Two-dimensional crystallisation of soluble protein complexes

Methods in Molecular Biology

Volumn 543, Issue , 2009, Pages 353-367

  Schultz, Patrick ^a   Crucifix, Corinne ^a   Lebeau, Luc ^a  

^a INSTITUT DE GÉNÉTIQUE ET DE BIOLOGIE MOLÉCULAIRE ET CELLULAIRE   (France)

Author keywords

2 D crystals; High resolution electron microscopy; Nucleoprotein complexes; Protein complexes; Self assembly

Indexed keywords

DNA; DNA DIRECTED RNA POLYMERASE; LIPID; PROTEIN; STREPTAVIDIN;

ARTICLE; CHEMISTRY; CRYSTALLIZATION; ELECTRON MICROSCOPY; METABOLISM; METHODOLOGY; SOLUBILITY; ULTRASTRUCTURE;

CRYSTALLIZATION; DNA; DNA-DIRECTED RNA POLYMERASES; LIPIDS; MICROSCOPY, ELECTRON; PROTEINS; SOLUBILITY; STREPTAVIDIN;

EID: 67649112274     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-60327-015-1_22     Document Type: Article

References (24)

1. Henderson, R., Baldwin, J.M., Ceska, T.A., Zemlin, F., Beckmann, E., and Downing, K.H. (1990). Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy. J. Mol. Biol. 213, 899-929. (Pubitemid 20213224)
2. Kuhlbrandt, W., Wang, D.N., and Fujiyoshi, Y. (1994). Atomic model of plant light-harvesting complex by electron crystallography. Nature. 367, 614-621. (Pubitemid 24067701)
3. Amos, L.A., Henderson, R., and Unwin, P.N. Three-dimensional structure determination by electron microscopy of two-dimensional crystals. Prog. Biophys. Mol. Biol. 39, 183-231.
4. van Heel, M., Gowen, B., Matadeen, R., Orlova, E.V., Finn, R., Pape, T., Cohen, D., Stark, H., Schmidt, R., Schatz, M., and Pat-wardhan, A. (2000). Single-particle electron cryo-microscopy: towards atomic resolution. Q. Rev. Biophys. 33, 307-369. (Pubitemid 32151706)
5. Frank, J. (2002). Single-particle imaging of macromolecules by cryo-electron microscopy. Annu. Rev. Biophys. Biomol. Struct. 31, 303-319. (Pubitemid 34666835)
6. Uzgiris, E.E., and Kornberg, R.D. (1983). Two-dimensional crystallization technique for imaging macromolecules, with application to antigen-antibody- complement complexes. Nature. 301, 125-129. (Pubitemid 13158765)
7. Schultz, P., Celia, H., Riva, M., Darst, S.A., Colin, P., Kornberg, R.D., Sentenac, A., and Oudet, P. (1990). Structural study of the yeast RNA polymerase A. Electron microscopy of lipid-bound molecules and two-dimensional crystals. J. Mol. Biol. 216, 353-362.
8. Darst, S.A., Ribi, H.O., Pierce, D.W., and Kornberg, R.D. (1988). Two-dimensional crystals of Escherichia coli RNA polymerase holoenzyme on positively charged lipid layers. J. Mol. Biol. 203, 269-273.
9. Lebeau, L., Regnier, E., Schultz, P., Wang, J.C., Mioskowski, C., and Oudet, P. (1990). Two-dimensional crystallization of DNA gyrase B subunit on specifically designed lipid monolayers. FEBS Lett. 267, 38-42. (Pubitemid 20211695)
10. Ribi, H.O., Reichard, P., and Kornberg, R.D. (1987) Two-dimensional crystals of enzyme-effector complexes: ribonucleotide reduct-ase at 18-A resolution. Biochemistry. 26, 7974-7979.
11. Avila-Sakar, A.J., and Chiu, W. (1996). Visualization of beta-sheets and side-chain clusters in two-dimensional periodic arrays of strepta-vidin on phospholipid monolayers by electron crystallography [published erratum appears in Biophys. J. 71, 517]. Biophys. J. 70, 57-68.
12. Lebeau, L., Schultz, P., Célia, H., Mésini, P., Nuss, S., Klinger, C., Olland, S., Oudet, P., and Nioskowski, C. (1996). Specifically designed lipid assemblies as tools for two-dimensional crystallization of soluble macromolecules, in Handbook of Nonmedical Applications of Liposomes 11 ( Barenllolz, Y. and Lasic, D.D., eds.) CRC Press, Boca Raton, pp. 133-186.
13. Darst, S.A., Ahlers, M., Meller, P.H., Kubalek, E.W., Blankenburg, R., Ribi, H.O., Ringsdrof, H., and Kornberg, R.D. (1991). Two-dimensional crystals of streptavidin on bioti-nylated lipid layers and their interactions with biotinylated macromolecules. Biophys. J. 59, 387-396.
14. Celia, H., Jontes, J.D., Whittaker, M., and Milligan, R.A. (1996). Two-dimensional crystallization of brush border myosin I. J. Struct. Biol. 117, 236-241. (Pubitemid 27064406)
15. Venien-Bryan, C., Balavoine, F., Toussaint, B., Mioskowski, C., Hewat, E.A., Helme, B., and Vignais, P.M. (1997). Structural study of the response regulator HupR from rho-dobacter capsulatus. Electron microscopy of two-dimensional crystals on a nickel-chelating lipid. J. Mol. Biol. 274, 687-692. (Pubitemid 28021338)
16. Kubalek, E.W., Le Grice, S.F., and Brown, P.O. (1994). Two-dimensional crystallization of histidine-tagged, HIV-1 reverse transcriptase promoted by a novel nickel-chelating lipid. J. Struct. Biol. 113, 117-123.
17. Bischler, N., Balavoine, F., Milkereit, P., Tschochner, H., Mioskowski, C., and Schultz, P. (1998). Specific interaction and two-dimensional crystallization of histidine tagged yeast RNA polymerase I on nickel-chelating lipids. Biophys. J. 74, 1522-1532. (Pubitemid 28108560)
18. Mosser, G., and Brisson, A. (1991). Structural analysis of two-dimensional arrays of cholera toxin B-subunit. J. Electron Microsc. Tech. 18, 387-394.
19. Crucifix, C., Uhring, M., and Schultz, P. (2004). Immobilization of biotinylated DNA on 2-D streptavidin crystals. J. Struct. Biol. 146, 441-451. (Pubitemid 38507445)
20. Kubalek, E.W., Kornberg, R.D., and Darst, S.A. (1991). Improved transfer of two-dimensional crystals from the air/water interface to specimen support grids for highresolution analysis by electron microscopy. Ultramicroscopy. 35, 295-304.
21. Fukami, A., and Adachi, K. (1965). A new method of preparation of a self-perforated micro plastic grid and its application. J. Electron Microsc. 14, 112-118.
22. Dubochet, J., Adrian, M., Chang, J.J., Homo, J.C., Lepault, J., McDowall, A.W., and Schultz, P. (1988). Cr yo-electron microscopy of vitrified specimens. Q. Rev. Biophys. 21, 129-228.
23. Asturias, F.J., and Kornberg, R.D. (1995). A novel method for transfer of two-dimensional crystals from the air/water interface to specimen grids. EM sample preparation/lipid-layer crystallization. J. Struct. Biol. 114, 60-66.
24. Schmutz, M., and Brisson, A. (1996). Analysis of carbon film planarity by reflected light microscopy. Ultramicroscopy. 63, 263-272. (Pubitemid 26370288)