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Volumn 410, Issue 43, 2009, Pages 4341-4349

Maximal and minimal representations of gapped and non-gapped motifs of a string

Author keywords

Gap symbol; Maximal motif; Minimal motif; Motif discovery algorithm; NP completeness; Pattern; Sequence motif

Indexed keywords

GAP SYMBOL; MAXIMAL MOTIF; MINIMAL MOTIF; MOTIF DISCOVERY ALGORITHM; NP-COMPLETENESS; PATTERN; SEQUENCE MOTIF;

EID: 67649640546     PISSN: 03043975     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tcs.2009.07.015     Document Type: Article
Times cited : (20)

References (14)
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  • 2
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  • 3
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    • A polynomial space and polynomial delay algorithm for enumeration of maximal motifs in a sequence
    • Proc. ISAAC 2005, Springer
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    • Arimura, H.1    Uno, T.2
  • 6
    • 80052710996 scopus 로고    scopus 로고
    • Suffix tree characterization of maximal motifs in biological sequences
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  • 9
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    • On the complexity of finding gapped motifs
    • Submitted manuscript
    • M. Michael, F. Nicolas, E. Ukkonen, On the complexity of finding gapped motifs, Submitted manuscript 2007
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  • 10
    • 0033886876 scopus 로고    scopus 로고
    • Pattern discovery on character sets and real-valued data: Linear bound on irredundant motifs and efficient polynomial time algorithm
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    • (2000) Proc. 11th SIAM Symposium on Discrete algorithms, SODA'00 , pp. 297-308
    • Parida, L.1    Rigoutsos, I.2    Floratos, A.3    Platt, D.4    Gao, Y.5
  • 11
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    • An output-sensitive flexible pattern discovery algorithm
    • Proc. CPM 2001, Springer
    • Parida L., Rigoutsos I., and Platt D.E. An output-sensitive flexible pattern discovery algorithm. Proc. CPM 2001. LNCS vol. 2089 (2001), Springer 131-142
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  • 13
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    • A basis of tiling motifs for generating repeated patterns and its complexity for higher quorum
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    • Pisanti, N.1    Crochemore, M.2    Grossi, R.3    Sagot, M.-F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.