Complete sequence and analysis of the stability functions of pPSX, a vector that allows stable cloning and expression of Streptomycete genes in Escherichia coli K12

Plasmid

Volumn 62, Issue 1, 2009, Pages 39-43

  Philip, Daniel S ^a   Sarovich, Derek S ^a   Pemberton, John M ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

Complete sequence; E. coli; pPSX; Stable vector; Streptomyces

Indexed keywords

PLASMID VECTOR; PROTEINASE ACTIVATED RECEPTOR;

ARTICLE; ESCHERICHIA COLI; GENE EXPRESSION; GENE SEQUENCE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OPERON; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; STREPTOMYCETACEAE;

BASE SEQUENCE; CHROMOSOME MAPPING; CLONING, MOLECULAR; DOWN-REGULATION; DRUG RESISTANCE, BACTERIAL; ESCHERICHIA COLI; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; GENETIC VECTORS; PLASMIDS; SEQUENCE ANALYSIS, DNA; STREPTOMYCETACEAE; TRIMETHOPRIM;

ESCHERICHIA COLI; STREPTOMYCES; STREPTOMYCINEAE;

EID: 67349205467     PISSN: 0147619X     EISSN: 10959890     Source Type: Journal    
DOI: 10.1016/j.plasmid.2009.03.002     Document Type: Article

References (33)

1. Adamczyk M., Dolowy P., Jonczyk M., Thomas C.M., and Jagura-Burdzy G. The kfrA gene is the first in a tricistronic operon required for survival of IncP-1 plasmid R751. Microbiology 152 6 (2006) 1621-1637
2. August P.R., Grossman T.H., Minor C., Draper M.P., Macnell I.A., Pemberton J.M., Call K.M., Holt D., and Osbourne M.S. Sequence analysis and functional characterisation of the violacein biosynthetic pathway from Chromobacterium violaceum. J. Microb. Biotechnol. 2 (2000) 513-519
3. Balibar C.J., and Walsh C.T. In vitro biosynthesis of violacein from L-tryptophan by the enzymes VioA-E from Chromobacterium violaceum. Biochemistry 45 51 (2006) 15444-15457
4. Collis C.M., Kim M.J., Stokes H.W., and Hall R.M. Binding of the purified integron DNA integrase Intl1 to integron- and cassette-associated recombination sites. Mol. Microbiol. 29 2 (1998) 477-490
5. Ebersbach G., and Gerdes K. Plasmid segregation. Mech. Annu. Rev. Genet. 39 (2005) 453-479
6. Fernández-López R., Garcillán-Barcia M.P., Revilla C., Lázaro M., Vielva L., and de la Cruz F. Dynamics of the IncW genetic backbone imply general trends in conjugative plasmid evolution. FEMS Microbiol. Rev. 30 6 (2006) 942-966
7. Funnell B.E. Partition-mediated plasmid pairing. Plasmid 53 (2005) 119-125
8. Gillings M., Boucher Y., Labbate M., Holmes A., Krishnan S., Holley M., and Stokes H.W. The evolution of class 1 integrons and the rise of antibiotic resistance. J. Bacteriol. 190 14 (2008) 5095-5100
9. Godfrin-Estevenon A.M., Pasta F., and Lane D. The parAB gene products of Pseudomonas putida exhibit partition activity in both P. putida and Escherichia coli. Mol. Microbiol. 43 1 (2002) 39-49
10. Gordon G., and Wright A. DNA segregation in bacteria. Annu. Rev. Microbiol. 54 (2000) 681-708
11. Hohn B., and Collins J. A small cosmid for efficient cloning of large DNA fragments. Gene 11 3-4 (1980) 291-298
12. Hyun C.G., Bililign T., Liao J., and Thorson J.S. The biosynthesis of indolocarbazoles in a heterologous E. coli host. Chembiochem 4 (2003) 114-117
13. Kim S.Y., Park J.S., Chae C.S., Hyun C.G., Choi B.W., Shin J., and Oh KB. Genetic organization of the biosynthetic gene cluster for the indolocarbazole K-252a in Nonomuraea longicatena JCM 11136. Appl. Microbiol. Biotechnol. 75 5 (2007) 1119-1126
14. Kobayashi I. Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution. Nucleic Acids Res. 29 18 (2001) 3742-3756
15. Laravllaand P., and Fernandodela C. Physical and genetic map of the IncW plasmid R388. Plasmid 20 (1988) 155-157
16. LeBard R.J., Jensen S.O., Arnaiz I.A., Skurray R.A., and Firth N.A. Multimer resolution system contributes to segregational stability of the prototypical staphylococcal conjugative multiresistance plasmid pSK41. FEMS Microbiol. Lett. 284 1 (2008) 58-67
17. Lukaszewicz M., Kostelidou K., Bartosik A.A., Cooke G.D., Thomas C.M., and Jagura-Burdzy G. Functional dissection of the ParB homologue (KorB) from IncP-1 plasmid RK2. Nucleic Acids Res. 30 4 (2002) 1046-1055
18. Moncalián G., and de la Cruz F. DNA binding properties of protein TrwA, a possible structural variant of the Arc repressor superfamily. Biochim. Biophys. Acta 1701 1-2 (2004) 15-23
19. Okumura M.S., and Kado C.I. The region essential for efficient autonomous replication of pSa in Escherichia coli. Mol. Gen. Genet. 235 1 (1992) 55-63
20. Paterson E.S., Moré M.I., Pillay G., Cellini C., Woodgate R., Walker G.C., Iyer V.N., and Winans S.C. Genetic analysis of the mobilization and leading regions of the IncN plasmids pKM101 and pCU1. J. Bacteriol. 181 8 (1999) 2572-2583
21. Paulsen I.T., Littlejohn T.G., Radström P., Sundström L., Sköld O., Swedberg G., and Skurray R. The 3′conserved segment of integrons contains a gene associated with multidrug resistance to antiseptics and disinfectants. Antimicrob. Agents Chemother. 37 4 (1993) 761-768
22. Pemberton J.M., Vincent K.M., and Penfold R.J. Cloning and heterologous expression of the violacein biosynthesis gene cluster from Chromobacterium violaceum. Curr. Microbiol. 22 (1991) 355-358
23. Philip D.S., Sarovich D.S., and Pemberton J.M. PPSY: a vector for the stable cloning and expression of streptomycete single gene phenotypes in Escherichia coli. Plasmid 60 1 (2008) 53-58
24. Revilla C., Garcillán-Barcia M.P., Fernández-López R., Thomson N.R., Sanders M., Cheung M., Thomas C.M., and de la Cruz F. Different pathways to acquiring resistance genes illustrated by the recent evolution of IncW plasmids. Antimicrob. Agents Chemother. 52 4 (2008) 1472-1480
25. Sarovich D.S., and Pemberton J.M. PPSX: a novel vector for the cloning and heterologous expression of antitumor antibiotic gene clusters. Plasmid 57 (2007) 306-313
26. Schumacher M.A., and Funnell B.E. Structures of ParB bound to DNA reveal mechanism of partition complex formation. Nature 438 7067 (2009) 516-519
27. Sota M., Yano H., Nagata Y., Ohtsubo Y., Genka H., Anbutsu H., Kawasaki H., and Tsuda M. Functional analysis of unique class II insertion sequence IS1071. Appl. Environ. Microbiol. 72 1 (2006) 291-297
28. Sun J., Hesketh A., and Bibb M. Functional analysis of relA and rshA, two relA/spoT homologues of Streptomyces coelicolor A3(2). J. Bacteriol. 183 11 (2001) 3488-3498
29. Sundstroem L., Radstroem P., Swedberg G., and Skoeld O. Site-specific recombination promotes linkage between trimethoprim-and sulfonamide resistance genes. Sequence characterization of dhfrV and sulI and a recombination active locus of Tn21. Mol. Gen. Genet. 213 (1988) 191-201
30. Swift G., McCarthy B.J., and Heffron F. DNA sequence of a plasmid-encoded dihydrofolate reductase. Mol. Gen. Genet. 181 4 (1981) 441-447
31. Sykes R.B., and Richmond M.H. The intergeneric transfer of a b-lactamase gene between Pseudomonas aeruginosa and Escherichia coli. Nature (London) 226 (1970) 952-954
32. Tabuchi A., Min Y.N., Womble D.D., and Rownd R.H. Autoregulation of the stability operon of IncFII plasmid NR1. J. Bacteriol. 174 23 (1992) 7629-7634
33. Yanisch-Perron C., Vieira J., and Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33 (1985) 103-119