-
1
-
-
0037050026
-
-
A. C. Gavin, M. Bosche, R. Krause, P. Grandi, M. Marzioch, A. Bauer, J. Schultz, J. M. Rick, A. M. Michon, C. M. Cruciat, M. Remor, C. Hofert, M. Schelder, M. Brajenovic, H. Ruffner, A. Merino, K. Klein, M. Hudak, D. Dickson, T. Rudi, V. Gnau, A. Bauch, S. Bastuck, B. Huhse, C. Leutwein, M. A. Heurtier, R. R. Copley, A. Edelmann, E. Querfurth, V. Rybin, G. Drewes, M. Raida, T. Bouwmeester, P. Bork, B. Seraphin, B. Kuster, G. Neubauer, and G. Superti-Furga, Functional organization of the yeast proteome by systematic analysis of protein complexes, Nature, 415, pp. 141-7, Jan 10 2002.
-
A. C. Gavin, M. Bosche, R. Krause, P. Grandi, M. Marzioch, A. Bauer, J. Schultz, J. M. Rick, A. M. Michon, C. M. Cruciat, M. Remor, C. Hofert, M. Schelder, M. Brajenovic, H. Ruffner, A. Merino, K. Klein, M. Hudak, D. Dickson, T. Rudi, V. Gnau, A. Bauch, S. Bastuck, B. Huhse, C. Leutwein, M. A. Heurtier, R. R. Copley, A. Edelmann, E. Querfurth, V. Rybin, G. Drewes, M. Raida, T. Bouwmeester, P. Bork, B. Seraphin, B. Kuster, G. Neubauer, and G. Superti-Furga, "Functional organization of the yeast proteome by systematic analysis of protein complexes," Nature, vol. 415, pp. 141-7, Jan 10 2002.
-
-
-
-
2
-
-
3242675407
-
Glutathione-S-Transferase-Fusion Based Assays for Studying Protein-Protein Interactions
-
H. Fu, Ed. New Jersey: Humana Press
-
H. G. Vikis and K.-L. Guan, "Glutathione-S-Transferase-Fusion Based Assays for Studying Protein-Protein Interactions," in Protein-Protein Interactions, Methods and Applications, Methods in Molecular Biology. vol. 261, H. Fu, Ed. New Jersey: Humana Press, 2004, pp. 175-186.
-
(2004)
Protein-Protein Interactions, Methods and Applications, Methods in Molecular Biology
, vol.261
, pp. 175-186
-
-
Vikis, H.G.1
Guan, K.-L.2
-
3
-
-
0034841844
-
The tandem affinity purification (TAP) method: A general procedure of protein complex purification
-
Jul
-
O. Puig, F. Caspary, G. Rigaut, B. Rutz, E. Bouveret, E. Bragado-Nilsson, M. Wilm, and B. Seraphin, "The tandem affinity purification (TAP) method: a general procedure of protein complex purification," Methods, vol. 24, pp. 218-29, Jul 2001.
-
(2001)
Methods
, vol.24
, pp. 218-229
-
-
Puig, O.1
Caspary, F.2
Rigaut, G.3
Rutz, B.4
Bouveret, E.5
Bragado-Nilsson, E.6
Wilm, M.7
Seraphin, B.8
-
4
-
-
0035836765
-
-
T. Ito, T. Chiba, R. Ozawa, M. Yoshida, M. Hattori, and Y. Sakaki, A comprehensive two-hybrid analysis to explore the yeast protein interactome Proceedings of the National Academy of Science, 98, pp. 4569-4574, 04/2001 2001.
-
T. Ito, T. Chiba, R. Ozawa, M. Yoshida, M. Hattori, and Y. Sakaki, "A comprehensive two-hybrid analysis to explore the yeast protein interactome " Proceedings of the National Academy of Science, vol. 98, pp. 4569-4574, 04/2001 2001.
-
-
-
-
5
-
-
14844321897
-
Protein microarrays: Applications and future challenges
-
Mar
-
D. Stoll, M. F. Templin, J. Bachmann, and T. O. Joos, "Protein microarrays: applications and future challenges," Curr Opin Drug Discov Devel, vol. 8, pp. 239-52, Mar 2005.
-
(2005)
Curr Opin Drug Discov Devel
, vol.8
, pp. 239-252
-
-
Stoll, D.1
Templin, M.F.2
Bachmann, J.3
Joos, T.O.4
-
6
-
-
0036921994
-
Phage display: Practicalities and prospects
-
Dec
-
W. G. Willats, "Phage display: practicalities and prospects," Plant Mol Biol, vol. 50, pp. 837-54, Dec 2002.
-
(2002)
Plant Mol Biol
, vol.50
, pp. 837-854
-
-
Willats, W.G.1
-
7
-
-
17444374836
-
Specific protein-protein binding in many-component mixtures of proteins
-
Jun
-
R. P. Sear, "Specific protein-protein binding in many-component mixtures of proteins," Phys Biol, vol. 1, pp. 53-60, Jun 2004.
-
(2004)
Phys Biol
, vol.1
, pp. 53-60
-
-
Sear, R.P.1
-
8
-
-
2942552459
-
An automated method for finding molecular complexes in large protein interaction networks
-
Jan 13
-
G. D. Bader and C. W. Hogue, "An automated method for finding molecular complexes in large protein interaction networks," BMC Bioinformatics, vol. 4, p. 2, Jan 13 2003.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 2
-
-
Bader, G.D.1
Hogue, C.W.2
-
9
-
-
0036529479
-
An efficient algorithm for large-scale detection of protein families
-
Apr 1
-
A. J. Enright, S. Van Dongen, and C. A. Ouzounis, "An efficient algorithm for large-scale detection of protein families," Nucleic Acids Res, vol. 30, pp. 1575-84, Apr 1 2002.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 1575-1584
-
-
Enright, A.J.1
Van Dongen, S.2
Ouzounis, C.A.3
-
10
-
-
10244264813
-
Protein complex prediction via cost-based clustering
-
Nov 22
-
A. D. King, N. Przulj, and I. Jurisica, "Protein complex prediction via cost-based clustering," Bioinformatics, vol. 20, pp. 3013-20, Nov 22 2004.
-
(2004)
Bioinformatics
, vol.20
, pp. 3013-3020
-
-
King, A.D.1
Przulj, N.2
Jurisica, I.3
-
11
-
-
33748579201
-
Interaction Graph Mining for Protein Complexes Using Local Clique Merging
-
December
-
X.-L. LI, S.-H. TAN, C.-S. FOO, and S.-K. NG, "Interaction Graph Mining for Protein Complexes Using Local Clique Merging," Genome Informatics, vol. 16, pp. 260-269, December 2005 2005.
-
(2005)
Genome Informatics
, vol.16
, pp. 260-269
-
-
LI, X.-L.1
TAN, S.-H.2
FOO, C.-S.3
NG, S.-K.4
-
12
-
-
0034515528
-
A clustering algorithm based on graph connectivity
-
E. Hartuv and R. Shamir, "A clustering algorithm based on graph connectivity " Information Processing Letters, vol. 76, pp. 175-181, 2000.
-
(2000)
Information Processing Letters
, vol.76
, pp. 175-181
-
-
Hartuv, E.1
Shamir, R.2
-
13
-
-
34547672876
-
Assessing significance of connectivity and conservation in protein interaction networks
-
Jul-Aug
-
M. Koyuturk, W. Szpankowski, and A. Grama, "Assessing significance of connectivity and conservation in protein interaction networks," J Comput Biol, vol. 14, pp. 747-64, Jul-Aug 2007.
-
(2007)
J Comput Biol
, vol.14
, pp. 747-764
-
-
Koyuturk, M.1
Szpankowski, W.2
Grama, A.3
-
14
-
-
10744230485
-
-
A. H. Tong, G. Lesage, G. D. Bader, H. Ding, H. Xu, X. Xin, J. Young, G. F. Berriz, R. L. Brost, M. Chang, Y. Chen, X. Cheng, G. Chua, H. Friesen, D. S. Goldberg, J. Haynes, C. Humphries, G. He, S. Hussein, L. Ke, N. Krogan, Z. Li, J. N. Levinson, H. Lu, P. Menard, C. Munyana, A. B. Parsons, O. Ryan, R. Tonikian, T. Roberts, A. M. Sdicu, J. Shapiro, B. Sheikh, B. Suter, S. L. Wong, L. V. Zhang, H. Zhu, C. G. Burd, S. Munro, C. Sander, J. Rine, J. Greenblatt, M. Peter, A. Bretscher, G. Bell, F. P. Roth, G. W. Brown, B. Andrews, H. Bussey, and C. Boone, Global mapping of the yeast genetic interaction network, Science, 303, pp. 808-13, Feb 6 2004.
-
A. H. Tong, G. Lesage, G. D. Bader, H. Ding, H. Xu, X. Xin, J. Young, G. F. Berriz, R. L. Brost, M. Chang, Y. Chen, X. Cheng, G. Chua, H. Friesen, D. S. Goldberg, J. Haynes, C. Humphries, G. He, S. Hussein, L. Ke, N. Krogan, Z. Li, J. N. Levinson, H. Lu, P. Menard, C. Munyana, A. B. Parsons, O. Ryan, R. Tonikian, T. Roberts, A. M. Sdicu, J. Shapiro, B. Sheikh, B. Suter, S. L. Wong, L. V. Zhang, H. Zhu, C. G. Burd, S. Munro, C. Sander, J. Rine, J. Greenblatt, M. Peter, A. Bretscher, G. Bell, F. P. Roth, G. W. Brown, B. Andrews, H. Bussey, and C. Boone, "Global mapping of the yeast genetic interaction network," Science, vol. 303, pp. 808-13, Feb 6 2004.
-
-
-
-
15
-
-
33645453254
-
-
N. J. Krogan, G. Cagney, H. Yu, G. Zhong, X. Guo, A. Ignatchenko, J. Li, S. Pu, N. Datta, A. P. Tikuisis, T. Punna, J. M. Peregrin-Alvarez, M. Shales, X. Zhang, M. Davey, M. D. Robinson, A. Paccanaro, J. E. Bray, A. Sheung, B. Beattie, D. P. Richards, V. Canadien, A. Lalev, F. Mena, P. Wong, A.Starostine, M. M. Canete, J. Vlasblom, S. Wu, C. Orsi, S. R. Collins, S. Chandran, R. Haw, J. J. Rilstone, K. Gandi, N. J. Thompson, G. Musso, P. St Onge, S. Ghanny, M. H. Lam, G. Butland, A. M. Altaf-Ul, S. Kanaya, A. Shilatifard, E. O'Shea, J. S. Weissman, C. J. Ingles, T. R. Hughes, J. Parkinson, M. Gerstein, S. J. Wodak, A. Emili, and J. F. Greenblatt, Global landscape of protein complexes in the yeast Saccharomyces cerevisiae, Nature, 440, pp. 637-43, Mar 30 2006.
-
N. J. Krogan, G. Cagney, H. Yu, G. Zhong, X. Guo, A. Ignatchenko, J. Li, S. Pu, N. Datta, A. P. Tikuisis, T. Punna, J. M. Peregrin-Alvarez, M. Shales, X. Zhang, M. Davey, M. D. Robinson, A. Paccanaro, J. E. Bray, A. Sheung, B. Beattie, D. P. Richards, V. Canadien, A. Lalev, F. Mena, P. Wong, A.Starostine, M. M. Canete, J. Vlasblom, S. Wu, C. Orsi, S. R. Collins, S. Chandran, R. Haw, J. J. Rilstone, K. Gandi, N. J. Thompson, G. Musso, P. St Onge, S. Ghanny, M. H. Lam, G. Butland, A. M. Altaf-Ul, S. Kanaya, A. Shilatifard, E. O'Shea, J. S. Weissman, C. J. Ingles, T. R. Hughes, J. Parkinson, M. Gerstein, S. J. Wodak, A. Emili, and J. F. Greenblatt, "Global landscape of protein complexes in the yeast Saccharomyces cerevisiae," Nature, vol. 440, pp. 637-43, Mar 30 2006.
-
-
-
-
16
-
-
33644555054
-
-
A. C. Gavin, P. Aloy, P. Grandi, R. Krause, M. Boesche, M. Marzioch, C. Rau, L. J. Jensen, S. Bastuck, B. Dumpelfeld, A. Edelmann, M. A. Heurtier, V. Hoffman, C. Hoefert, K. Klein, M. Hudak, A. M. Michon, M. Schelder, M. Schirle, M. Remor, T. Rudi, S. Hooper, A. Bauer, T. Bouwmeester, G. Casari, G. Drewes, G. Neubauer, J. M. Rick, B. Kuster, P. Bork, R. B. Russell, and G. Superti-Furga, Proteome survey reveals modularity of the yeast cell machinery, Nature, 440, pp. 631-6, Mar 30 2006.
-
A. C. Gavin, P. Aloy, P. Grandi, R. Krause, M. Boesche, M. Marzioch, C. Rau, L. J. Jensen, S. Bastuck, B. Dumpelfeld, A. Edelmann, M. A. Heurtier, V. Hoffman, C. Hoefert, K. Klein, M. Hudak, A. M. Michon, M. Schelder, M. Schirle, M. Remor, T. Rudi, S. Hooper, A. Bauer, T. Bouwmeester, G. Casari, G. Drewes, G. Neubauer, J. M. Rick, B. Kuster, P. Bork, R. B. Russell, and G. Superti-Furga, "Proteome survey reveals modularity of the yeast cell machinery," Nature, vol. 440, pp. 631-6, Mar 30 2006.
-
-
-
-
17
-
-
0033971642
-
DIP: The database of interacting proteins
-
Jan 1
-
I. Xenarios, D. W. Rice, L. Salwinski, M. K. Baron, E. M. Marcotte, and D. Eisenberg, "DIP: the database of interacting proteins," Nucleic Acids Res, vol. 28, pp. 289-91, Jan 1 2000.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 289-291
-
-
Xenarios, I.1
Rice, D.W.2
Salwinski, L.3
Baron, M.K.4
Marcotte, E.M.5
Eisenberg, D.6
-
18
-
-
33644875537
-
MIPS: Analysis and annotation of proteins from whole genomes in 2005
-
Jan 1
-
H. W. Mewes, D. Frishman, K. F. Mayer, M. Munsterkotter, O. Noubibou, P. Pagel, T. Rattei, M. Oesterheld, A. Ruepp, and V. Stumpflen, "MIPS: analysis and annotation of proteins from whole genomes in 2005," Nucleic Acids Res, vol. 34, pp. D169-72, Jan 1 2006.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Mewes, H.W.1
Frishman, D.2
Mayer, K.F.3
Munsterkotter, M.4
Noubibou, O.5
Pagel, P.6
Rattei, T.7
Oesterheld, M.8
Ruepp, A.9
Stumpflen, V.10
-
19
-
-
1842580761
-
Functional and topological characterization of protein interaction networks
-
Apr
-
S. H. Yook, Z. N. Oltvai, and A. L. Barabasi, "Functional and topological characterization of protein interaction networks," Proteomics, vol. 4, pp. 928-42, Apr 2004.
-
(2004)
Proteomics
, vol.4
, pp. 928-942
-
-
Yook, S.H.1
Oltvai, Z.N.2
Barabasi, A.L.3
-
20
-
-
0142059836
-
Protein complexes and functional modules in molecular networks
-
Oct 14
-
V. Spirin and L. A. Mirny, "Protein complexes and functional modules in molecular networks," Proc Natl Acad Sci U S A, vol. 100, pp. 12123-8, Oct 14 2003.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 12123-12128
-
-
Spirin, V.1
Mirny, L.A.2
-
21
-
-
33751255087
-
Evaluation of clustering algorithms for protein-protein interaction networks
-
S. Brohee and J. van Helden, "Evaluation of clustering algorithms for protein-protein interaction networks," BMC Bioinformatics, vol. 7, p. 488, 2006.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 488
-
-
Brohee, S.1
van Helden, J.2
|