Spatiotemporal variation of bacterial assemblages in a shallow subtropical coastal lagoon in Southern Brazil

Microbial Ecology

Volumn 58, Issue 1, 2009, Pages 140-152

  Fontes, Maria Luiza Schmitz ^a   Abreu, Paulo C ^a  

^a FEDERAL UNIVERSITY OF RIO GRANDE   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS); CYANOBACTERIA;

CHLOROPHYLL; CHLOROPHYLL A; FRESH WATER; OXYGEN;

ARTICLE; BACTERIUM; BIOMASS; BRAZIL; ECOSYSTEM; HETEROTROPHY; ISOLATION AND PURIFICATION; LIGHT; MICROBIOLOGY; PRINCIPAL COMPONENT ANALYSIS; SALINITY; SEASON; TEMPERATURE;

BACTERIA; BIOMASS; BRAZIL; CHLOROPHYLL; ECOSYSTEM; FRESH WATER; HETEROTROPHIC PROCESSES; LIGHT; OXYGEN; PRINCIPAL COMPONENT ANALYSIS; SALINITY; SEASONS; TEMPERATURE; WATER MICROBIOLOGY;

EID: 67649174177     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-008-9454-z     Document Type: Article

References (63)

1. Abreu PC, Biddanda BB, Odebrecht C (1992) Bacterial dynamics of the Patos Lagoon estuary, Southern Brazil (32° S; 52° W): relationship with phytoplankton production and suspended material. Estuar Coast Shelf Sci 35:621-635.
2. Abreu PC, Granéli HW, Odebrecht C (1995) Produção fitoplanctônica e bacteriana naregião da pluma estuarina da Lagoa dos Patos-RS, Brasil. Atlântica 17:35-52.
3. Azam F, Fenchel T, Gray JG, Meyer-Reil LA, Thingstad T (1983) The ecological role of water-column microbes in the sea. Mar Ecol Prog Ser 10:257-263.
4. Bergondo DL, Kester DR, Stoffel HE, Woods WL (2005) Time-series observations during the low sub-surface oxygen events in Narragansett Bay during summer 2001. Mar Chem 97:90-103.
5. Berman T, Parparov A, Yacobi YZ (2004) Planktonic community production and respiration and the impact of bacteria on carbon cycling in the photic zone of Lake Kinneret. Aquat Microb Ecol 34:43-55.
6. Borsuk ME, Stow CA, Luettich RA, Paerl HW, Pinckney JL (2001) Modelling oxygen dynamics in an intermittently stratified estuary: estimation of process rates using field data. Estuar Coast Shelf Sci 52:33-49.
7. Bouvier T, del Giorgio PA (2007) Key role of selective viral-induced mortality in determining marine bacterial community composition. Environ Microbiol 9:287-297.
8. Breitbart M, Middelboe M, Rohwer F (2008) Marine viruses: community dynamics, diversity and impact on microbial processes. In: Kirchman DL (ed) Microbial ecology of the oceans. 2nd edn. Wiley, Hoboken, NJ, pp 443-481.
9. Caron DA (1994) Inorganic nutrients, bacteria, and the microbial loop. Microb Ecol 28:295-298.
10. Castel J, Caumette P, Herbert R (1996) Eutrophication gradients in coastal lagoons as exemplified by the Bassin d' Arcachon and the Étang du Prévost. Hydrobiologia 329:9-27.
11. Cotner JB, Biddanda BA (2002) Small players, large role: microbial influence on biogeochemical processes in pelagic aquatic ecosystems. Ecosystems 5:105-121.
12. Cottrell MT, Kirchman DL (2004) Single-cell analysis of bacterial growth, cell size, and community structure in the Delaware estuary. Aquat Microb Ecol 34:139-149.
13. Crump BC, Peranteau C, Beckingham B, Cornwel JC (2007) Respiratory succession and community succession of bacterioplankton in seasonally anoxic estuarine waters. Appl Environ Microbiol 73:6802-6810.
14. Diaz RJ, Rosenberg R (1995) Marine benthic hypoxia: a review of its ecological effects and the behavioral responses of benthic macrofauna. Oceanogr Mar Biol 33:245-303.
15. Fonseca AL, Braga ES (2006) Temporal dynamic of the dissolved nutrients and the eutrophization processes in a Southern Brazilian coastal lagoon, Conceição Lagoon. J Coast Res 39:1229-1233.
16. Fonseca AL (2006) Effects of urban drainage on the physico-chemical and biological characteristics of surface water in Conceição Lagoon (Florianópolis, SC, Brazil). Biotemas 19:7-16.
17. Fontes MLS, Cavellucci R, Laurenti A, Machado EC, Camargo MG, Brandini N (2006) Detection of environmental impact on variations in dissolved nutrients and Chl-a in the Conceição Lagoon, Florianópolis, SC, Brazil. J Coast Res 39:1407-1412.
18. Goldman JC, Caron DA, Dennett MR (1987) Regulation of gross growth efficiency and ammonium regeneration in bacteria by substrate C:N ratio. Limnol Oceanogr 32:1239-1252.
19. Gonzalez AM, Paranhos R, Lutterbach MS (2006) Heterotrophic bactéria abundances in Rodrigo de Freitas Lagoon (Rio de Janeiro, Brazil). Braz J Microbiol 37:428-433.
20. Grasshoff K, Ehrhardt M, Kremling K (1999) Methods of seawater analysis, 3rd edn. Wiley-VCH, New York, pp 159-228.
21. Hahn MW, Hofle MG (2001) Grazing of protozoa and its effect on populations of aquatic bacteria. FEMS Microbiol Ecol 35:113-121.
22. Harrison WG, Wood LJE (1988) Inorganic nitrogen uptake by marine picoplankton: evidence for size partitioning. Limnol Oceanogr 33:468-475.
23. Heijs SK, Azzoni R, Giordani G, Jonkers HM, Nizzoli D, Viaroli P, van-Gemerden H (2000) Sulfide-induced release of phosphate from sediments of coastal lagoons and the possible relation to the disappearance of Ruppia sp. Aquat Microb Ecol 23:85-95.
24. Hobbie JE, Daley RJ, Jasper J (1977) Use of Nucleopore filters for counting bacteria by fluorescence microscopy. Appl Environ Microbiol 33:1225-1228.
25. Holmes RW (1970) The Secchi disk in turbid coastal waters. Limnol Oceanogr 15:688-694.
26. Jürgens K, Güde H (1994) The potential importance of grazing-resistant bacteria in planktonic systems. Mar Ecol Prog Ser 112:169-188.
27. Kirchman DL (1994) The uptake of inorganic nutrients by heterotrophic bacteria. Microb Ecol 28:255-271.
28. Kirchman DL (2000) Uptake and regeneration of inorganic nutrients by marine heterotrophic bacteria. In: Kirchman DL (ed) Microbial ecology of the oceans. Wiley-Liss, New York, pp 261-288.
29. Kirk JTO (1983) Light and photosynthesis in aquatic ecosystem. Cambridge University Press, Cambridge, pp 38-39.
30. Kjerfve B (1986) Comparative oceanography of coastal lagoons. In: Wolf DA (ed) Estuarine variability. Academic, New York, pp 63-81.
31. Knoppers BA, Opitz SS, Souza MP, Miguez CF (1984) The spatial distribution of particulate organic matter and some physical and chemical water properties in Conceição Lagoon; Santa Catarina, Brazil (July 19, 1982). Braz Arch Biol Technol 27:59-77.
32. Lutterbach MTS, Vasquez JC, Pinet JA, Andreata JV, da Silva AC (2001) Monitoring and spatial distribution of heterotrophic bacteria and fecal coliforms in the Rodrigo de Freitas Lagoon, Rio de Janeiro. Braz Arch Biol Technol 44:7-13.
33. Lymer D, Lindstro ES, Vrede K (2008) Variable importance of viral-induced bacterial mortality along gradients of trophic status and humic content in lakes. Freshw Biol 53:1101-1113.
34. Kolm HE, Andretta L (2003) Bacterioplankton in different tides of the Pereque tidal creek, Pontal do Sul, Parana, Brazil. Braz J Microbiol 34:97-103.
35. McCree KJ (1981) Photosynthetically active radiation. In: Lange OL, Nobel P, Osmond B, Ziegler H (eds) Physiological plant ecology, vol. 12A, encyclopedia of plant physiology (new series). Springer, Berlin, pp 41-55.
36. Maclsaac EA, Stockner JG (1993) Enumeration of phototrophic picoplankton by autofluorescence. In: Kemp PF, Sherr BF, Sherr EB, Cole (eds) Handbook of methods in aquatic microbial ecology. Lewis, Boca Raton, FL, pp 187-197.
37. Mainly BFJ (1995) Multivariate statistical methods: a primer, 2nd edn. Chapman & Hall, London, pp 76-92.
38. Massana R, Gasol JM, Bjornsen PK, Blackburn N, Hagström A, Hietanen S, Hygum BH, Kuparinen J, Pedrós-Alió C (1997) Measurement of bacterial size via image analysis of epifluorescence preparations: description of an inexpensive system and solutions to some of the most common problems. Sci Mar 61:397-407.
39. McCarthy MJ, McNeal KS, Morse JW, Gardner WS (2008) Bottom-water hypoxia effects on sediment-water interface nitrogen transformations in a seasonally hypoxic, shallow bay (Corpus Christi Bay, TX, USA). Estuaries and Coasts 31:521-531.
40. Miller DC, Poucher SL, Coiro L (2002) Determination of lethal dissolved oxygen levels for selected marine and estuarine fishes, crustaceans and a bivalve. Mar Biol 140:287-296.
41. Moebus K (1992) Further investigations on the concentration of marine bacteriophages in the water around Helgoland, with reference to the phage-host systems encountered. Helgol Meeresunters 46:275-292.
42. Muehe D, Gomes FC Jr (1989) Batimetria e algumas considerações sobre a evolução geológica da Lagoa da Conceição, Ilha de Santa Catarina. Geosul 49:32-44.
43. Muylaert K, van der Gucht K, Vloemans N, de Meester L, Gillis M, Vyverman W (2002) Relationship between bacterial community composition and bottom-up versus top-down variables in four eutrophic shallow lakes. Appl Environ Microbiol 68:4740-4750.
44. Nixon SW (1995) Coastal marine eutrophication: definition, social causes, and future concerns. Ophelia 41:199-219.
45. Odebrecht C (1988) Variações espaciais e sazonais do fitoplâncton, protozooplâncton e metazooplâncton na Lagoa da Conceição, Ilha de Santa Catarina, Brasil. Atlântica 10:21-40.
46. Odebrecht C, Gomes FC Jr (1987) Hidrografia e matéria particulada em suspensão na Lagoa da Conceição, ilha de Santa Catarina, SC, Brasil. Atlântica 9:83-104.
47. Ovreas L, Bourne D, Sandaa RA, Casamayor EO, Benlloch S, Goddard V, Smerdon G, Heldal M, Thingstad TF (2003) Response of bacterial and viral communities to nutrient manipulations in seawater mesocosms. Aquat Microb Ecol 31:109-121.
48. Pace ML, Cole JJ (1994) Comparative and experimental approaches to top-down and bottom-up regulation of bacteria. Microb Ecol 28:181-193.
49. Pernthaler J, Zollner E, Warnecke F, Jurgens K (2004) Bloom of filamentous bacteria in a mesotrophic lake: identity and potential controlling mechanism. Appl Environ Microbiol 70:6272-6281.
50. Psenner R, Sommaruga R (1992) Are rapid changes in bacterial biomass caused by shifts from top-down to bottom-up control? Limnol Oceanogr 37:1092-1100.
51. Sierra de Ledo B, Soriano-Sierra EJ (1994) Atributos e processos condicionantes da hidrodinâmica na Lagoa da Conceição, Ilha de Santa Catarina, Brasil. ACIESP 2:113-121.
52. Sokal RR, Rohlf FJ (1995) Biometry: the principles and practice of statistics in biological research, 3rd edn. Freeman, New York, pp 555-608.
53. Sokoletsky L (2003) In situ and remote sensing bio-optical methods for the estimation of phytoplankton concentration in the Gulf of Aqaba (Eilat). Bar-Ilan University, p 240.
54. Stein ML (1999) Interpolation of spatial data: some theory for kriging. Springer series in statistics. Springer, New York, p 243.
55. Strickland JDH, Parsons TR (1972) A practical handbook of seawater analysis, bulletin 167, 2nd edn. Fisheries Research Board of Canada, Ottawa, p 310.
56. Tijdens M, van de Waal DB, Slovackova H, Hoogveld HL, Gons HJ (2008) Estimates of bacterial and phytoplankton mortality caused by viral lysis and microzooplankton grazing in a shallow eutrophic lake. Freshw Biol 53:1126-1141.
57. Underwood AJ (1997) Experiments in ecology: their logic design and interpretation using analysis of variance. Cambridge University Press, Cambridge, UK, pp 140-197.
58. Vacelet E, Arnoux A, Thomassin BA, Travers M (1999) Influence of freshwater and terrigenous material on nutrients, bacteria and phytoplankton in a high island lagoon: Mayotte, Comoro Archipelago, Indian Ocean. Hydrobiologia 380:165-178.
59. Weinbauer MG, Hornak K, Jezbera J, Nedoma J, Dolan JR, Simek K (2007) Synergistic and antagonistic effects of viral lysis and protistan grazing on bacterial biomass, production and diversity. Environ Microbiol 9:777-788.
60. Welschmeyer NA (1994) Fluorometric analysis of chlorophyll a in the presence of chlorophyll b and phaeopigments. Limnol Oceanogr 39:1985-1992.
61. Wheeler PA, Kirchman D (1986) Utilization of inorganic and organic nitrogen by bacteria in marine systems. Limnol Oceanogr 31:998-1009.
62. Wommack K, Colwell R (2000) Virioplankton: viruses in aquatic ecosystems. Microbiol Mol Biol Rev 64:69-114.
63. Zhang R, Weinbauer MG, Qian PY (2007) Viruses and flagellates sustain apparent richness and reduce biomass accumulation of bacterioplankton in coastal marine waters. Environ Microbiol 9:3008-3018.