-
1
-
-
0038219512
-
Haplotyping as perfect phylogeny: A direct approach
-
Bafna V., Gusfield D., Lancia G., and Yooseph S. Haplotyping as perfect phylogeny: A direct approach. Journal of Computational Biology 10 3-4 (2003) 323-340
-
(2003)
Journal of Computational Biology
, vol.10
, Issue.3-4
, pp. 323-340
-
-
Bafna, V.1
Gusfield, D.2
Lancia, G.3
Yooseph, S.4
-
2
-
-
0025269067
-
Inference of haplotypes from PCR-amplified samples of diploid populations
-
Clark A. Inference of haplotypes from PCR-amplified samples of diploid populations. Molecular Biology and Evolution 7 (1990) 111-122
-
(1990)
Molecular Biology and Evolution
, vol.7
, pp. 111-122
-
-
Clark, A.1
-
3
-
-
0034791035
-
High-resolution haplotype structure in the human genome
-
Daly M., Rioux J., Schaffner S., Hudson T., and Lander E. High-resolution haplotype structure in the human genome. Nature Genetics 29 2 (2001) 229-232
-
(2001)
Nature Genetics
, vol.29
, Issue.2
, pp. 229-232
-
-
Daly, M.1
Rioux, J.2
Schaffner, S.3
Hudson, T.4
Lander, E.5
-
4
-
-
0029130796
-
Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population
-
Excoffer L., and Slatkin M. Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population. Molecular Biology and Evolution 12 5 (1995) 912-917
-
(1995)
Molecular Biology and Evolution
, vol.12
, Issue.5
, pp. 912-917
-
-
Excoffer, L.1
Slatkin, M.2
-
5
-
-
18444369013
-
The structure of haplotype blocks in the human genome
-
Gabriel S., Schaffner S., Nguyen H., Moore J., Roy J., Blumenstiel B., Higgins J., DeFelice M., Lochner A., Faggart M., Liu-Cordero S., Rotimi C., Adeyemo A., Cooper R., Ward R., Lander E., Daly M., and Altshuler D. The structure of haplotype blocks in the human genome. Science 296 (2002)
-
(2002)
Science
, vol.296
-
-
Gabriel, S.1
Schaffner, S.2
Nguyen, H.3
Moore, J.4
Roy, J.5
Blumenstiel, B.6
Higgins, J.7
DeFelice, M.8
Lochner, A.9
Faggart, M.10
Liu-Cordero, S.11
Rotimi, C.12
Adeyemo, A.13
Cooper, R.14
Ward, R.15
Lander, E.16
Daly, M.17
Altshuler, D.18
-
6
-
-
33846524472
-
Characterization of the existence of galled-tree networks
-
Gupta A., Maňuch J., Stacho L., and Zhao X. Characterization of the existence of galled-tree networks. Journal of Bioinformatics and Computational Biology 4 6 (2006) 1309-1328
-
(2006)
Journal of Bioinformatics and Computational Biology
, vol.4
, Issue.6
, pp. 1309-1328
-
-
Gupta, A.1
Maňuch, J.2
Stacho, L.3
Zhao, X.4
-
7
-
-
34547442890
-
Algorithm for haplotype inferring via galled-tree networks with simple galls (extended abstract)
-
S. Istrail, P. Pevzner, M. Waterman Eds, Proc. of International Symposium on Bioinformatics Research and Applications, ISBRA
-
A. Gupta, J. Maňuch, L. Stacho, X. Zhao, Algorithm for haplotype inferring via galled-tree networks with simple galls (extended abstract), in: S. Istrail, P. Pevzner, M. Waterman (Eds.), Proc. of International Symposium on Bioinformatics Research and Applications, ISBRA, in: Lecture Notes in Bioinformatics, vol. 4463, 2007, pp. 121-132
-
(2007)
Lecture Notes in Bioinformatics
, vol.4463
, pp. 121-132
-
-
Gupta, A.1
Maňuch, J.2
Stacho, L.3
Zhao, X.4
-
8
-
-
0034812677
-
Inference of haplotypes from samples of diploid populations: Complexity and algorithms
-
Gusfield D. Inference of haplotypes from samples of diploid populations: Complexity and algorithms. Journal of Computational Biology 8 3 (2001) 305-323
-
(2001)
Journal of Computational Biology
, vol.8
, Issue.3
, pp. 305-323
-
-
Gusfield, D.1
-
10
-
-
33644509032
-
Haplotype inference by pure parsimony
-
in: Proc. 14th Annual Symposium on Combinatorial Pattern Matching, CPM'03
-
D. Gusfield, Haplotype inference by pure parsimony, in: Proc. 14th Annual Symposium on Combinatorial Pattern Matching, CPM'03, in: Springer LNCS, 2003, pp. 144-155
-
(2003)
Springer LNCS
, pp. 144-155
-
-
Gusfield, D.1
-
11
-
-
15344339638
-
Optimal, efficient reconstruction of root-unknown phylogenetic networks with constrained and structured recombination
-
Gusfield D. Optimal, efficient reconstruction of root-unknown phylogenetic networks with constrained and structured recombination. Journal of Computer and System Science 70 3 (2005) 381-398
-
(2005)
Journal of Computer and System Science
, vol.70
, Issue.3
, pp. 381-398
-
-
Gusfield, D.1
-
12
-
-
3242876395
-
Optimal, efficient reconstruction of phylogenetic networks with constrained recombination
-
Gusfield D., Eddhu S., and Langley C. Optimal, efficient reconstruction of phylogenetic networks with constrained recombination. Journal of Bioinformatics and Computational Biology 2 1 (2004) 173-213
-
(2004)
Journal of Bioinformatics and Computational Biology
, vol.2
, Issue.1
, pp. 173-213
-
-
Gusfield, D.1
Eddhu, S.2
Langley, C.3
-
13
-
-
33750258418
-
Haplotype inference
-
Handbook of Computational Molecular Biology, Chapman & Hall pp. 18-1-18-28
-
Gusfield D., and Orzack S.H. Haplotype inference. Handbook of Computational Molecular Biology. CRC Computer and Information Science Series (2005), Chapman & Hall pp. 18-1-18-28
-
(2005)
CRC Computer and Information Science Series
-
-
Gusfield, D.1
Orzack, S.H.2
-
14
-
-
0035958749
-
Genome research: Map of the human genome 3.0
-
Helmuth L. Genome research: Map of the human genome 3.0. Science 293 5530 (2001) 583-585
-
(2001)
Science
, vol.293
, Issue.5530
, pp. 583-585
-
-
Helmuth, L.1
-
15
-
-
1242341361
-
-
University of Trento
-
G. Lancia, C. Pinotti, R. Rizzi, Haplotyping populations: Complexity and approximations, Dit-02-082, University of Trento, 2002
-
(2002)
Haplotyping populations: Complexity and approximations, Dit-02-082
-
-
Lancia, G.1
Pinotti, C.2
Rizzi, R.3
-
16
-
-
0038285034
-
-
Mitra R.D., Butty V.L., Shendure J., Williams B.R., Housman D.E., and Church G.M. Digital Genotyping and Haplotyping with Polymerase Colonies. Proceedings of the National Academy of Sciences of the United States of America vol. 100 (2003) 5926-5931
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, pp. 5926-5931
-
-
Mitra, R.D.1
Butty, V.L.2
Shendure, J.3
Williams, B.R.4
Housman, D.E.5
Church, G.M.6
-
18
-
-
0035941029
-
Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21
-
Patil N., Berno A., Hinds D., Barrett W., Doshi J., Hacker C., Kautzer C., Lee D., Marjoribanks C., McDonough D., Nguyen B., Norris M., Sheehan J., Shen N., Stern D., Stokowski R., Thomas D., Trulson M., Vyas K., Frazer K., Fodor S., and Cox D. Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21. Science 294 5547 (2001) 1719-1723
-
(2001)
Science
, vol.294
, Issue.5547
, pp. 1719-1723
-
-
Patil, N.1
Berno, A.2
Hinds, D.3
Barrett, W.4
Doshi, J.5
Hacker, C.6
Kautzer, C.7
Lee, D.8
Marjoribanks, C.9
McDonough, D.10
Nguyen, B.11
Norris, M.12
Sheehan, J.13
Shen, N.14
Stern, D.15
Stokowski, R.16
Thomas, D.17
Trulson, M.18
Vyas, K.19
Frazer, K.20
Fodor, S.21
Cox, D.22
more..
-
19
-
-
33646723920
-
A concise necessary and sufficient condition for the existence of a galled-tree
-
Song Y.S. A concise necessary and sufficient condition for the existence of a galled-tree. IEEE/ACM Transaction on Computational Biology and Bioinformatics 3 2 (2006) 186-191
-
(2006)
IEEE/ACM Transaction on Computational Biology and Bioinformatics
, vol.3
, Issue.2
, pp. 186-191
-
-
Song, Y.S.1
-
20
-
-
33646165723
-
Algorithms for imperfect phylogeny haplotyping (IPPH) with a single homoplasy or recombination event
-
WABI. Casadio R., and Myers G. (Eds), Springer
-
Song Y.S., Wu Y., and Gusfield D. Algorithms for imperfect phylogeny haplotyping (IPPH) with a single homoplasy or recombination event. In: Casadio R., and Myers G. (Eds). WABI. Lecture Notes in Computer Science vol. 3692 (2005), Springer 152-164
-
(2005)
Lecture Notes in Computer Science
, vol.3692
, pp. 152-164
-
-
Song, Y.S.1
Wu, Y.2
Gusfield, D.3
-
21
-
-
0035071957
-
A new statistical method for haplotype reconstruction from population data
-
Stephens M., Smith N.J., and Donnelly P. A new statistical method for haplotype reconstruction from population data. American Journal of Human Genetics 68 4 (2001) 978-989
-
(2001)
American Journal of Human Genetics
, vol.68
, Issue.4
, pp. 978-989
-
-
Stephens, M.1
Smith, N.J.2
Donnelly, P.3
|