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Volumn 10, Issue 3, 2009, Pages 779-784

Quantitative PCR assessment of microsatellite and SNP genotyping with variable quality DNA extracts

Author keywords

Carcass; Degraded DNA; Microsatellites; Quantitative PCR; SNP genotyping

Indexed keywords

BIOASSAY; DNA; GENETIC MARKER; GENOTYPE; POLYMERASE CHAIN REACTION; QUANTITATIVE ANALYSIS; REGRESSION ANALYSIS; SALMONID;

EID: 67349237726     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-008-9661-7     Document Type: Article
Times cited : (28)

References (16)
  • 1
    • 0034522610 scopus 로고    scopus 로고
    • Atlantic salmon (Salmo salar L.) and cross-species amplification in other salmonids
    • 10.1046/j.1365-294X.2000.105312.x
    • M Cairney JB Taggart B Hoyheim 2000 Atlantic salmon (Salmo salar L.) and cross-species amplification in other salmonids Mol Ecol 9 2175 2178 10.1046/j.1365-294X.2000.105312.x
    • (2000) Mol Ecol , vol.9 , pp. 2175-2178
    • Cairney, M.1    Taggart, J.B.2    Hoyheim, B.3
  • 2
    • 41349107215 scopus 로고    scopus 로고
    • Identification of novel single nucleotide polymorphisms in Chinook salmon and variation among life history types
    • 10.1577/T07-011.1
    • NR Campbell SR Narum 2008 Identification of novel single nucleotide polymorphisms in Chinook salmon and variation among life history types Trans Am Fish Soc 37 96 106 10.1577/T07-011.1
    • (2008) Trans Am Fish Soc , vol.37 , pp. 96-106
    • Campbell, N.R.1    Narum, S.R.2
  • 3
    • 34247605387 scopus 로고    scopus 로고
    • Quantitative analysis of prey DNA in pinniped faeces: Potential to estimate diet composition?
    • 10.1007/s10592-006-9197-7
    • BE Deagle DJ Tollit 2007 Quantitative analysis of prey DNA in pinniped faeces: potential to estimate diet composition? Conserv Genet 8 743 747 10.1007/s10592-006-9197-7
    • (2007) Conserv Genet , vol.8 , pp. 743-747
    • Deagle, B.E.1    Tollit, D.J.2
  • 4
    • 0033179448 scopus 로고    scopus 로고
    • Five multiplexed microsatellite loci for rapid response run identification of California's endangered winter Chinook salmon
    • 10.1046/j.1365-2052.1999.00445-3.x
    • C Greig MA Banks 1999 Five multiplexed microsatellite loci for rapid response run identification of California's endangered winter Chinook salmon Anim Genet 30 318 320 10.1046/j.1365-2052.1999.00445-3.x
    • (1999) Anim Genet , vol.30 , pp. 318-320
    • Greig, C.1    Banks, M.A.2
  • 5
    • 0041374020 scopus 로고    scopus 로고
    • New tetranucleotide microsatellites for fine-scale discrimination among endangered Chinook salmon (Oncorhynchus tshawytscha)
    • 10.1046/j.1471-8286.2003.00455.x
    • C Greig DP Jacobson MA Banks 2003 New tetranucleotide microsatellites for fine-scale discrimination among endangered Chinook salmon (Oncorhynchus tshawytscha) Mol Ecol Notes 3 376 379 10.1046/j.1471-8286.2003.00455.x
    • (2003) Mol Ecol Notes , vol.3 , pp. 376-379
    • Greig, C.1    Jacobson, D.P.2    Banks, M.A.3
  • 6
    • 33746969232 scopus 로고    scopus 로고
    • A comparison of conservative DNA extraction methods from fins and scales of freshwater fish: A useful tool for conservation genetics
    • 10.1007/s10592-006-9137-6
    • L Lucentini S Caporali A Palomba H Lancioni F Panara 2006 A comparison of conservative DNA extraction methods from fins and scales of freshwater fish: a useful tool for conservation genetics Conserv Genet 7 1009 1012 10.1007/s10592-006-9137-6
    • (2006) Conserv Genet , vol.7 , pp. 1009-1012
    • Lucentini, L.1    Caporali, S.2    Palomba, A.3    Lancioni, H.4    Panara, F.5
  • 7
    • 0036169626 scopus 로고    scopus 로고
    • Polymerase chain reaction inhibition in historical fish scale mounting cards
    • doi :10.1577/1548-8659(2002)131<0109:PCRIIH>2.0.CO;2
    • Moran P, Baker J (2002) Polymerase chain reaction inhibition in historical fish scale mounting cards. Trans Am Fish Soc 131:101-119. doi :10.1577/1548-8659(2002)131<0109:PCRIIH>2.0.CO;2
    • (2002) Trans Am Fish Soc , vol.131 , pp. 101-119
    • Moran, P.1    Baker, J.2
  • 8
    • 35848929259 scopus 로고    scopus 로고
    • Highly accurate SNP genotyping from historical and low-quality samples
    • 10.1111/j.1471-8286.2007.01804.x
    • PA Morin MA McCarthy 2007 Highly accurate SNP genotyping from historical and low-quality samples Mol Ecol Notes 7 937 946 10.1111/j.1471-8286.2007.01804. x
    • (2007) Mol Ecol Notes , vol.7 , pp. 937-946
    • Morin, P.A.1    McCarthy, M.A.2
  • 9
    • 0034915201 scopus 로고    scopus 로고
    • Quantitative polymerase chain reaction analysis of DNA from noninvasive samples for accurate microsatellite genotyping of wild chimpanzees (Pan troglodytes verus)
    • 10.1046/j.0962-1083.2001.01308.x
    • PA Morin KE Chambers C Boesch L Vigilant 2001 Quantitative polymerase chain reaction analysis of DNA from noninvasive samples for accurate microsatellite genotyping of wild chimpanzees (Pan troglodytes verus) Mol Ecol 10 1835 1844 10.1046/j.0962-1083.2001.01308.x
    • (2001) Mol Ecol , vol.10 , pp. 1835-1844
    • Morin, P.A.1    Chambers, K.E.2    Boesch, C.3    Vigilant, L.4
  • 10
    • 34248172939 scopus 로고    scopus 로고
    • Comparative mitochondrial and nuclear quantitative PCR of historical marine mammal tissue, bone, baleen, and tooth samples
    • 10.1111/j.1471-8286.2007.01699.x
    • PA Morin NM Hedrick KM Robertson CA Leduc 2007 Comparative mitochondrial and nuclear quantitative PCR of historical marine mammal tissue, bone, baleen, and tooth samples Mol Ecol Notes 7 404 411 10.1111/j.1471-8286.2007.01699.x
    • (2007) Mol Ecol Notes , vol.7 , pp. 404-411
    • Morin, P.A.1    Hedrick, N.M.2    Robertson, K.M.3    Leduc, C.A.4
  • 11
    • 35848963200 scopus 로고    scopus 로고
    • Genetic variation and structure of Chinook salmon life history types in the Snake river
    • 10.1577/T06-240.1
    • SR Narum JJ Stephenson MR Campbell 2007 Genetic variation and structure of Chinook salmon life history types in the Snake river Trans Am Fish Soc 136 1252 1262 10.1577/T06-240.1
    • (2007) Trans Am Fish Soc , vol.136 , pp. 1252-1262
    • Narum, S.R.1    Stephenson, J.J.2    Campbell, M.R.3
  • 12
    • 0032146798 scopus 로고    scopus 로고
    • Characterization of seven microsatellite loci derived from pink salmon
    • 10.1046/j.1365-294X.1998.00401.x
    • JB Olsen P Bentzen JE Seeb 1998 Characterization of seven microsatellite loci derived from pink salmon Mol Ecol 7 1083 1090 10.1046/j.1365-294X.1998. 00401.x
    • (1998) Mol Ecol , vol.7 , pp. 1083-1090
    • Olsen, J.B.1    Bentzen, P.2    Seeb, J.E.3
  • 13
    • 0034777344 scopus 로고    scopus 로고
    • Thirty-five polymorphic microsatellite markers for rainbow trout (Oncorhynchus mykiss)
    • 10.1046/j.1365-2052.2001.0730b.x
    • CE Rexroad III RL Coleman AM Martin WK Hershberger J Killefer 2001 Thirty-five polymorphic microsatellite markers for rainbow trout (Oncorhynchus mykiss) Anim Genet 32 317 319 10.1046/j.1365-2052.2001.0730b.x
    • (2001) Anim Genet , vol.32 , pp. 317-319
    • Rexroad Iii, C.E.1    Coleman, R.L.2    Martin, A.M.3    Hershberger, W.K.4    Killefer, J.5
  • 14
    • 33646177325 scopus 로고    scopus 로고
    • Use of sequence data from rainbow trout and Atlantic salmon for SNP detection in Pacific salmon
    • 10.1111/j.1365-294X.2005.02731.x
    • CT Smith CM Elfstrom LW Seeb JE Seeb 2005 Use of sequence data from rainbow trout and Atlantic salmon for SNP detection in Pacific salmon Mol Ecol 14 4193 4203 10.1111/j.1365-294X.2005.02731.x
    • (2005) Mol Ecol , vol.14 , pp. 4193-4203
    • Smith, C.T.1    Elfstrom, C.M.2    Seeb, L.W.3    Seeb, J.E.4
  • 15
    • 13844316976 scopus 로고    scopus 로고
    • Use of the 5'-nuclease reaction for single nucleotide polymorphism genotyping in Chinook salmon
    • 10.1577/T04-019.1
    • CT Smith JE Seeb P Schwenke LW Seeb 2005 Use of the 5'nuclease reaction for single nucleotide polymorphism genotyping in Chinook salmon Trans Am Fish Soc 134 207 217 10.1577/T04-019.1
    • (2005) Trans Am Fish Soc , vol.134 , pp. 207-217
    • Smith, C.T.1    Seeb, J.E.2    Schwenke, P.3    Seeb, L.W.4
  • 16
    • 0036216822 scopus 로고    scopus 로고
    • Characterization of microsatellite loci in Chinook salmon (Oncorhynchus tshawytscha) and cross-species amplification in other salmonids
    • 10.1046/j.1471-8286.2002.00129.x
    • KS Williamson JF Cordes B May 2002 Characterization of microsatellite loci in Chinook salmon (Oncorhynchus tshawytscha) and cross-species amplification in other salmonids Mol Ecol Notes 2 17 19 10.1046/j.1471-8286. 2002.00129.x
    • (2002) Mol Ecol Notes , vol.2 , pp. 17-19
    • Williamson, K.S.1    Cordes, J.F.2    May, B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.