메뉴 건너뛰기




Volumn 50, Issue 3, 2009, Pages 224-232

Structure and organization of the rDNA intergenic spacer region in Pythium ultimum

Author keywords

Heterogeneity; Intergenic spacer (IGS); Pythium ultimum; Tandem repeat

Indexed keywords

PYTHIUM; PYTHIUM ULTIMUM;

EID: 67449135279     PISSN: 13403540     EISSN: 16182545     Source Type: Journal    
DOI: 10.1007/s10267-008-0473-x     Document Type: Article
Times cited : (2)

References (33)
  • 1
    • 0005118662 scopus 로고
    • Comparative protein studies of several Pythium species using isoelectric focusing
    • J.E. Adaskaveg M.E. Stanghellini R.L. Gilvertson N.B. Egen 1988 Comparative protein studies of several Pythium species using isoelectric focusing Mycologia 80 665 672
    • (1988) Mycologia , vol.80 , pp. 665-672
    • Adaskaveg, J.E.1    Stanghellini, M.E.2    Gilvertson, R.L.3    Egen, N.B.4
  • 3
    • 0030019756 scopus 로고    scopus 로고
    • Diverged 5s rRNA sequences adjacent to 5s rRNA genes in the rDNA of Pythium pachycaule
    • DOI 10.1007/s002940050048
    • A. Belkhiri G.R. Klassen 1996 Diverged 5S rRNA sequences adjacent to 5S rRNA genes in the rDNA of Pythium pachycaule Curr Genet 29 287 292 (Pubitemid 26055500)
    • (1996) Current Genetics , vol.29 , Issue.3 , pp. 287-292
    • Belkhiri, A.1    Klassen, G.R.2
  • 4
    • 0026496490 scopus 로고
    • The 5S ribosomal RNA gene in Pythium species: Two different genomic locations
    • A. Belkhiri J. Buchko G.R. Klassen 1992 The 5S ribosomal RNA gene in Pythium species: two different genomic locations Mol Biol Evol 9 1089 1102
    • (1992) Mol Biol Evol , vol.9 , pp. 1089-1102
    • Belkhiri, A.1    Buchko, J.2    Klassen, G.R.3
  • 5
    • 0025096432 scopus 로고
    • Detection of length heterogeneity in the ribosomal DNA of Pythium ultimum by PCR amplification of the intergenic region
    • J. Buchko G.R. Klassen 1990 Detection of length heterogeneity in the ribosomal DNA of Pythium ultimum by PCR amplification of the intergenic region Curr Genet 18 203 205 (Pubitemid 20333860)
    • (1990) Current Genetics , vol.18 , Issue.3 , pp. 203-205
    • Buchko, J.1    Klassen, G.R.2
  • 6
    • 0001675360 scopus 로고
    • Molecular and morphological comparison of Pythium arrhenomanes and P. graminicola
    • W. Chen J.W. Hoy 1993 Molecular and morphological comparison of Pythium arrhenomanes and P. graminicola Mycol Res 97 1371 1378
    • (1993) Mycol Res , vol.97 , pp. 1371-1378
    • Chen, W.1    Hoy, J.W.2
  • 7
    • 0000320064 scopus 로고
    • Taxonomic and phylogenetic analysis of ten Pythium species using isozyme polymorphisms
    • W. Chen R.W. Schneider J.W. Hoy 1992 Taxonomic and phylogenetic analysis of ten Pythium species using isozyme polymorphisms Phytopathology 82 1234 1244
    • (1992) Phytopathology , vol.82 , pp. 1234-1244
    • Chen, W.1    Schneider, R.W.2    Hoy, J.W.3
  • 8
    • 0027296860 scopus 로고
    • Outcrossing in the homothallic oomycete, Pythium ultimum detected with molecular markers
    • D.M. Francis D.A. St. Clair 1993 Outcrossing in the homothallic oomycetes, Pythium ultimum, detected with molecular markers Curr Genet 24 100 106 (Pubitemid 23240898)
    • (1993) Current Genetics , vol.24 , Issue.1-2 , pp. 100-106
    • Francis, D.M.1    St Clair, D.A.2
  • 9
    • 0028534801 scopus 로고
    • Genetic variation in homothallic and hyphal swelling isolates of Pythium ultimum var. ultimum and P. ultimum var. sporangiiferum
    • D.M. Francis M.F. Gehlen D.A. St. Clair 1994 Genetic variation in homothallic and hyphal swelling isolates of Pythium ultimum var. ultimum and P. ultimum var. sporangiiferum Mol Plant Microbe Interact 7 766 775
    • (1994) Mol Plant Microbe Interact , vol.7 , pp. 766-775
    • Francis, D.M.1    Gehlen, M.F.2    St. Clair, D.A.3
  • 10
    • 0347479370 scopus 로고    scopus 로고
    • Genetic Heterogeneity in the rRNA Gene Locus of Trichophyton tonsurans
    • DOI 10.1128/JCM.41.12.5478-5487.2003
    • A. Gaedigk R. Gaedigk S.M. Abdel-Rahman 2003 Genetic heterogeneity in the rRNA gene locus of Trichophyton tonsurans J Clin Microbiol 41 5478 5487 (Pubitemid 37543233)
    • (2003) Journal of Clinical Microbiology , vol.41 , Issue.12 , pp. 5478-5487
    • Gaedigk, A.1    Gaedigk, R.2    Abdel-Rahman, S.M.3
  • 11
    • 0034460697 scopus 로고    scopus 로고
    • Strain identification of Trichophyton rubrum by specific amplification of subrepeat elements in the ribosomal DNA nontranscribed spacer
    • C.J. Jackson R.C. Barton S.L. Kelly E.G.V. Evans 2000 Strain identification of Trichophyton rubrum by specific amplification of subrepeat elements in the ribosomal DNA nontranscribed spacer J Clin Microbiol 38 4527 4534 (Pubitemid 32244544)
    • (2000) Journal of Clinical Microbiology , vol.38 , Issue.12 , pp. 4527-4534
    • Jackson, C.J.1    Barton, R.C.2    Kelly, S.L.3    Evans, E.G.V.4
  • 12
    • 0031908183 scopus 로고    scopus 로고
    • Characterization of the hyphal swelling group of Pythium: DNA polymorphisms and cultural and morphological characteristics
    • K. Kageyama H. Uchino M. Hyakumachi 1998 Characterization of the hyphal swelling group of Pythium: DNA polymorphisms and cultural and morphological characteristics Plant Dis 82 218 222
    • (1998) Plant Dis , vol.82 , pp. 218-222
    • Kageyama, K.1    Uchino, H.2    Hyakumachi, M.3
  • 13
    • 21244487435 scopus 로고    scopus 로고
    • Phylogenetic and morphological analyses of Pythium graminicola and related species
    • DOI 10.1007/s10327-005-0184-5
    • K. Kageyama A. Nakashima Y. Kajihara H. Suga E.B. Nelson 2005 Phylogenetic and morphological analyses of Pythium graminicola and related species J Gen Plant Pathol 71 174 182 (Pubitemid 40886309)
    • (2005) Journal of General Plant Pathology , vol.71 , Issue.3 , pp. 174-182
    • Kageyama, K.1    Nakashima, A.2    Kajihara, Y.3    Suga, H.4    Nelson, E.B.5
  • 14
    • 34249650217 scopus 로고    scopus 로고
    • Intra-isolate heterogeneity of the ITS region of rDNA in Pythium helicoides
    • DOI 10.1016/j.mycres.2007.01.019, PII S0953756207000561
    • K. Kageyama M. Senda T. Asano H. Suga K. Ishiguro 2007 Intraisolate heterogeneity of the ITS region of rDNA in Pythium helicoides Mycol Res 111 416 423 (Pubitemid 46830888)
    • (2007) Mycological Research , vol.111 , Issue.4 , pp. 416-423
    • Kageyama, K.1    Senda, M.2    Asano, T.3    Suga, H.4    Ishiguro, K.5
  • 16
    • 0025355325 scopus 로고
    • Subrepeat structure of the intergenic region in the ribosomal DNA of the oomycetous fungus Pythium ultimum
    • G.R. Klassen J. Buchko 1990 Subrepeat structure of the intergenic region in the ribosomal DNA of the oomycetes fungus Pythium ultimum Curr Genet 17 125 127 (Pubitemid 20101187)
    • (1990) Current Genetics , vol.17 , Issue.2 , pp. 125-127
    • Klassen, G.R.1    Buchko, J.2
  • 17
    • 13444305471 scopus 로고    scopus 로고
    • Molecular phylogeny and taxonomy of the genus Pythium
    • DOI 10.1017/S0953756204001431
    • C.A. Lévesque A.W.A.M. de Cock 2004 Molecular phylogeny and taxonomy of the genus Pythium Mycol Res 108 1363 1383 (Pubitemid 40198908)
    • (2004) Mycological Research , vol.108 , Issue.12 , pp. 1363-1383
    • Levesque, C.A.1    De Cock, A.W.A.M.2
  • 18
    • 0035983969 scopus 로고    scopus 로고
    • Structure, molecular evolution, and phylogenetic utility of the 5′ region of the external transcribed spacer of 18S-26S rDNA in Lessingia (Compositae, Astereae)
    • DOI 10.1016/S1055-7903(02)00004-0, PII S1055790302000040
    • S. Markos B.G. Baldwin 2002 Structure, molecular evolution, and phylogenetic utility of the 5 region of the external transcribed spacer of 18S-26S rDNA in Lessingia (Compositae, Astereae) Mol Phylogenet Evol 23 214 228 (Pubitemid 34703377)
    • (2002) Molecular Phylogenetics and Evolution , vol.23 , Issue.2 , pp. 214-228
    • Markos, S.1    Baldwin, B.G.2
  • 19
    • 0025283923 scopus 로고
    • Taxonomic classification of asexual isolates of Pythium ultimum based on cultural characteristics and mitochondrial DNA restriction patterns
    • DOI 10.1016/0147-5975(90)90085-8
    • F.N. Martin 1990 Taxonomic classification of asexual isolates of Pythium ultimum based on cultural characteristics and mitochondrial DNA restriction patterns Exp Mycol 14 47 56 (Pubitemid 20169195)
    • (1990) Experimental Mycology , vol.14 , Issue.1 , pp. 47-56
    • Martin, F.N.1
  • 20
    • 0028954760 scopus 로고
    • Meiotic instability of Pythium sylvaticum as demonstrated by inheritance of nuclear markers and karyotype analysis
    • F.N. Martin 1995 Meiotic instability of Pythium sylvaticum as demonstrated by inheritance of nuclear markers and karyotype analysis Genetics 139 1233 1246
    • (1995) Genetics , vol.139 , pp. 1233-1246
    • Martin, F.N.1
  • 21
    • 0010837105 scopus 로고    scopus 로고
    • Phylogenetic relationships among some Pythium species inferred from sequence analysis of the mitochondrially encoded cytochrome oxidase II gene
    • F.N. Martin 2000 Phylogenetic relationships among some Pythium species inferred from sequence analysis of the mitochondrially encoded cytochrome oxidase II gene Mycologia 92 711 727
    • (2000) Mycologia , vol.92 , pp. 711-727
    • Martin, F.N.1
  • 22
    • 0033566564 scopus 로고    scopus 로고
    • Phylogenetic relationships of Pythium species based on ITS and 5.8S sequences of the ribosomal DNA
    • C. Matsumoto K. Kageyama H. Suga M. Hyakumachi 1999 Phylogenetic relationships of Pythium species based on ITS and 5.8S sequences of the ribosomal DNA Mycoscience 40 321 331
    • (1999) Mycoscience , vol.40 , pp. 321-331
    • Matsumoto, C.1    Kageyama, K.2    Suga, H.3    Hyakumachi, M.4
  • 23
    • 0034486812 scopus 로고    scopus 로고
    • Intraspecific DNA polymorphisms of Pythium irregulare
    • DOI 10.1017/S0953756200002744
    • C. Matsumoto K. Kageyama H. Suga M. Hyakumachi 2000 Intraspecific DNA polymorphisms of Pythium irregulare Mycol Res 104 1333 1341 (Pubitemid 32102795)
    • (2000) Mycological Research , vol.104 , Issue.11 , pp. 1333-1341
    • Matsumoto, C.1    Kageyama, K.2    Suga, H.3    Hyakumachi, M.4
  • 24
    • 84987028520 scopus 로고
    • Characteristics and pathogenicity of Pythium spp. associated with damping-off of sugar beet in Ireland
    • E. O'sullivan J.A. Kavanagh 1992 Characteristics and pathogenicity of Pythium spp. associated with damping-off of sugar beet in Ireland Plant Pathol 41 582 590
    • (1992) Plant Pathol , vol.41 , pp. 582-590
    • O'Sullivan, E.1    Kavanagh, J.A.2
  • 25
    • 33746119911 scopus 로고    scopus 로고
    • Intraspecific variability of Pythium myriotylum isolated from cocoyam and other host crops
    • DOI 10.1016/j.mycres.2005.12.002, PII S0953756206000761
    • A. Perneel J.T. Tambong A. Adiobo C. Floren F. Saborío A. Lévesque M. Höfte 2006 Intraspecific variability of Pythium myriotylum isolated from cocoyam and other host crops Mycol Res 110 583 593 (Pubitemid 44081761)
    • (2006) Mycological Research , vol.110 , Issue.5 , pp. 583-593
    • Perneel, M.1    Tambong, J.T.2    Adiobo, A.3    Floren, C.4    Saborio, F.5    Levesque, A.6    Hofte, M.7
  • 26
    • 0034153416 scopus 로고    scopus 로고
    • The complete DNA sequence of the nuclear ribosomal RNA gene complex of Verricillium dahliae: Intraspecific heterogeneity within the intergenic spacer region
    • DOI 10.1006/fgbi.1999.1178
    • P.V. Pramateftaki P.P. Antoniou M.A. Typas 2000 The complete DNA sequence of the nuclear ribosomal RNA gene complex of Verticillium dahliae: intraspecific heterogeneity within the intergenic spacer region Fungal Genet Biol 29 19 27 (Pubitemid 30221140)
    • (2000) Fungal Genetics and Biology , vol.29 , Issue.1 , pp. 19-27
    • Pramateftaki, P.V.1    Antoniou, P.P.2    Typas, M.A.3
  • 28
    • 1842848046 scopus 로고    scopus 로고
    • Characterization of subrepeat regions within rDNA intergenic spacers of the edible basidiomycete Lentinula edodes
    • T. Saito N. Tanaka T. Shinozawa 2002 Characterization of subrepeat regions within rDNA intergenic spacers of the edible basidiomycete Lentinula edodes Biosci Biotechnol Biochem 66 2125 2133 (Pubitemid 39251214)
    • (2002) Bioscience, Biotechnology and Biochemistry , vol.66 , Issue.10 , pp. 2125-2133
    • Saito, T.1    Tanaka, N.2    Shinozawa, T.3
  • 29
    • 0028321247 scopus 로고
    • Self-sterile isolates of Pythium mate with self-fertile isolates of Pythium ultimum
    • G.A. Saunders J.G. Hancock 1994 Self-sterile isolates of Pythium mate with self-fertile isolates of Pythium ultimum Mycologia 86 660 666
    • (1994) Mycologia , vol.86 , pp. 660-666
    • Saunders, G.A.1    Hancock, J.G.2
  • 30
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • DOI 10.1093/nar/25.24.4876
    • J.D. Thompson T.J. Gibson F. Plewniak F. Jeanmougin D.G. Higgins 1997 The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analyses tools Nucleic Acids Res 25 4876 4882 (Pubitemid 28022245)
    • (1997) Nucleic Acids Research , vol.25 , Issue.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 32
    • 0031463285 scopus 로고    scopus 로고
    • Molecular characterization of Pythium species based on RFLP analysis of the internal transcribed spacer region of ribosomal DNA
    • DOI 10.1006/pmpp.1997.0109
    • P.H. Wang J.G. White 1997 Molecular characterization of Pythium species based on RFLP analysis of the internal transcribed spacer region of ribosomal DNA Physiol Mol Plant Pathol 51 129 143 (Pubitemid 28031038)
    • (1997) Physiological and Molecular Plant Pathology , vol.51 , Issue.2 , pp. 129-143
    • Wang, P.H.1    White, J.G.2
  • 33
    • 0001305794 scopus 로고
    • Distribution and population of Pythium species in the northern and southern parts of Japan
    • T. Watanabe 1981 Distribution and population of Pythium species in the northern and southern parts of Japan Ann Phytopathol Soc Jpn 47 449 456
    • (1981) Ann Phytopathol Soc Jpn , vol.47 , pp. 449-456
    • Watanabe, T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.