 1995 (1995) 249-261
109. Woo M., Neider J., and Davis T. OpenGL Programing Guide (1997), Addison-Wesley, Reading, MA
110. Yamashita Y., and Kubota M. Ultrasonic characterization of tissue hardness in the in-vivo human liver. Proc. IEEE Ultrasonics Symposium (1994) 1449-1453
111. Zorin D., Schroeder P., and Sweldens W. Interpolating subdivision for meshes with arbitrary topology. Proc. 23rd Annual Conf. on Computer Graphics and Interactive Techniques (1996), ACM Press 189-192