Molecular dynamics multidimensional scaling

Physics Letters, Section A: General, Atomic and Solid State Physics

Volumn 373, Issue 23-24, 2009, Pages 2001-2006

  Andrecut, M ^a  

^a UNIVERSITY OF CALGARY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

CLUSTERING ALGORITHMS; DATA VISUALIZATION; NUMERICAL METHODS; SIMULATED ANNEALING;

ENERGY FUNCTIONS; HIGH DIMENSIONAL DATA; MOLECULAR DYNAMICS METHODS; MULTI-DIMENSIONAL SCALING; MULTIDIMENSIONAL DATA; OPTIMAL ARRANGEMENT; SIMULATED ANNEALING METHOD; VISUAL REPRESENTATIONS;

MOLECULAR DYNAMICS;

EID: 67349162077     PISSN: 03759601     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.physleta.2009.04.007     Document Type: Article

References (15)

1. Flury B. A First Course In Multivariate Statistics (1997), Springer-Verlag, New York
2. Tenenbaum J.B., De Silva V., and Lanford J.C. Science 290 (2000) 2319
3. Cox T.F., and Cox M.A.A. Multidimensional Scaling (1994), Chapman & Hall, London
4. Borg I., and Groenen P. Modern Multidimensional Scaling (1997), Springer-Verlag, New York
5. Dzwinel W., and Basiak J. Future Gen. Comput. Syst. 15 (1999) 365
6. Haile J.M. Molecular Dynamics Simulation: Elementary Methods (2001), Wiley, New York
7. Rapaport D.C. The Art of Molecular Dynamics Simulation. second ed. (2004), Cambridge Univ. Press, Cambridge
8. Press W.H., Teukolsky S.A., Vetterling W.T., and Flannery B.P. Numerical Recipes in C. second ed. (1992), Cambridge Univ. Press, Cambridge
9. Reeves C.R. Genetic algorithms. In: Reeves C.R. (Ed). Modern Heuristic Techniques for Combinational Problems (1995), McGraw-Hill Book Company, Berkshire Chapter 4
10. Kirkpatrick S., Gelatt Jr. C.D., and Vecchi M.P. Science 220 (1983) 671
11. Winker P. Optimization Heuristics in Econometrics: Applications of Threshold Accepting (2000), Wiley, New York
12. Schlick T. Molecular Modeling Simulation (2002), Springer, New York
13. Swope W.C., Andersen H.C., Berens P.H., and Wilson K.R. J. Chem. Phys. 76 (1982) 637
14. Machine Learning Repository:. http://archive.ics.uci.edu/ml/
15. Su A.I., Wiltshire T., Batalov S., Lapp H., Ching K.A., Block D., Zhang J., Soden R., Hayakawa M., and Kreiman G. Proc. Natl. Acad. Sci. USA 101 16 (2004) 6062