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Volumn 76, Issue 5, 2009, Pages 677-682

Autotrophic denitrification in nitrate-induced marine sediment remediation and Sulfurimonas denitrificans-like bacteria

Author keywords

Autotrophic; Marine sediment; Nitrate reduction; Sulfide oxidation; Sulfurimonas denitrificans

Indexed keywords

BACTERIA; CLONE CELLS; CLONING; DENITRIFICATION; SEDIMENTS; SUBMARINE GEOLOGY; SULFUR COMPOUNDS;

EID: 67649491364     PISSN: 00456535     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.chemosphere.2009.03.066     Document Type: Article
Times cited : (88)

References (42)
  • 2
    • 0032456296 scopus 로고    scopus 로고
    • Molecular phylogenetic analysis of a bacterial community in Sulphur River, Parker Cave, Kentucky
    • Angert E.R., Northup D.E., Reysenbach A.L., Peek A.S., Goebel B.M., and Pace N.R. Molecular phylogenetic analysis of a bacterial community in Sulphur River, Parker Cave, Kentucky. Am. Mineral. 83 (1998) 1583-1592
    • (1998) Am. Mineral. , vol.83 , pp. 1583-1592
    • Angert, E.R.1    Northup, D.E.2    Reysenbach, A.L.3    Peek, A.S.4    Goebel, B.M.5    Pace, N.R.6
  • 3
    • 67649531674 scopus 로고    scopus 로고
    • American Public Health Association, Washington DC
    • APHA. Standard Methods for the Examination of Water and Wastewater. 20th ed (1998), American Public Health Association, Washington DC
    • (1998) 20th ed
    • APHA1
  • 4
    • 0018200348 scopus 로고
    • Autotrophic denitrification using elemental sulphur
    • Batchelor B., and Lawrence A.W. Autotrophic denitrification using elemental sulphur. J. Water Pollut. Control Fed. 50 (1978) 1986-2001
    • (1978) J. Water Pollut. Control Fed. , vol.50 , pp. 1986-2001
    • Batchelor, B.1    Lawrence, A.W.2
  • 5
    • 0038369933 scopus 로고    scopus 로고
    • Biodiversity, community structural shifts, and biogeography of prokaryotes within Antarctic continental shelf sediment
    • Bowman J.P., and McCuaig R.D. Biodiversity, community structural shifts, and biogeography of prokaryotes within Antarctic continental shelf sediment. Appl. Environ. Microbiol. 69 (2003) 2463-2483
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 2463-2483
    • Bowman, J.P.1    McCuaig, R.D.2
  • 6
    • 0026330304 scopus 로고
    • 2S-oxidation as motor of denitrification at the oxic-anoxic interface
    • 2S-oxidation as motor of denitrification at the oxic-anoxic interface. Mar. Ecol. - Prog. Ser. 77 (1991) 157-169
    • (1991) Mar. Ecol. - Prog. Ser. , vol.77 , pp. 157-169
    • Brettar, I.1    Rheinheimer, G.2
  • 7
    • 0027079806 scopus 로고
    • Influence of carbon availability on denitrification in the water column of the central Baltic
    • Brettar I., and Rheinheimer G. Influence of carbon availability on denitrification in the water column of the central Baltic. Limnol. Oceanogr. 37 (1992) 1146-1163
    • (1992) Limnol. Oceanogr. , vol.37 , pp. 1146-1163
    • Brettar, I.1    Rheinheimer, G.2
  • 8
    • 33144487676 scopus 로고    scopus 로고
    • Identification of a Thiomicrospira denitrificans-like Epsilonproteobacterium as a catalyst for autotrophic denitrification in the central Baltic sea
    • Brettar I., Labrenz M., Flavier S., Botel J., Kuosa H., Christen R., and Hofle M.G. Identification of a Thiomicrospira denitrificans-like Epsilonproteobacterium as a catalyst for autotrophic denitrification in the central Baltic sea. Appl. Environ. Microbiol. 72 (2006) 1364-1372
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 1364-1372
    • Brettar, I.1    Labrenz, M.2    Flavier, S.3    Botel, J.4    Kuosa, H.5    Christen, R.6    Hofle, M.G.7
  • 9
    • 0035909781 scopus 로고    scopus 로고
    • Proteobacterial diversity from a deep-sea hydrothermal vent on the Mid-Atlantic Ridge
    • Corre E., Reysenbach A.L., and Prieur D. Proteobacterial diversity from a deep-sea hydrothermal vent on the Mid-Atlantic Ridge. FEMS Microbiol. Lett. 205 (2001) 329-335
    • (2001) FEMS Microbiol. Lett. , vol.205 , pp. 329-335
    • Corre, E.1    Reysenbach, A.L.2    Prieur, D.3
  • 11
    • 0030175494 scopus 로고    scopus 로고
    • Degradation of phenol in wastewater in an upflow anaerobic sludge blanket reactor
    • Fang H.H.P., Chen T., Li Y.Y., and Chui H.K. Degradation of phenol in wastewater in an upflow anaerobic sludge blanket reactor. Water Res. 30 (1996) 1353-1360
    • (1996) Water Res. , vol.30 , pp. 1353-1360
    • Fang, H.H.P.1    Chen, T.2    Li, Y.Y.3    Chui, H.K.4
  • 12
    • 38949083490 scopus 로고    scopus 로고
    • Predictions of nitrate diffusion in sediment using horizontal attenuated total reflection (HATR) by Fourier transform infrared (FTIR) spectrometry
    • Fang H.H.P., Zhang M., Zhang T., and Chen J. Predictions of nitrate diffusion in sediment using horizontal attenuated total reflection (HATR) by Fourier transform infrared (FTIR) spectrometry. Water Res. 42 (2008) 903-908
    • (2008) Water Res. , vol.42 , pp. 903-908
    • Fang, H.H.P.1    Zhang, M.2    Zhang, T.3    Chen, J.4
  • 13
    • 0000461280 scopus 로고
    • Confidence limits of phylogenies: an approach using the bootstrap
    • Felsenstein J. Confidence limits of phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 14
    • 0034041256 scopus 로고    scopus 로고
    • Isolation and characterization of strains CVO and FWKO B, two novel nitrate-reducing, sulfide-oxidizing bacteria isolated from oil field brine
    • Gevertz D., Telang A.J., Voordouw G., and Jenneman G.E. Isolation and characterization of strains CVO and FWKO B, two novel nitrate-reducing, sulfide-oxidizing bacteria isolated from oil field brine. Appl. Environ. Microbiol. 66 (2000) 2491-2501
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2491-2501
    • Gevertz, D.1    Telang, A.J.2    Voordouw, G.3    Jenneman, G.E.4
  • 15
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Sym. Ser. 41 (1999) 95-98
    • (1999) Nucleic Acids Sym. Ser. , vol.41 , pp. 95-98
    • Hall1
  • 16
    • 0037375056 scopus 로고    scopus 로고
    • Bacterial diversity in a subseafloor habitat following a deep-sea volcanic eruption
    • Huber J., Butterfield D.A., and Baross J.A. Bacterial diversity in a subseafloor habitat following a deep-sea volcanic eruption. FEMS Microbiol. Ecol. 43 (2003) 393-409
    • (2003) FEMS Microbiol. Ecol. , vol.43 , pp. 393-409
    • Huber, J.1    Butterfield, D.A.2    Baross, J.A.3
  • 17
    • 0031935382 scopus 로고    scopus 로고
    • Effect of nitrate-based bioremediation on contaminant distribution and sediment toxicity-column study
    • Hutchins S.R., Bantle J.A., and Schrock E.J. Effect of nitrate-based bioremediation on contaminant distribution and sediment toxicity-column study. Environ. Toxicol. Chem. 17 (1998) 349-361
    • (1998) Environ. Toxicol. Chem. , vol.17 , pp. 349-361
    • Hutchins, S.R.1    Bantle, J.A.2    Schrock, E.J.3
  • 18
    • 0345328152 scopus 로고    scopus 로고
    • Sulfurimonas autotrophica gen. nov., sp. nov., a novel sulfur-oxidizing epsilon-Proteobacteria isolated from hydrothermal sediments in the Mid-Okinawa Trough
    • Inagaki F., Takai K., Kobayashi H., Nealson K., and Horikoshi H.K. Sulfurimonas autotrophica gen. nov., sp. nov., a novel sulfur-oxidizing epsilon-Proteobacteria isolated from hydrothermal sediments in the Mid-Okinawa Trough. Int. J. Syst. Evol. Microbiol. 53 (2003) 1801-1805
    • (2003) Int. J. Syst. Evol. Microbiol. , vol.53 , pp. 1801-1805
    • Inagaki, F.1    Takai, K.2    Kobayashi, H.3    Nealson, K.4    Horikoshi, H.K.5
  • 20
    • 9744249395 scopus 로고    scopus 로고
    • Sulfuricurvum kujiense gen. nov., sp. nov., a facultatively anaerobic, chemolithoautotrophic, sulfur-oxidizing bacterium isolated from an underground crude-oil storage cavity
    • Kodama Y., and Watanabe K. Sulfuricurvum kujiense gen. nov., sp. nov., a facultatively anaerobic, chemolithoautotrophic, sulfur-oxidizing bacterium isolated from an underground crude-oil storage cavity. Int. J. Syst. Evol. Microbiol. 54 (2004) 2297-2300
    • (2004) Int. J. Syst. Evol. Microbiol. , vol.54 , pp. 2297-2300
    • Kodama, Y.1    Watanabe, K.2
  • 21
    • 12344332673 scopus 로고    scopus 로고
    • Microbial community and biochemistry process in autosulfurotrophic denitrifying biofilm
    • Koenig A., Zhang T., Liu L.H., and Fang H.H.P. Microbial community and biochemistry process in autosulfurotrophic denitrifying biofilm. Chemosphere 58 (2005) 1041-1047
    • (2005) Chemosphere , vol.58 , pp. 1041-1047
    • Koenig, A.1    Zhang, T.2    Liu, L.H.3    Fang, H.H.P.4
  • 23
    • 0031756043 scopus 로고    scopus 로고
    • Antarctobacter heliothermus gen. nov., sp. nov., a budding bacterium from hypersaline and heliothermal Ekho Lake
    • Labrenz M., Collins M.D., Lawson P.A., Tindall B.J., Braker G., and Hirsch P. Antarctobacter heliothermus gen. nov., sp. nov., a budding bacterium from hypersaline and heliothermal Ekho Lake. Int. J. Syst. Bacteriol. 48 (1998) 1336-1372
    • (1998) Int. J. Syst. Bacteriol. , vol.48 , pp. 1336-1372
    • Labrenz, M.1    Collins, M.D.2    Lawson, P.A.3    Tindall, B.J.4    Braker, G.5    Hirsch, P.6
  • 24
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Stackebrandt E., and Goodfellow M. (Eds), Wiley, Chichester, UK
    • Lane D.J. 16S/23S rRNA sequencing. In: Stackebrandt E., and Goodfellow M. (Eds). Nucleic Acid Techniques in Bacterial Systematic (1991), Wiley, Chichester, UK 115-175
    • (1991) Nucleic Acid Techniques in Bacterial Systematic , pp. 115-175
    • Lane, D.J.1
  • 25
    • 0027478696 scopus 로고
    • Transfer of Thiosphaera pantotropha to Paracoccus denitrificans
    • Ludwig W., Mittenhuber G., and Friedrich C.G. Transfer of Thiosphaera pantotropha to Paracoccus denitrificans. Int. J. Syst. Bacteriol. 43 (1993) 363-367
    • (1993) Int. J. Syst. Bacteriol. , vol.43 , pp. 363-367
    • Ludwig, W.1    Mittenhuber, G.2    Friedrich, C.G.3
  • 27
    • 0035318078 scopus 로고    scopus 로고
    • Phylogenetic diversity of bacterial and archaeal communities in the anoxic zone of the Cariaco Basin
    • Madrid V.M., Taylor G.T., Scranton M.I., and Chistoserdov A.Y. Phylogenetic diversity of bacterial and archaeal communities in the anoxic zone of the Cariaco Basin. Appl. Environ. Microbiol. 67 (2001) 1663-1674
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 1663-1674
    • Madrid, V.M.1    Taylor, G.T.2    Scranton, M.I.3    Chistoserdov, A.Y.4
  • 29
    • 0028976424 scopus 로고
    • Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii
    • Moyer C.L., Dobbs F.C., and Karl D.M. Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii. Appl. Environ. Microbiol. 61 (1995) 1555-1562
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1555-1562
    • Moyer, C.L.1    Dobbs, F.C.2    Karl, D.M.3
  • 31
    • 0029097821 scopus 로고
    • Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments
    • Muyzer G., Teske A., Wirsen C., and Jannasch H. Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments. Arch. Microbiol. 164 (1995) 165-172
    • (1995) Arch. Microbiol. , vol.164 , pp. 165-172
    • Muyzer, G.1    Teske, A.2    Wirsen, C.3    Jannasch, H.4
  • 32
    • 18444397753 scopus 로고    scopus 로고
    • Succession of internal sulfur cycles and sulfur-oxidizing bacterial communities in microaerophilic wastewater biofilms
    • Okabe S., Ito T., Sugita K., and Satoh H. Succession of internal sulfur cycles and sulfur-oxidizing bacterial communities in microaerophilic wastewater biofilms. Appl. Environ. Microbiol. 71 (2005) 2520-2529
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 2520-2529
    • Okabe, S.1    Ito, T.2    Sugita, K.3    Satoh, H.4
  • 34
    • 0033823565 scopus 로고    scopus 로고
    • Novel bacterial and archaeal lineages from an in situ growth chamber deployed at a Mid-Atlantic Ridge hydrothermal vent
    • Reysenbach A.L., Longnecker K., and Kirshtein J. Novel bacterial and archaeal lineages from an in situ growth chamber deployed at a Mid-Atlantic Ridge hydrothermal vent. Appl. Environ. Microbiol. 66 (2000) 3798-3806
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3798-3806
    • Reysenbach, A.L.1    Longnecker, K.2    Kirshtein, J.3
  • 35
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for constructing phylogenetic trees
    • Satio N., and Nei M. The neighbor-joining method: a new method for constructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Satio, N.1    Nei, M.2
  • 36
    • 49549142424 scopus 로고
    • A new type of thiosulphate oxidizing, nitrate reducing microorganism: Thiomicrospira denitrificans sp. nov.
    • Timmer-Ten-Hoor A. A new type of thiosulphate oxidizing, nitrate reducing microorganism: Thiomicrospira denitrificans sp. nov. Neth. J. Sea Res. 9 (1975) 344-350
    • (1975) Neth. J. Sea Res. , vol.9 , pp. 344-350
    • Timmer-Ten-Hoor, A.1
  • 37
    • 0019521333 scopus 로고
    • Cell yield and bioenergetics of Thiomicrospira denitrificans compared with Thiobacillus denitrificans
    • Timmer-ten-Hoor A. Cell yield and bioenergetics of Thiomicrospira denitrificans compared with Thiobacillus denitrificans. Anton. Leeuw. Int. J. Gen. 47 (1981) 231-243
    • (1981) Anton. Leeuw. Int. J. Gen. , vol.47 , pp. 231-243
    • Timmer-ten-Hoor, A.1
  • 39
    • 0033759661 scopus 로고    scopus 로고
    • Molecular characterization of bacterial populations in petroleum-contaminated groundwater discharged from underground crude oil storage cavities
    • Watanabe K., Watanabe K., Kodama Y., Syutsubo K., and Harayama S. Molecular characterization of bacterial populations in petroleum-contaminated groundwater discharged from underground crude oil storage cavities. Appl. Environ. Microbiol. 66 (2000) 4803-4809
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4803-4809
    • Watanabe, K.1    Watanabe, K.2    Kodama, Y.3    Syutsubo, K.4    Harayama, S.5
  • 41
    • 0000348749 scopus 로고    scopus 로고
    • Toxicity of intertidal and subtidal sediments contained by the Exxon Valdez spill
    • Rice S.D., Spies R.B., Wolfe D.A., and Wright B.W. (Eds), American Fisheries Society Symposium, Bethesda, MD
    • Wolfe D.A., Krahn M.M., Casillas E., Sol S., Thompson T.A., Lunz J., and Scott K.J. Toxicity of intertidal and subtidal sediments contained by the Exxon Valdez spill. In: Rice S.D., Spies R.B., Wolfe D.A., and Wright B.W. (Eds). Proceedings of the Symposium Exxon Valdez Oil Spill, vol. 18 (1996), American Fisheries Society Symposium, Bethesda, MD 121-139
    • (1996) Proceedings of the Symposium Exxon Valdez Oil Spill, vol. 18 , pp. 121-139
    • Wolfe, D.A.1    Krahn, M.M.2    Casillas, E.3    Sol, S.4    Thompson, T.A.5    Lunz, J.6    Scott, K.J.7
  • 42
    • 0034788847 scopus 로고    scopus 로고
    • Phylogenetic diversity of a SRB-rich marine biofilm
    • Zhang T., and Fang H.H.P. Phylogenetic diversity of a SRB-rich marine biofilm. Appl. Microbiol. Biot. 57 (2001) 437-440
    • (2001) Appl. Microbiol. Biot. , vol.57 , pp. 437-440
    • Zhang, T.1    Fang, H.H.P.2


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