Trifluoroethanol reveals helical propensity at analogous positions in cytoplasmic domains of three connexins

Biopolymers

Volumn 92, Issue 3, 2009, Pages 173-182

  Fort, Alfredo G ^a   Spray, David C ^a  

^a ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

Author keywords

Circular dichroism; Gap junctions; Peptides; Secondary structure; Spectroscopy

Indexed keywords

AMINO ACID SEQUENCE; AQUEOUS BUFFER; CIRCULAR DICHROISM; COMPARATIVE STUDIES; CONFORMATIONAL PROPERTIES; CYTOPLASMIC DOMAINS; GAP JUNCTION PROTEINS; GAP JUNCTIONS; HELICAL CONTENT; IN-CHANNEL; PH SENSITIVITY; PROTEIN DOMAINS; PROTEIN-PROTEIN INTERACTIONS; SECONDARY STRUCTURE; SECONDARY STRUCTURES; SYNTHETIC PEPTIDE; TRIFLUOROETHANOL;

AMINES; AMINO ACIDS; BINDING ENERGY; BINDING SITES; DICHROISM; ELECTRIC POTENTIAL; ETHANOL; ORGANIC ACIDS; PEPTIDES;

CIRCULAR DICHROISM SPECTROSCOPY;

BUFFER; CONNEXIN 32; CONNEXIN 36; CONNEXIN 43; GAP JUNCTION PROTEIN; TRIFLUOROETHANOL;

AMINO ACID SEQUENCE; ARTICLE; CIRCULAR DICHROISM; COMPARATIVE STUDY; CYTOPLASM; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; PROTEIN SECONDARY STRUCTURE; CHEMISTRY; CLASSIFICATION; GENETICS; MOLECULAR GENETICS; MUTATION; PROTEIN FOLDING;

AMINO ACID SEQUENCE; CIRCULAR DICHROISM; CONNEXINS; MOLECULAR SEQUENCE DATA; MUTATION; PROTEIN FOLDING; TRIFLUOROETHANOL;

EID: 67549125421     PISSN: 00063525     EISSN: 10970282     Source Type: Journal    
DOI: 10.1002/bip.21166     Document Type: Article

References (56)

1. Sohl, G.; Willecke, K. Cell Commun Adhes 2003, 10, 173-180.
2. Harris, A. L. Q Rev Biophys 2001, 34, 325-472.
3. Duffy, H. S.; Fort, A. G.; Spray, D. C. Adv Cardiol 2006, 42, 1-17.
4. Unger, V. M.; Kumar, N. M.; Gilula, N. B.; Yeager, M. Science 1999, 283, 1176-1180.
5. Oshima, A.; Tani, K.; Hiroaki, Y.; Fujiyoshi, Y.; Sosinsky, G. E. Proc Natl Acad Sci USA 2007, 104, 10034-10039.
6. Foote, C. I.; Zhou, L.; Zhu, X.; Nicholson, B. J. J Cell Biol 1998, 140, 1187-1197.
7. Purnick, P. E.; Benjamin, D. C.; Verselis, V. K.; Bargiello, T. A.; Dowd, T. L. Arch Biochem Biophys 2000, 381, 181-190.
8. Duffy, H. S.; Sorgen, P. L.; Girvin, M. E.; O'Donnell, P.; Coombs, W.; Taffet, S. M.; Delmar, M.; Spray, D. C. J Biol Chem 2002, 277, 36706-36714.
9. Sorgen, P. L.; Duffy, H. S.; Cahill, S. M.; Coombs, W.; Spray, D. C.; Delmar, M.; Girvin, M. E. J Biomol NMR 2002, 23, 245-246.
10. Sorgen, P. L.; Duffy, H. S.; Sahoo, P.; Coombs, W.; Delmar, M.; Spray, D. C. J Biol Chem 2004, 279, 54695-54701.
11. Sorgen, P. L.; Duffy, H. S.; Spray, D. C.; Delmar, M. Biophys J 2004, 87, 574-581.
12. Ramirez-Alvarado, M.; Blanco, F. J.; Niemann, H.; Serrano, L. J Mol Biol 1997, 273, 898-912.
13. Reiersen, H; Rees, A. R. Protein Eng 2000, 13, 739-743.
14. Martenson, R. E.; Park, J. Y.; Stone, A. L. Biochemistry 1985, 24, 7689-7695.
15. Li, W.; Hertzberg, E. L.; Spray, D. C. J Biol Chem 2005, 280, 7941-7948.
16. Iacobas, D. A.; Iacobas, S.; Li, W. E.; Zoidl, G.; Dermietzel, R.; Spray, D. C. Physiol Genomics 2005, 20, 211-223.
17. Iacobas, D. A.; Iacobas, S.; Urban-Maldonado, M.; Spray, D. C. Biochim Biophys Acta 2005, 1711, 183-196.
18. Spray, D. C.; Iacobas, D. A. J Membr Biol 2007, 218, 39-47.
19. Verselis, V. K.; Ginter, C. S.; Bargiello, T. A. Nature 1994, 368, 348-351
20. Oh, S.; Abrams, C. K.; Verselis, V. K.; Bargiello, T. A. J Gen Physiol 2000, 116, 13-31.
21. Srinivas, M.; Rozental, R.; Kojima, T.; Dermietzel, R.; Mehler, M.; Condorelli, D. F.; Kessler, J. A.; Spray, D. C. J Neurosci 1999, 19, 9848-9855.
22. Hirst-Jensen, B. J.; Sahoo, P.; Kieken, F.; Delmar, M.; Sorgen, P. L. J Biol Chem 2007, 282, 5801-5813.
23. Giepmans, B. N.; Verlaan, I.; Moolenaar, W. H. Cell Commun Adhes 2001, 8, 219-223.
24. Goodman, M.; Listowsky, I. J Am Chem Soc 1962, 84, 3770-3771.
25. Alexandrescu, A. T.; Ng, Y. L.; Dobson, C. M. J Mol Biol 1994, 235, 587-599.
26. Olofsson, S.; Baltzer, L. Fold Des 1996, 1, 347-356.
27. Lehrman, S.; Tuls, J.; Lund, M. Biochemistry 1990, 29, 5590-5596.
28. Luidens, M.; Figge, J.; Breese, K.; Vajda, S. Biopolymers 1996, 39, 367-376.
29. Sönnichsen, F.; Van Eyk, J.; Hodges, R.; Sykes, B. Biochemistry 1992, 31, 8790-8798.
30. Howard, M.; Smales, C. J Biol Chem 2005, 280, 22582-22589.
31. Kemmink, J.; Creighton, T. Biochemistry 1995, 34, 12630-12635.
32. Yang, J.; Buck, M.; Pitkeathly, M.; Kotik, M.; Haynie, D.; Dobson, C.; Radford, S. J Mol Biol 1995, 252, 483-491.
33. Schönbrunner, N.; Wey, J.; Engels, J.; Georg, H.; Kiefhaber, T. J Mol Biol 1996, 260, 432-445.
34. Fregeau Gallagher, N.; Sailer, M.; Niemczura, W.; Nakashima, T.; Stiles, M.; Vederas, J. Biochemistry 1997, 36, 15062-15072.
35. Najbar, L.; Craik, D.; Wade, J.; Salvatore, D.; McLeish, M. Biochemistry 1997, 36, 11525-11533.
36. Kumar, S.; Modig, K.; Halle, B. Biochemistry 2003, 42, 13708-13716.
37. Morley, G. E.; Taffet, S. M.; Delmar, M. Biophys J 1996, 70, 1294-1302.
38. Bergoffen, J.; Scherer, S. S.; Wang, S.; Scott, M. O.; Bone, L. J.; Paul, D. L.; Chen, K.; Lensch, M. W.; Chance, P. F.; Fischbeck, K. H. Science 1993, 262, 2039-2042.
39. Paznekas, W. A.; Boyadjiev, S. A.; Shapiro, R. E.; Daniels, O.; Wollnik, B.; Keegan, C. E.; Innis, J. W.; Dinulos, M. B.; Christian, C.; Hannibal, M. C. Jabs, E. W. Am J Hum Genet 2003, 72(2), 408-418.
40. Martin, P. E.; Mambetisaeva, E. T.; Archer, D. A.; George, C. H.; Evans, W. H. J Neurochem 2000, 74, 711-720.
41. Abrams, C. K.; Freidin, M. M.; Verselis, V. K.; Bennett, M. V.; Bargiello, T. A. Brain Res 2001, 900, 9-25.
42. Wang, H. L.; Chang, W. T.; Yeh, T. H.; Wu, T.; Chen, M. S.; Wu, C. Y. Neurobiol Dis 2004, 15, 361-370.
43. Yum, S. W.; Kleopa, K. A.; Shumas, S.; Scherer, S. S. Neurobiol Dis 2002, 11, 43-52.
44. Shibayama, J.; Paznekas, W.; Seki, A.; Taffet, S.; Jabs, E. W.; Delmar, M.; Musa, H. Circ Res 2005, 96, e83-e91.
45. Lai, A.; Le, D. N.; Paznekas, W. A.; Gifford, W. D.; Jabs, E. W.; Charles, A. C. J Cell Sci 2006, 119 (Part 3), 532-541.
46. Dobrowolski, R.; Sommershof, A.; Willecke, K. J Membr Biol 2007, 219, 9-17.
47. Krogh, A.; Larsson, B.; von Heijne, G.; Sonnhammer, E. L. J Mol Biol 2001, 305, 567-580.
48. Duffy, H. S.; Sorgen, P. L.; Girvin, M. E.; O'Donnell, P.; Coombs, W.; Taffet, S. M.; Delmar, M.; Spray, D. C. J Biol Chem 2002, 277, 36706-36714.
49. Sreerama, N.; Woody, R. W. Anal Biochem 2000, 287, 252-260.
50. Sreerama, N.; Venyaminov, S. Y.; Woody, R. W. Anal Biochem 2000, 287, 243-251.
51. Viguera, A. R.; Jimenez, M. A.; Rico, M.; Serrano, L. J Mol Biol 1996, 255, 507-521.
52. Chen, Y. H.; Yang, J. T.; Chau, K. H. Biochemistry 1974, 13, 3350-3359.
53. Thompson, J. D.; Higgins, D. G.; Gibson, T. J. Nucleic Acids Res 1994, 22, 4673-4680.
54. Rice, P.; Longden, I.; Bleasby, A. Trends Genet 2000, 16, 276-277.
55. Cole, C.; Barber, J. D.; Barton, G. J. Nucleic Acids Res 2008, 36(Web Server issue), W197-201.
56. Bau, D.; Martin, A. J.; Mooney, C.; Vullo, A.; Walsh, I.; Pollastri, G. BMC Bioinformatics 2006, 7, 402.