메뉴 건너뛰기




Volumn 40, Issue 9, 2009, Pages 1064-1072

Microbial community diversity associated with the intestinal mucosa of farmed rainbow trout (Oncoryhnchus mykiss Walbaum)

Author keywords

Autochthonous; DGGE; Gut microbiota; Rainbow trout; Scanning electron microscopy

Indexed keywords

BACTERIUM; ELECTROKINESIS; MICROBIAL COMMUNITY; RNA; SALMONID; SPECIES DIVERSITY; STOMACH CONTENT;

EID: 67449163796     PISSN: 1355557X     EISSN: 13652109     Source Type: Journal    
DOI: 10.1111/j.1365-2109.2009.02200.x     Document Type: Article
Times cited : (95)

References (33)
  • 1
    • 0024198941 scopus 로고
    • The effect of antimicrobial compounds on the gastrointestinal microflora of rainbow trout, Salmo gairdneri Richardson
    • Austin B. Al-Zahrani A.M.J. (1988) The effect of antimicrobial compounds on the gastro - intestinal microflora of rainbow trout, Salmo gairdneri Richardson. Journal of Fish Biology 33, 1 14. (Pubitemid 19323750)
    • (1988) Journal of Fish Biology , vol.33 , Issue.1 , pp. 1-14
    • Austin, B.1    Al-Zahrani, A.M.J.2
  • 2
    • 84907184176 scopus 로고    scopus 로고
    • Optimization of a reliable, fast, cheap and sensitive silver staining method to detect ssr markers in polyacrylamide gels
    • Benbouza H., Jacquemin J.L., Baudoin J.P. Mergeai G. (2006) Optimization of a reliable, fast, cheap and sensitive silver staining method to detect ssr markers in polyacrylamide gels. Biotechnologie, Agronomie, Societe et Environnement 10, 77 81.
    • (2006) Biotechnologie, Agronomie, Societe et Environnement , vol.10 , pp. 77-81
    • Benbouza, H.1    Jacquemin, J.L.2    Baudoin, J.P.3    Mergeai, G.4
  • 3
    • 33645759495 scopus 로고    scopus 로고
    • Pathogenesis and the gastrointestinal tract of growing fish
    • In. ed. by. W. Holzapfel. P. Naughton. pp. Elsevier. Edinburgh, UK.
    • Birkbeck T.H. Ringø E. (2005) Pathogenesis and the gastrointestinal tract of growing fish. In : Microbial Ecology in Growing Animals (ed. by W. Holzapfel P. Naughton pp. 208 234. Elsevier, Edinburgh, UK.
    • (2005) Microbial Ecology in Growing Animals , pp. 208-234
    • Birkbeck, T.H.1    Ringø, E.2
  • 4
    • 0025350606 scopus 로고
    • Bacterial flora of fishes: A review
    • DOI 10.1007/BF02015051
    • Cahill M.M. (1990) Bacterial flora of fishes: a review. Microbial Ecology 19, 21 41. (Pubitemid 20237059)
    • (1990) Microbial Ecology , vol.19 , Issue.1 , pp. 21-41
    • Cahill, M.M.1
  • 6
    • 0347760409 scopus 로고    scopus 로고
    • Bacterial Diversity in Agricultural Soils during Litter Decomposition
    • DOI 10.1128/AEM.70.1.468-474.2004
    • Dilly O., Bloem J., Vos A. Munch J.C. (2004) Bacterial diversity in agricultural soils during litter decomposition. Applied and Environmental Microbiology 70, 468 474. (Pubitemid 38090238)
    • (2004) Applied and Environmental Microbiology , vol.70 , Issue.1 , pp. 468-474
    • Dilly, O.1    Bloem, J.2    Vos, A.3    Munch, J.C.4
  • 7
    • 33751058986 scopus 로고    scopus 로고
    • Effects of soybean meal based diet on growth performance, gut histopathology and intestinal microbiota of juvenile rainbow trout (Oncorhynchus mykiss)
    • DOI 10.1016/j.aquaculture.2006.07.012, PII S0044848606005011
    • Heikkinen J., Vielma J., Kemiläinen O., Tiirola M., Eskelinen P., Kiuru T., Navia-Paldanius D. von Wright A. (2006) Effects of soybean meal based diet on growth performance, gut histopathology and intestinal microbiota of juvenile rainbow trout (Oncorhynchus mykiss). Aquaculture 261, 259 268. (Pubitemid 44755160)
    • (2006) Aquaculture , vol.261 , Issue.1 , pp. 259-268
    • Heikkinen, J.1    Vielma, J.2    Kemilainen, O.3    Tiirola, M.4    Eskelinen, P.5    Kiuru, T.6    Navia-Paldanius, D.7    Von Wright, A.8
  • 8
    • 0036690693 scopus 로고    scopus 로고
    • Phylogenetic analysis of intestinal microflora indicates a novel Mycoplasma phylotype in farmed and wild salmon
    • DOI 10.1007/s00248-002-1011-6
    • Holben W.E., Williams P., Saarinen M., Särkilahti L.K. Apajalahti J.H.A. (2002) Phylogenetic analysis of intestinal microflora indicates a novel Mycoplasma phylotype in farmed and wild salmon. Microbial Ecology 44, 175 185. (Pubitemid 36941385)
    • (2002) Microbial Ecology , vol.44 , Issue.2 , pp. 175-185
    • Holben, W.E.1    Williams, P.2    Saarinen, M.3    Sarkilahti, L.K.4    Apajalahti, J.H.A.5
  • 10
    • 0842308827 scopus 로고    scopus 로고
    • Phylogenetic analysis and in situ identification of the intestinal microbial community of rainbow trout (Oncorhynchus mykiss, Walbaum)
    • DOI 10.1046/j.1365-2672.2003.02109.x
    • Huber I., Spanggaard B., Appel K.F., Rossen L., Nielsen T. Gram L. (2004) Phylogenetic analysis and in situ identification of the intestinal microbial community of rainbow trout (Oncorhynchus mykiss, Walbaum). Journal of Applied Microbiology 96, 117 132. (Pubitemid 38177911)
    • (2004) Journal of Applied Microbiology , vol.96 , Issue.1 , pp. 117-132
    • Huber, I.1    Spanggaard, B.2    Appel, K.F.3    Rossen, L.4    Nielsen, T.5    Gram, L.6
  • 11
    • 34250639282 scopus 로고    scopus 로고
    • Microbial diversity of intestinal contents and mucus in rainbow trout (Oncorhynchus mykiss)
    • DOI 10.1111/j.1365-2672.2006.03185.x
    • Kim D.-H., Brunt J. Austin B. (2007) Microbial diversity of intestinal contents and mucus in rainbow trout (Oncorhynchus mykiss). Journal of Applied Microbiology 102, 1654 1664. (Pubitemid 46934584)
    • (2007) Journal of Applied Microbiology , vol.102 , Issue.6 , pp. 1654-1664
    • Kim, D.-H.1    Brunt, J.2    Austin, B.3
  • 12
    • 0242280227 scopus 로고
    • Implantation de la flore bacteréenne dans le tube digestif de la truite arc-en-ciel. Etude au microscope électronique à balayage
    • Lesel R. Pointel J.-G. (1979) Implantation de la flore bacteréenne dans le tube digestif de la truite arc-en-ciel. Etude au microscope électronique à balayage. Annales de Zoologie Ecologie Animale 11, 327 335.
    • (1979) Annales de Zoologie Ecologie Animale , vol.11 , pp. 327-335
    • Lesel, R.1    Pointel, J.-G.2
  • 14
    • 0001217138 scopus 로고
    • Interactions of microorganisms and aquatic animals, particularly the nutritional role of the gut flora
    • In. ed. by. R. Lesel. pp. Elsevier. Amsterdam, the Netherlands.
    • Moriarty D.J.W. (1990) Interactions of microorganisms and aquatic animals, particularly the nutritional role of the gut flora. In : Microbiology in Poecilotherms (ed. by R. Lesel pp. 217 222. Elsevier, Amsterdam, the Netherlands.
    • (1990) Microbiology in Poecilotherms , pp. 217-222
    • Moriarty, D.J.W.1
  • 15
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer G., de Waal E.C. Uitterlinden A.G. (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Applied and Environmental Microbiology 59, 695 700. (Pubitemid 23072343)
    • (1993) Applied and Environmental Microbiology , vol.59 , Issue.3 , pp. 695-700
    • Muyzer, G.1    De Waal, E.C.2    Uitterlinden, A.G.3
  • 16
    • 33750078999 scopus 로고    scopus 로고
    • Effects of administration of probiotic strains on GALT of larval gilthead seabream: Immunohistochemical and ultrastructural studies
    • DOI 10.1016/j.fsi.2006.03.009, PII S105046480600057X
    • Picchietti S., Mazzini M., Taddei A.R., Renna R., Fausto A.M., Mulero V., Carnevali O., Cresci A. Abelli L. (2007) Effects of administration of probiotic strains on GALT of larval gilthead seabream: immunohistochemical and ultrastructural studies. Fish and Shellfish Immunology 22, 57 67. (Pubitemid 44584739)
    • (2007) Fish and Shellfish Immunology , vol.22 , Issue.1 , pp. 57-67
    • Picchietti, S.1    Mazzini, M.2    Taddei, A.R.3    Renna, R.4    Fausto, A.M.5    Mulero, V.6    Carnevali, O.7    Cresci, A.8    Abelli, L.9
  • 17
    • 33750603424 scopus 로고    scopus 로고
    • Comparison of conventional and molecular techniques to investigate the intestinal microflora of rainbow trout (Oncorhynchus mykiss)
    • DOI 10.1016/j.aquaculture.2006.06.037, PII S0044848606004790
    • Pond M.J., Stone D.M. Alderman D.J. (2006) Comparison of conventional and molecular techniques to investigate the intestinal microflora of rainbow trout (Oncorhynchus mykiss). Aquaculture 261, 194 203. (Pubitemid 44679769)
    • (2006) Aquaculture , vol.261 , Issue.1 , pp. 194-203
    • Pond, M.J.1    Stone, D.M.2    Alderman, D.J.3
  • 18
    • 0242276223 scopus 로고    scopus 로고
    • Enzyme production by obligate intestinal anaerobic bacteria isolated from oscars (Astronotus ocellatus), angelfish (Pterophyllum scalare) and southern flounder (Paralichthys lethostigma)
    • DOI 10.1016/S0044-8486(03)00520-9
    • Ramirez R.F. Dixon B.A. (2003) Enzyme production by obligate intestinal anaerobic bacteria isolated from oscars (Astronotus ocellatus), angelfish (Pterophyllum scalare) and southern flounder (Paralichthys lethostigma). Aquaculture 227, 417 426. (Pubitemid 37353722)
    • (2003) Aquaculture , vol.227 , Issue.1-4 , pp. 417-426
    • Ramirez, R.F.1    Dixon, B.A.2
  • 19
    • 0023582599 scopus 로고
    • Fermentative microbial digestion in herbivorous fishes
    • Rimmer D.W. Wiebe W.J. (1987) Fermentative microbial digestion in herbivorous fishes. Journal of Fish Biology 31, 229 236. (Pubitemid 19319360)
    • (1987) Journal of Fish Biology , vol.31 , Issue.2 , pp. 229-236
    • Rimmer, D.W.1    Wiebe, W.J.2
  • 20
    • 0032579167 scopus 로고    scopus 로고
    • Lactic acid bacteria in fish: A review
    • DOI 10.1016/S0044-8486(97)00299-8, PII S0044848697002998
    • Ringø E. Gatesoupe F.-J. (1998) Lactic acid bacteria in fish: a review. Aquaculture 160, 177 203. (Pubitemid 28314114)
    • (1998) Aquaculture , vol.160 , Issue.3-4 , pp. 177-203
    • Ringo, E.1    Gatesoupe, F.-J.2
  • 22
    • 0242371016 scopus 로고    scopus 로고
    • Electron microscopy of the intestinal microflora of fish
    • DOI 10.1016/j.aquaculture.2003.05.001
    • Ringø E., Olsen R.E., Mayhew T.M. Myklebust R. (2003) Electron microscopy of the intestinal microflora of fish. Aquaculture 227, 395 415. (Pubitemid 37353721)
    • (2003) Aquaculture , vol.227 , Issue.1-4 , pp. 395-415
    • Ringo, E.1    Olsen, R.E.2    Mayhew, T.M.3    Myklebust, R.4
  • 23
    • 33751257151 scopus 로고    scopus 로고
    • The effect of dietary krill supplementation on epithelium-associated bacteria in the hindgut of Atlantic salmon (Salmo salar L.): A microbial and electron microscopical study
    • DOI 10.1111/j.1365-2109.2006.01611.x
    • Ringø E., Sperstad S., Myklebust R., Mayhew T.M., Mjelde A., Melle W. Olsen R.E. (2006) The effect of dietary krill supplementation on epithelium-associated bacteria in the hindgut of Atlantic salmon (Salmo salar L.): a microbial and electron microscopial study. Aquaculture Research 37, 1644 1653. (Pubitemid 44789711)
    • (2006) Aquaculture Research , vol.37 , Issue.16 , pp. 1644-1653
    • Ringo, E.1    Sperstad, S.2    Myklebust, R.3    Mayhew, T.M.4    Mjelde, A.5    Melle, W.6    Olsen, R.E.7
  • 24
    • 33745096877 scopus 로고    scopus 로고
    • The effect of dietary inulin on aerobic bacteria associated with hindgut of Arctic charr (Salvelinus alpinus L.)
    • DOI 10.1111/j.1365-2109.2006.01509.x
    • Ringø E., Sperstad S., Myklebust R., Mayhew T.M. Olsen R.E. (2006) The effect dietary inulin on aerobic bacteria associated with the hindgut of Arctic charr (Salvelinus alpines L.). Aquaculture Research 37, 891 897. (Pubitemid 43881770)
    • (2006) Aquaculture Research , vol.37 , Issue.9 , pp. 891-897
    • Ringo, E.1    Sperstad, S.2    Myklebust, R.3    Mayhew, T.M.4    Olsen, R.E.5
  • 25
    • 33750526279 scopus 로고    scopus 로고
    • Characterisation of the microbiota associated with intestine of Atlantic cod (Gadus morhua L.). The effect of fish meal, standard soybean meal and a bioprocessed soybean meal
    • DOI 10.1016/j.aquaculture.2006.06.030, PII S0044848606004613
    • Ringø E., Sperstad S., Myklebust R., Refstie S. Krogdahl A. (2006) Characterisation of the microbiota associated with intestine of Atlantic cod (Gadus morhua L.). The effect of fish meal, standard soybean meal and a bioprocessed soybean meal. Aquaculture 261, 829 841. (Pubitemid 44666949)
    • (2006) Aquaculture , vol.261 , Issue.3 , pp. 829-841
    • Ringo, E.1    Sperstad, S.2    Myklebust, R.3    Refstie, S.4    Krogdahl, A.5
  • 26
    • 34347345978 scopus 로고    scopus 로고
    • Bacterial translocation and pathogenesis in the digestive tract of larvae and fry
    • DOI 10.1016/j.aquaculture.2007.04.047, PII S0044848607003730
    • Ringø E., Myklebust R., Mayhew T.M. Olsen R.E. (2007) Bacterial translocation and pathogenesis in the digestive tract of larvae and fry. Aquaculture 268, 251 264. (Pubitemid 47017392)
    • (2007) Aquaculture , vol.268 , Issue.SPEC. ISS. , pp. 251-264
    • Ringo, E.1    Myklebust, R.2    Mayhew, T.M.3    Olsen, R.E.4
  • 27
    • 0032953832 scopus 로고    scopus 로고
    • Intestinal microflora of fish larvae and fry
    • DOI 10.1046/j.1365-2109.1999.00302.x
    • Ringø R. Birkbeck T.H. (1999) Intestinal microflora of fish larvae and fry. Aquaculture Research 30, 73 93. (Pubitemid 29178090)
    • (1999) Aquaculture Research , vol.30 , Issue.2 , pp. 73-93
    • Ringo, E.1    Birkbeck, T.H.2
  • 28
    • 38849144500 scopus 로고    scopus 로고
    • In vitro studies of Lactobacillus delbrueckii subsp. lactis in Atlantic salmon (Salmo salar L.) foregut: Tissue responses and evidence of protection against Aeromonas salmonicida subsp. salmonicida epithelial damage
    • DOI 10.1016/j.vetmic.2007.10.011, PII S037811350700483X
    • Salinas I., Myklebust R., Esteban M.A., Olsen R.E., Meseguer J. Ringø E. (2008) In vitro studies of Lactobacillus delbrueckii subsp. lactis in Atlantic salmon (Salmo salar L.) foregut: tissue responses and evidence of protection against Aeromonas salmonicida subsp. salmonicida epithelial damage. Veterinary Microbiology 128, 167 177. (Pubitemid 351192255)
    • (2008) Veterinary Microbiology , vol.128 , Issue.1-2 , pp. 167-177
    • Salinas, I.1    Myklebust, R.2    Esteban, M.A.3    Olsen, R.E.4    Meseguer, J.5    Ringo, E.6
  • 29
    • 0034141962 scopus 로고    scopus 로고
    • The microflora of rainbow trout intestine: A comparison of traditional and molecular identification
    • DOI 10.1016/S0044-8486(99)00250-1, PII S0044848699002501
    • Spanggaard B., Huber I., Nielsen J., Nielsen T., Appel K.F. Gram L. (2000) The microflora of rainbow trout intestine: a comparison of traditional and molecular identification. Aquaculture 182, 1 15. (Pubitemid 30061476)
    • (2000) Aquaculture , vol.182 , Issue.1-2 , pp. 1-15
    • Spanggaard, B.1    Huber, I.2    Nielsen, J.3    Nielsen, T.4    Appel, K.F.5    Gram, L.6
  • 31
    • 0031020278 scopus 로고    scopus 로고
    • Production of amylase by the intestinal microflora in cultured freshwater fish
    • Sugita H., Kawasaki J. Deguchi Y. (1997) Production of amylase by the intestinal microflora in cultured freshwater fish. Letters in Applied Microbiology 24, 105 108. (Pubitemid 27099550)
    • (1997) Letters in Applied Microbiology , vol.24 , Issue.2 , pp. 105-108
    • Sugita, H.1    Kawasaki, J.2    Deguchi, Y.3
  • 32
    • 0032526497 scopus 로고    scopus 로고
    • Production of the antibacterial substance by Bacillus sp. strain NM 12, an intestinal bacterium of Japanese coastal fish
    • DOI 10.1016/S0044-8486(98)00267-1, PII S0044848698002671
    • Sugita H., Hirose Y., Matsuo N. Deguchi Y. (1998) Production of the antibacterial substance by Bacillus sp. strain NM 12, an intestinal bacterium of Japanese coastal fish. Aquaculture 165, 269 280. (Pubitemid 28395343)
    • (1998) Aquaculture , vol.165 , Issue.3-4 , pp. 269-280
    • Sugita, H.1    Hirose, Y.2    Matsuo, N.3    Deguchi, Y.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.