A regulatory polymorphism in interferon-γ receptor 1 promoter is associated with the susceptibility to chronic hepatitis B virus infection

Immunogenetics

Volumn 61, Issue 6, 2009, Pages 423-430

  Zhou, Jie ^a   Chen, Ding Qiang ^a   Poon, Vincent K M ^a   Zeng, Yong ^a   Ng, Fai ^a   Lu, Liwei ^a   Huang, Jian Dong ^a   Yuen, Kwok Yung ^a,b   Zheng, Bo Jian ^a  

^a UNIVERSITY OF HONG KONG   (Hong Kong)

^b NORTHERN CALIFORNIA INSTITUTE FOR RESEARCH AND EDUCATION   (United States)

Author keywords

HBV infection; IFNGR1; Promoter activity; SNP; Transcription regulation

Indexed keywords

GAMMA INTERFERON; GAMMA INTERFERON RECEPTOR 1;

ALLELE; ARTICLE; CELL STRAIN HEPG2; CHINESE; CHRONIC HEPATITIS; CONTROLLED STUDY; GENETIC TRANSCRIPTION; HEPATITIS B; HUMAN; HUMAN CELL; INFECTION SENSITIVITY; LIGAND BINDING; MAJOR CLINICAL STUDY; PERSISTENT VIRUS INFECTION; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROMOTER REGION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SIGNAL TRANSDUCTION; SINGLE NUCLEOTIDE POLYMORPHISM;

CELL LINE; CELL LINE, TUMOR; CHI-SQUARE DISTRIBUTION; GENE FREQUENCY; GENETIC PREDISPOSITION TO DISEASE; GENOTYPE; HELA CELLS; HEPATITIS B, CHRONIC; HUMANS; LOGISTIC MODELS; LUCIFERASES; LUMINESCENT MEASUREMENTS; ODDS RATIO; POLYMORPHISM, SINGLE NUCLEOTIDE; PROMOTER REGIONS, GENETIC; RECEPTORS, INTERFERON; SEQUENCE ANALYSIS, DNA; TRANSFECTION;

ANIMALIA; HEPATITIS B VIRUS;

EID: 67349184045     PISSN: 00937711     EISSN: 14321211     Source Type: Journal    
DOI: 10.1007/s00251-009-0377-8     Document Type: Article

References (29)

1. W Abbott E Gane I Winship S Munn C Tukuitonga 2007 Polymorphism in intron 1 of the interferon-gamma gene influences both serum immunoglobulin E levels and the risk for chronic hepatitis B virus infection in Polynesians Immunogenetics 59 187 195 10.1007/s00251-006-0184-4
2. M Aoki E Matsui H Kaneko R Inoue T Fukao M Watanabe T Teramoto Z Kato K Suzuki Y Suzuki K Kasahara N Kondo 2003 A novel single-nucleotide substitution, Leu 467 Pro, in the interferon-gamma receptor 1 gene associated with allergic diseases Int J Mol Med 12 185 191
3. B Basturk Z Karasu M Kilic S Ulukaya S Boyacioglu B Oral 2008 Association of TNF-alpha -308 polymorphism with the outcome of hepatitis B virus infection in Turkey Infect Genet Evol 8 20 25 10.1016/j.meegid.2007.09.001
4. Z Ben-Ari E Mor O Papo B Kfir J Sulkes AR Tambur R Tur-Kaspa T Klein 2003 Cytokine gene polymorphisms in patients infected with hepatitis B virus Am J Gastroenterol 98 144 150 10.1111/j.1572-0241.2003.07179.x
5. L Bulat-Kardum GE Etokebe J Knezevic S Balen N Matakovic-Mileusnic L Zaputovic J Pavelic Z Beg-Zec Z Dembic 2006 Interferon-gamma receptor-1 gene promoter polymorphisms (G-611A; T-56C) and susceptibility to tuberculosis Scand J Immunol 63 142 150 10.1111/j.1365-3083.2005.01694.x
6. GY Chen Z Chen MW Li HM Liu ZR Hu 2003 Modulation and implications in pathogenesis of interferon gamma receptor 1 in patients with chronic hepatitis B Zhonghua Gan Zang Bing Za Zhi 11 14 16
7. JY Cheong SW Cho SG Chung JA Lee M Yeo HJ Wang JE Lee KB Hahm JH Kim 2006 Genetic polymorphism of interferon-gamma, interferon-gamma receptor, and interferon regulatory factor-1 genes in patients with hepatitis B virus infection Biochem Genet 44 246 255 10.1007/s10528-006-9029-y
8. GS Cooke SJ Campbell J Sillah P Gustafson B Bah G Sirugo S Bennett KP McAdam O Sow C Lienhardt AV Hill 2006 Polymorphism within the interferon-gamma/receptor complex is associated with pulmonary tuberculosis Am J Respir Crit Care Med 174 339 343 10.1164/rccm.200601-088OC
9. G Deng G Zhou Y Zhai S Li X Li Y Li R Zhang Z Yao Y Shen B Qiang Y Wang F He 2004 Association of estrogen receptor alpha polymorphisms with susceptibility to chronic hepatitis B virus infection Hepatology 40 318 326 10.1002/hep. 20318 (Pubitemid 39062849)
10. T Du XH Guo XL Zhu JH Li LP Lu JR Gao CY Gou Z Li Y Liu H Li 2006 Association of TNF-alpha promoter polymorphisms with the outcomes of hepatitis B virus infection in Chinese Han population J Viral Hepatitis 13 618 624 10.1111/j.1365-2893.2006.00731.x
11. AJ Frodsham L Zhang U Dumpis NA Taib S Best A Durham BJ Hennig S Hellier S Knapp M Wright M Chiaramonte JI Bell M Graves HC Whittle HC Thomas MR Thursz AV Hill 2006 Class II cytokine receptor gene cluster is a major locus for hepatitis B persistence Proc Natl Acad Sci U S A 103 9148 9153 10.1073/pnas.0602800103
12. LG Guidotti T Ishikawa MV Hobbs B Matzke R Schreiber FV Chisari 1996 Intracellular inactivation of the hepatitis B virus by cytotoxic T lymphocytes Immunity 4 25 36 10.1016/S1074-7613(00) 80295-2 (Pubitemid 26054933)
13. LG Guidotti R Rochford J Chung M Shapiro R Purcell FV Chisari 1999 Viral clearance without destruction of infected cells during acute HBV infection Science 284 825 829 10.1126/science.284.5415.825
14. T Hohler A Kruger G Gerken PM Schneider Meyer zum Buschenefelde KH C Rittner 1998 A tumor necrosis factor-alpha (TNF-alpha) promoter polymorphism is associated with chronic hepatitis B infection Clin Exp Immunol 111 579 582 10.1046/j.1365-2249.1998.00534.x
15. S Juliger M Bongartz AJ Luty PG Kremsner JF Kun 2003 Functional analysis of a promoter variant of the gene encoding the interferon-gamma receptor chain I Immunogenetics 54 675 680 (Pubitemid 36188532)
16. YJ Kim HS Lee JH Yoon CY Kim MH Park LH Kim BL Park HD Shin 2003 Association of TNF-alpha promoter polymorphisms with the clearance of hepatitis B virus infection Hum Mol Genet 12 2541 2546 10.1093/hmg/ddg262
17. JC Knight I Udalova AV Hill BM Greenwood N Peshu K Marsh D Kwiatkowski 1999 A polymorphism that affects OCT-1 binding to the TNF promoter region is associated with severe malaria Nat Genet 22 145 150 10.1038/9649
18. O Koch A Awomoyi S Usen M Jallow A Richardson J Hull M Pinder M Newport D Kwiatkowski 2002 IFNGR1 gene promoter polymorphisms and susceptibility to cerebral malaria J Infect Dis 185 1684 1687 10.1086/340516
19. O Koch DP Kwiatkowski IA Udalova 2006 Context-specific functional effects of IFNGR1 promoter polymorphism Hum Mol Genet 15 1475 1481 10.1093/hmg/ddl071
20. M Liu B Cao H Zhang Y Dai X Liu C Xu 2006 Association of interferon-gamma gene haplotype in the Chinese population with hepatitis B virus infection Immunogenetics 58 859 864 10.1007/s00251-006-0161-y
21. A Matsuda N Ebihara N Kumagai K Fukuda K Ebe K Hirano C Sotozono M Tei K Hasegawa M Shimizu M Tamari K Namba S Ohno N Mizuki Z Ikezawa T Shirakawa J Hamuro S Kinoshita 2007 Genetic polymorphisms in the promoter of the interferon gamma receptor 1 gene are associated with atopic cataracts Invest Ophthalmol Vis Sci 48 583 589 10.1167/iovs.06-0991
22. F Novelli P Bernabei L Ozmen L Rigamonti A Allione S Pestka G Garotta G Forni 1996 Switching on of the proliferation or apoptosis of activated human T lymphocytes by IFN-gamma is correlated with the differential expression of the alpha- and beta-chains of its receptor J Immunol 157 1935 1943 (Pubitemid 126449666)
23. SD Rosenzweig AA Schaffer L Ding R Sullivan B Enyedi JJ Yim JL Cook JM Musser SM Holland 2004 Interferon-gamma receptor 1 promoter polymorphisms: population distribution and functional implications Clin Immunol 112 113 119 10.1016/j.clim.2004.03.018
24. PV Suneetha SK Sarin A Goyal GT Kumar DK Shukla S Hissar 2006 Association between vitamin D receptor, CCR5, TNF-alpha and TNF-beta gene polymorphisms and HBV infection and severity of liver disease J Hepatol 44 856 863 10.1016/j.jhep. 2006.01.028
25. Y Tanaka H Nakashima C Hisano T Kohsaka Y Nemoto H Niiro T Otsuka T Otsuka T Imamura Y Niho 1999 Association of the interferon-gamma receptor variant (Val14Met) with systemic lupus erythematosus Immunogenetics 49 266 271 10.1007/s002510050492
26. G Tau P Rothman 1999 Biologic functions of the IFN-gamma receptors Allergy 54 1233 1251 10.1034/j.1398-9995.1999.00099.x
27. CL Thio DL Thomas P Karacki X Gao D Marti RA Kaslow JJ Goedert M Hilgartner SA Strathdee P Duggal SJ O'Brien J Astemborski M Carrington 2003 Comprehensive analysis of class I and class II HLA antigens and chronic hepatitis B virus infection J Virol 77 12083 12087 10.1128/JVI.77.22.12083- 12087.2003
28. S Wieland R Thimme RH Purcell FV Chisari 2004 Genomic analysis of the host response to hepatitis B virus infection Proc Natl Acad Sci U S A 101 6669 6674 10.1073/pnas.0401771101
29. J Zhou L Lu MF Yuen TW Lam CP Chung CL Lam B Zhang S Wang Y Chen SH Wu VK Poon F Ng CC Chan S Jiang KY Yuen BJ Zheng 2007 Polymorphisms of type I interferon receptor 1 promoter and their effects on chronic hepatitis B virus infection J Hepatol 46 198 205 10.1016/j.jhep. 2006.08.017 (Pubitemid 44959152)