-
1
-
-
0141592720
-
Characterization of a theta-type plasmid from Lactobacillus sakei: a potential basis for low-copy-number vectors in lactobacilli
-
Alpert C.A., Crutz-Le Coq A.M., Malleret C., and Zagorec M. Characterization of a theta-type plasmid from Lactobacillus sakei: a potential basis for low-copy-number vectors in lactobacilli. Appl. Environ. Microbiol. 69 (2003) 5574-5584
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 5574-5584
-
-
Alpert, C.A.1
Crutz-Le Coq, A.M.2
Malleret, C.3
Zagorec, M.4
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S.F., Gish W., Miller W., Myers E.W., and Lipman D.J. Basic local alignment search tool. J. Mol. Biol. 215 (1990) 403-410
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
40549099328
-
Two different tetracycline resistance mechanisms, plasmid-carried tet(L) and chromosomally located transposon-associated tet(M), coexist in Lactobacillus sakei Rits 9
-
Ammor M.S., Gueimonde M., Danielsen M., Zagorec M., van Hoek A.H.A.M., de los Reyes-Gavilán C.G., Mayo B., and Margolles A. Two different tetracycline resistance mechanisms, plasmid-carried tet(L) and chromosomally located transposon-associated tet(M), coexist in Lactobacillus sakei Rits 9. Appl. Environ. Microbiol. 74 (2008) 1394-1401
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 1394-1401
-
-
Ammor, M.S.1
Gueimonde, M.2
Danielsen, M.3
Zagorec, M.4
van Hoek, A.H.A.M.5
de los Reyes-Gavilán, C.G.6
Mayo, B.7
Margolles, A.8
-
4
-
-
28644443758
-
The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K
-
Chaillou S., Champomier-Vergés M.C., Cornet M., Coq A.M.C.L., Dudez A.M., Martin V., Beaufils S., Darbon-Rongére E., Bossy R., Loux V., and Zagorec M. The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K. Nat. Biotechnol. 23 (2005) 1527-1533
-
(2005)
Nat. Biotechnol.
, vol.23
, pp. 1527-1533
-
-
Chaillou, S.1
Champomier-Vergés, M.C.2
Cornet, M.3
Coq, A.M.C.L.4
Dudez, A.M.5
Martin, V.6
Beaufils, S.7
Darbon-Rongére, E.8
Bossy, R.9
Loux, V.10
Zagorec, M.11
-
6
-
-
26644463224
-
The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen
-
Chiu C.H., Tang P., Hu C.C., Bao Q., Yu J., Chou Y.Y., Wang H.S., and Lee Y.-S. The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen. Nucleic Acids Res. 33 (2005) 2351
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 2351
-
-
Chiu, C.H.1
Tang, P.2
Hu, C.C.3
Bao, Q.4
Yu, J.5
Chou, Y.Y.6
Wang, H.S.7
Lee, Y.-S.8
-
7
-
-
0027213363
-
Rolling circle-replicating plasmids from Gram-positive and Gram-negative bacteria: a wall falls
-
del Solar G., Moscoso M., and Espinosa M. Rolling circle-replicating plasmids from Gram-positive and Gram-negative bacteria: a wall falls. Mol. Microbiol. 8 (1993) 789-796
-
(1993)
Mol. Microbiol.
, vol.8
, pp. 789-796
-
-
del Solar, G.1
Moscoso, M.2
Espinosa, M.3
-
8
-
-
1242328685
-
A classification scheme for mobilization regions of bacterial plasmids
-
Francia M.V., Varsaki A., Garcillan-Barcia M.P., Latorre A., Drainas C., and De la Cruz F. A classification scheme for mobilization regions of bacterial plasmids. FEMS Microbiol. Rev. 28 (2004) 79-100
-
(2004)
FEMS Microbiol. Rev.
, vol.28
, pp. 79-100
-
-
Francia, M.V.1
Varsaki, A.2
Garcillan-Barcia, M.P.3
Latorre, A.4
Drainas, C.5
De la Cruz, F.6
-
9
-
-
67349181470
-
A novel bacteriocin with a broad antimicrobial spectrum produced by Lactobacillus sakei C2
-
Gao Y., Jia S., and Tan Z. A novel bacteriocin with a broad antimicrobial spectrum produced by Lactobacillus sakei C2. J. Biotechnol. 136 (2008) S323
-
(2008)
J. Biotechnol.
, vol.136
-
-
Gao, Y.1
Jia, S.2
Tan, Z.3
-
10
-
-
0039985836
-
The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator
-
Gomis-Rüth F.X., Solá M., Acebo P., Párraga A., Guasch A., Eritja R., González A., Espinosa M., de Solar G., and Coll M. The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator. EMBO J. 17 (1998) 7404-7415
-
(1998)
EMBO J.
, vol.17
, pp. 7404-7415
-
-
Gomis-Rüth, F.X.1
Solá, M.2
Acebo, P.3
Párraga, A.4
Guasch, A.5
Eritja, R.6
González, A.7
Espinosa, M.8
de Solar, G.9
Coll, M.10
-
11
-
-
0031557388
-
The mobilization protein, MobM, of the streptococcal plasmid pMV158 specifically cleaves supercoiled DNA at the plasmid oriT
-
Guzmán L.M., and Espinosa M. The mobilization protein, MobM, of the streptococcal plasmid pMV158 specifically cleaves supercoiled DNA at the plasmid oriT. J. Mol. Biol. 266 (1997) 688-702
-
(1997)
J. Mol. Biol.
, vol.266
, pp. 688-702
-
-
Guzmán, L.M.1
Espinosa, M.2
-
12
-
-
33646884167
-
Characterization of a novel type of MLSB resistance plasmid from Staphylococcus saprophyticus carrying a constitutively expressed erm(C) gene
-
Hauschild T., Lüthje P., and Schwarz S. Characterization of a novel type of MLSB resistance plasmid from Staphylococcus saprophyticus carrying a constitutively expressed erm(C) gene. Vet. Microbiol. 115 (2006) 258-263
-
(2006)
Vet. Microbiol.
, vol.115
, pp. 258-263
-
-
Hauschild, T.1
Lüthje, P.2
Schwarz, S.3
-
13
-
-
34047146480
-
Interactions between the RepB initiator protein of plasmid pMV158 and two distant DNA regions within the origin of replication
-
Ruiz-Masó J.A., Lurz R., Espinosa M., and del Solar G. Interactions between the RepB initiator protein of plasmid pMV158 and two distant DNA regions within the origin of replication. Nucleic Acids Res. 35 (2007) 1230-1244
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 1230-1244
-
-
Ruiz-Masó, J.A.1
Lurz, R.2
Espinosa, M.3
del Solar, G.4
-
14
-
-
8844239120
-
Nucleotide sequence and organization of the multiresistance plasmid pSCFS1 from Staphylococcus sciuri
-
Kehrenberg C., Ojo K.K., and Schwarz S. Nucleotide sequence and organization of the multiresistance plasmid pSCFS1 from Staphylococcus sciuri. J. Antimicrob. Chemother. 54 (2004) 936-939
-
(2004)
J. Antimicrob. Chemother.
, vol.54
, pp. 936-939
-
-
Kehrenberg, C.1
Ojo, K.K.2
Schwarz, S.3
-
15
-
-
0031440479
-
Rolling-circle replication of bacterial plasmids
-
Khan S.A. Rolling-circle replication of bacterial plasmids. Microbiol. Mol. Biol. Rev. 61 (1997) 442-455
-
(1997)
Microbiol. Mol. Biol. Rev.
, vol.61
, pp. 442-455
-
-
Khan, S.A.1
-
16
-
-
14544275047
-
Plasmid rolling-circle replication: highlights of two decades of research
-
Khan S.A. Plasmid rolling-circle replication: highlights of two decades of research. Plasmid 53 (2005) 126-136
-
(2005)
Plasmid
, vol.53
, pp. 126-136
-
-
Khan, S.A.1
-
17
-
-
0027244695
-
Characterization and sequence analysis of a small cryptic plasmid from Lactobacillus curvatus LTH683 and its use for construction of new Lactobacillus cloning vectors
-
Klein J.R., Ulrich C., and Plapp R. Characterization and sequence analysis of a small cryptic plasmid from Lactobacillus curvatus LTH683 and its use for construction of new Lactobacillus cloning vectors. Plasmid 30 (1993) 14-29
-
(1993)
Plasmid
, vol.30
, pp. 14-29
-
-
Klein, J.R.1
Ulrich, C.2
Plapp, R.3
-
18
-
-
33646342766
-
Quantitative real-time polymerase chain reaction for determination of plasmid copy number in bacteria
-
Lee C.L., Ow D.S.W., and Oh S.K.W. Quantitative real-time polymerase chain reaction for determination of plasmid copy number in bacteria. J. Microbiol. Methods 65 (2006) 258-267
-
(2006)
J. Microbiol. Methods
, vol.65
, pp. 258-267
-
-
Lee, C.L.1
Ow, D.S.W.2
Oh, S.K.W.3
-
19
-
-
34547164372
-
Comparative sequence analysis of plasmids from Lactobacillus delbrueckii and construction of a shuttle cloning vector
-
Lee J.H., Halgerson J.S., Kim J.H., and O'Sullivan D.J. Comparative sequence analysis of plasmids from Lactobacillus delbrueckii and construction of a shuttle cloning vector. Appl. Environ. Microbiol. 73 (2007) 4417-4424
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 4417-4424
-
-
Lee, J.H.1
Halgerson, J.S.2
Kim, J.H.3
O'Sullivan, D.J.4
-
20
-
-
0025868077
-
Nucleotide sequence and characterization of the broad-host-range lactococcal plasmid pWVO1
-
Leenhouts K.J., Tolner B., Bron S., Kok J., Venema G., and Seegers J.F.M.L. Nucleotide sequence and characterization of the broad-host-range lactococcal plasmid pWVO1. Plasmid 26 (1991) 55-66
-
(1991)
Plasmid
, vol.26
, pp. 55-66
-
-
Leenhouts, K.J.1
Tolner, B.2
Bron, S.3
Kok, J.4
Venema, G.5
Seegers, J.F.M.L.6
-
21
-
-
34249992379
-
Identification and characterization of nine novel types of small staphylococcal plasmids carrying the lincosamide nucleotidyltransferase gene lnu(A)
-
Lüthje P., von Köckritz-Blickwede M., and Schwarz S. Identification and characterization of nine novel types of small staphylococcal plasmids carrying the lincosamide nucleotidyltransferase gene lnu(A). J. Antimicrob. Chemother. 59 (2007) 600-606
-
(2007)
J. Antimicrob. Chemother.
, vol.59
, pp. 600-606
-
-
Lüthje, P.1
von Köckritz-Blickwede, M.2
Schwarz, S.3
-
22
-
-
33846033400
-
CDD: a conserved domain database for interactive domain family analysis
-
Marchler-Bauer A., Anderson J.B., Derbyshire M.K., DeWeese-Scott C., Gonzales N.R., Gwadz M., Hao L., He S., Hurwitz D.I., Jackson J.D., Ke Z., Krylov D., Lanczycki C.J., Liebert C.A., Liu C., Lu F., Lu S., Marchler G.H., Mullokandov M., Song J.S., Thanki N., Yamashita R.A., Yin J.J., Zhang D., and Bryant S.H. CDD: a conserved domain database for interactive domain family analysis. Nucleic Acids Res. 35 (2007) 237-240
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 237-240
-
-
Marchler-Bauer, A.1
Anderson, J.B.2
Derbyshire, M.K.3
DeWeese-Scott, C.4
Gonzales, N.R.5
Gwadz, M.6
Hao, L.7
He, S.8
Hurwitz, D.I.9
Jackson, J.D.10
Ke, Z.11
Krylov, D.12
Lanczycki, C.J.13
Liebert, C.A.14
Liu, C.15
Lu, F.16
Lu, S.17
Marchler, G.H.18
Mullokandov, M.19
Song, J.S.20
Thanki, N.21
Yamashita, R.A.22
Yin, J.J.23
Zhang, D.24
Bryant, S.H.25
more..
-
23
-
-
0027185986
-
Rapid mini-prep isolation of high-quality plasmid DNA from Lactococcus and Lactobacillus spp
-
O'Sullivan D.J., and Klaenhammer T.R. Rapid mini-prep isolation of high-quality plasmid DNA from Lactococcus and Lactobacillus spp. Appl. Environ. Microbiol. 59 (1993) 2730-2733
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 2730-2733
-
-
O'Sullivan, D.J.1
Klaenhammer, T.R.2
-
24
-
-
0035077014
-
Mdt(A), a new efflux protein conferring multiple antibiotic resistance in Lactococcus lactis and Escherichia coli
-
Perreten V., Schwarz F.V., Teuber M., and Levy S.B. Mdt(A), a new efflux protein conferring multiple antibiotic resistance in Lactococcus lactis and Escherichia coli. Antimicrob. Agents Chemother. 45 (2001) 1109-1114
-
(2001)
Antimicrob. Agents Chemother.
, vol.45
, pp. 1109-1114
-
-
Perreten, V.1
Schwarz, F.V.2
Teuber, M.3
Levy, S.B.4
-
25
-
-
0028173003
-
Cryptic plasmids from Lactobacillus helveticus and their evolutionary relationship
-
Pridmore D., Stefanova T., and Mollet B. Cryptic plasmids from Lactobacillus helveticus and their evolutionary relationship. FEMS Microbiol. Lett. 124 (1994) 301-305
-
(1994)
FEMS Microbiol. Lett.
, vol.124
, pp. 301-305
-
-
Pridmore, D.1
Stefanova, T.2
Mollet, B.3
-
26
-
-
67349121415
-
Removal of antibiotic resistance plasmids from Lactobacillus reuteri ATCC 55730 and characterization of the resulting daughter strain L. reuteri DSM 17938
-
Rosander A., Connolly E., and Roos S. Removal of antibiotic resistance plasmids from Lactobacillus reuteri ATCC 55730 and characterization of the resulting daughter strain L. reuteri DSM 17938. Appl. Environ. Microbiol. AEM. (2008) 00991-00998
-
(2008)
Appl. Environ. Microbiol. AEM.
, pp. 00991-00998
-
-
Rosander, A.1
Connolly, E.2
Roos, S.3
-
27
-
-
0004136246
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
Sambrook J., Ffritsch E.F., and Maniatis T. Molecular Cloning: A Laboratory Manual. second ed. (1989), Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
(1989)
Molecular Cloning: A Laboratory Manual. second ed.
-
-
Sambrook, J.1
Ffritsch, E.F.2
Maniatis, T.3
-
28
-
-
0018348785
-
Single-stranded phage replication: positive- and negative-strand DNA synthesis
-
Sims J., Koths S., and Dressler D. Single-stranded phage replication: positive- and negative-strand DNA synthesis. Cold Spring Harbor Symp. Quant. Biol. 43 (1979) 349-365
-
(1979)
Cold Spring Harbor Symp. Quant. Biol.
, vol.43
, pp. 349-365
-
-
Sims, J.1
Koths, S.2
Dressler, D.3
-
29
-
-
1842383697
-
Single-stranded plasmid DNA in Bacillus subtilis and Staphylococcus aureus
-
te Riele H., Michel B., and Ehrlich S.D. Single-stranded plasmid DNA in Bacillus subtilis and Staphylococcus aureus. Proc. Natl. Acad. Sci. USA 83 (1986) 2541-2545
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 2541-2545
-
-
te Riele, H.1
Michel, B.2
Ehrlich, S.D.3
-
30
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
31
-
-
33746277257
-
Technological characterization of a bacteriocin-producing Lactobacillus sakei and its use in fermented sausages production
-
Urso R., Rantsiou K., Cantoni C., Comi G., and Cocolin L. Technological characterization of a bacteriocin-producing Lactobacillus sakei and its use in fermented sausages production. Int. J. Food Microbiol. 110 (2006) 232-239
-
(2006)
Int. J. Food Microbiol.
, vol.110
, pp. 232-239
-
-
Urso, R.1
Rantsiou, K.2
Cantoni, C.3
Comi, G.4
Cocolin, L.5
-
32
-
-
15444375047
-
Functional analysis of three plasmids from Lactobacillus plantarum
-
van Kranenburg R., Golic N., Bongers R., Leer R.J., de Vos W.M., Siezen R.J., and Kleerebezem M. Functional analysis of three plasmids from Lactobacillus plantarum. Appl. Environ. Microbiol. 71 (2005) 1223-1230
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 1223-1230
-
-
van Kranenburg, R.1
Golic, N.2
Bongers, R.3
Leer, R.J.4
de Vos, W.M.5
Siezen, R.J.6
Kleerebezem, M.7
-
33
-
-
0037464988
-
Characterization and heterologous expression of a class IIa bacteriocin, plantaricin 423 from Lactobacillus plantarum 423, in Saccharomyces cerevisiae
-
Van Reenen C.A., Chikindas M.L., Van Zyl W.H., and Dicks L.M.T. Characterization and heterologous expression of a class IIa bacteriocin, plantaricin 423 from Lactobacillus plantarum 423, in Saccharomyces cerevisiae. Int. J. Food Microbiol. 81 (2003) 29-40
-
(2003)
Int. J. Food Microbiol.
, vol.81
, pp. 29-40
-
-
Van Reenen, C.A.1
Chikindas, M.L.2
Van Zyl, W.H.3
Dicks, L.M.T.4
-
34
-
-
47349127547
-
Characterization of a cryptic plasmid pM4 from Lactobacillus plantarum M4
-
Yin S., Hao Y., Zhai Z., Li R., Huang Y., Tian H., and Luo Y. Characterization of a cryptic plasmid pM4 from Lactobacillus plantarum M4. FEMS Microbiol. Lett. 285 (2008) 183-187
-
(2008)
FEMS Microbiol. Lett.
, vol.285
, pp. 183-187
-
-
Yin, S.1
Hao, Y.2
Zhai, Z.3
Li, R.4
Huang, Y.5
Tian, H.6
Luo, Y.7
-
35
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31 (2003) 3406-3415
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|