Stress response proteins' differential expression in embryogenic and non-embryogenic callus of Vitis vinifera L. cv. Cabernet Sauvignon-A proteomic approach

Plant Science

Volumn 177, Issue 2, 2009, Pages 103-113

  Zhang, Jiangwei ^a   Ma, Huiqin ^a   Chen, Si ^a   Ji, Min ^a   Perl, Avihai ^b   Kovacs, Laszlo ^c   Chen, Shangwu ^a,d  

^a CHINA AGRICULTURAL UNIVERSITY   (China)

^b VOLCANI CENTER   (Israel)

^c MISSOURI STATE UNIVERSITY   (United States)

^d BEIJING UNIVERSITY OF POSTS AND TELECOMMUNICATIONS   (China)

Author keywords

Embryogenic callus; MALDI TOF MS; Proteomics; Stress response proteins; Vitis vinifera L

Indexed keywords

AGROBACTERIUM; RHIZOBIUM; VITACEAE; VITIS VINIFERA;

EID: 67349154762     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2009.04.003     Document Type: Article

References (62)

1. Vivier M.A., and Pretorius I.S. Genetically tailored grapevines for the wine industry. Trends Biotechnol. 20 (2002) 472-478
2. Perl A., Lotan O., Abu-Abied M., and Holland D. Establishment of an Agrobacterium-mediated transformation system for grape (Vitis vinifera L.): the role of antioxidants during grape-Agrobacterium interactions. Nat. Biotechnol. 14 (1996) 624-628
3. Li Z.T., Dhekney S.A., Dutt M., Zimmerman T.W., and Gray D.J. An improved protocol for Agrobacterium-mediated transformation of grapevine (Vitis vinifera L.). Plant Cell Tiss. Org. Cult. 93 (2008) 311-321
4. Hansen G. Evidence for Agrobacterium-induced apoptosis in maize cells. Mol. Plant Microbe. Interact. 13 (2000) 649-657
5. Imin N., De Jong F., Mathesius U., van Noorden G., Saeed N.A., Wang X.D., Rose R.J., and Rolfe B.G. Proteome reference maps of Medicago truncatula embryogenic cell cultures generated from single protoplasts. Proteomics 4 (2004) 1883-1896
6. Lippert D., Zhuang J., Ralph S., Ellis D.E., Gilbert M., Olafson R., Ritland K., Ellis B., Douglas C.J., and Bohlmann J. Proteome analysis of early somatic embryogenesis in Picea glauca. Proteomics 5 (2005) 461-473
7. Winkelmann T., Heintz D., Van Dorsselaer A., Serek M., and Braun H.P. Proteomic analyses of somatic and zygotic embryos of Cyclamen persicum Mill. reveal new insights into seed and germination physiology. Planta 224 (2006) 508-519
8. Maraschin S.F., de Priester W., Spaink H.P., and Wang M. Androgenic switch: an example of plant embryogenesis from the male gametophyte perspective. J. Exp. Bot. 56 (2005) 1711-1726
9. Yin L., Tao Y., Zhao K., Shao J., Li X., Liu G., Liu S., and Zhu L. Proteomic and transcriptomic analysis of rice mature seed-derived callus differentiation. Proteomics 7 (2007) 755-768
10. Marsoni M., Bracale M., Espen L., Prinsi B., Negri A.S., and Vannini C. Proteomic analysis of somatic embryogenesis in Vitis vinifera. Plant Cell Rep. 27 (2008) 347-356
11. Feher A., Pasternak T.P., and Dudits D. Transition of somatic plant cells to an embryogenic state. Plant Cell Tissue Organ Cult. 74 (2003) 201-228
12. Perl A., Saad S., Sahar N., and Holland D. Establishment of long-term embryogenic cultures of seedless Vitis vinifera cultivars-a synergistic effect of auxins and the role of abscisic acid. Plant Sci. 104 (1995) 193-200
13. Candiano G., Bruschi M., Musante L., Santucci L., Ghiggeri G.M., Carnemolla B., Orecchia P., Zardi L., and Righetti P.G. Blue silver: a very sensitive colloidal Coomassie G-250 staining for proteome analysis. Electrophoresis 25 (2004) 1327-1333
14. Zhang J., Ma H., Feng J., Zeng L., Wang Z., and Chen S. Grape berry plasma membrane proteome analysis and its differential expression during ripening. J. Exp. Bot. 59 (2008) 2979-2990
15. Prapagdee B., Vattanaviboon P., and Mongkolsuk S. The role of a bifunctional catalase-peroxidase KatA in protection of Agrobacterium tumefaciens from menadione toxicity. FEMS Microbiol. Lett. 232 (2004) 217-223
16. Mahmood T., Jan A., Kakishima M., and Komatsu S. Proteomic analysis of bacterial-blight defense-responsive proteins in rice leaf blades. Proteomics 6 (2006) 6053-6065
17. Kuta D.D., and Tripathi L. Agrobacterium-induced hypersensitive necrotic reaction in plant cells: a resistance response against Agrobacterium-mediated DNA transfer. Afr. J. Biotechnol. 4 (2005) 752-757
18. Barna B., Smigocki A.C., and Baker J.C. Transgenic production of cytokinin suppresses bacterially induced hypersensitive response symptoms and increases antioxidative enzyme levels in Nicotiana spp. Phytopathology 98 (2008) 1242-1247
19. Pasternak T.P., Prinsen E., Ayaydin F., Miskolczi P., Potters G., Asard H., Van Onckelen H.A., Dudits D., and Feher A. The Role of auxin, pH, and stress in the activation of embryogenic cell division in leaf protoplast-derived cells of alfalfa. Plant Physiol. 129 (2002) 1807-1819
20. Schmidt W. Iron solutions: acquisition strategies and signaling pathways in plants. Trends Plant Sci. 8 (2003) 188-193
21. Ishikawa T., and Shigeoka S. Recent advances in ascorbate biosynthesis and the physiological significance of ascorbate peroxidase in photosynthesizing organisms. Biosci. Biotechnol. Biochem. 72 (2008) 1143-1154
22. Wang X., He X., Lin J., Shao H., Chang Z., and Dixon R.A. Crystal structure of isoflavone reductase from alfalfa (Medicago sativa L.). J. Mol. Biol. 358 (2006) 1341-1352
23. Babiychuk E., Kushnir S., Belles-Boix E., Van Montagu M., and Inze D. Arabidopsis thaliana NADPH oxidoreductase homologs confer tolerance of yeasts toward the thiol-oxidizing drug diamide. J. Biol. Chem. 270 (1995) 26224-26231
24. Giribaldi M., Perugini I., Sauvage F.X., and Schubert A. Analysis of protein changes during grape berry ripening by 2-DE and MALDI-TOF. Proteomics 7 (2007) 3154-3170
25. Goremykin V.V., Salamini F., Velasco R., and Viola R. Mitochondrial DNA of vitis vinifera and the issue of rampant horizontal gene transfer. Mol. Biol. Evol. 26 (2009) 99-110
26. Kieffer P., Planchon S., Oufir M., Ziebel J., Dommes J., Hoffmann L., Hausman J.F., and Renaut J. Combining proteomics and metabolite analyses to unravel cadmium stress-response in poplar leaves. J. Proteome Res. 8 (2009) 400-417
27. Kim S.T., Yu S., Kang Y.H., Kim S.G., Kim J.Y., Kim S.H., and Kang K.Y. The rice pathogen-related protein 10 (JIOsPR10) is induced by abiotic and biotic stresses and exhibits ribonuclease activity. Plant Cell Rep. 27 (2008) 593-603
28. Mur L.A.J., Sturgess F.J., Farrell G.G., and Draper J. The AoPR10 promoter and certain endogenous PR10 genes respond to oxidative signals in Arabidopsis. Mol. Plant Physiol. 5 (2004) 435-451
29. Imin N., Nizamidin M., Daniher D., Nolan K.E., Rose R.J., and Rolfe B.G. Proteomic analysis of somatic embryogenesis in Medicago truncatula. Explant cultures grown under 6-benzylaminopurine and 1-naphthaleneacetic acid treatments. Plant Physiol. 137 (2005) 1250-1260
30. Luan S., Kudla J., Rodriguez-Concepcion M., Yalovsky S., and Gruissem W. Calmodulins and calcineurin B-like proteins: calcium sensors for specific signal response coupling in plants. Plant Cell 14 Suppl. (2002) S389-S400
31. Kudla J., Xu Q., Harter K., Gruissem W., and Luan S. Genes for calcineurin B-like proteins in Arabidopsis are differentially regulated by stress signals. Proc. Natl. Acad. Sci. U.S.A. 96 (1999) 4718-4723
32. Dixon R.A., Harrison M.J., and Lamb C.J. Early events in the activation of plant defense responses. Annu. Rev. Phytopathol. 32 (1994) 479-501
33. Dong J.Z., and Dunstan D.I. Endochitinase and beta-1,3-glucanase genes are developmentally regulated during somatic embryogenesis in Picea glauca. Planta 201 (1997) 189-194
34. Bagnoli F., Capuana M., and Racchi M.L. Developmental changes of catalase and superoxide dismutase isoenzymes in zygotic and somatic embryos of horse chestnut. Aust. J. Plant Physiol. 25 (1998) 909-913
35. Zhang Z., Henderson C., and Gurr S.J. Blumeria graminis secretes an extracellular catalase during infection of barley: potential role in suppression of host defence. Mol. Plant Pathol. 5 (2004) 537-547
36. Schuppler U., He P.H., John P.C.L., and Munns R. Effect of water stress on cell division and cell-division-cycle 2-like cell-cycle kinase activity in wheat leaves. Plant Physiol. 117 (1998) 667-678
37. Ötvos K., Pasternak T.P., Miskolczi P., Domoki M., Dorjgotov D., Szücs A., Bottka S., Dudits D., and Fehér A. Nitric oxide is required for, and promotes auxin-mediated activation of, cell division and embryogenic cell formation but does not influence cell cycle progression in alfalfa cell cultures. Plant J. 43 (2005) 849-860
38. Jaillon O., Aury J.M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J., Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.F., Weissenbach J., Quetier F., and Wincker P. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature 449 (2007) 463-467
39. Cassells A.C., and Curry R.F. Oxidative stress and physiological, epigenetic and genetic variability in plant tissue culture: implications for micropropagators and genetic engineers. Plant Cell Tiss. Org. Cult. 64 (2001) 145-157
40. Kitamiya E., Suzuki S., Sano T., and Nagata T. Isolation of two genes that were induced upon the initiation of somatic embryogenesis on carrot hypocotyls by high concentrations of 2,4-D. Plant Cell Rep. 19 (2000) 551-557
41. Bustos D.M., Bustamante C.A., and Iglesias A.A. Involvement of non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase in response to oxidative stress. J. Plant Physiol. 165 (2008) 456-461
42. Ogawa T., Yoshimura K., Miyake H., Ishikawa K., Ito D., Tanabe N., and Shigeoka S. Molecular characterization of organelle-type nudix hydrolases in Arabidopsis. Plant Physiol. 148 (2008) 1412-1424
43. Tesniere C., and Verries C. Molecular cloning and expression of cDNAs encoding alcohol dehydrogenases from Vitis vinifera L. during berry development. Plant Sci. 157 (2000) 77-88
44. 2. Mol. Biotechnol. 39 (2008) 49-56
45. Huber S.C., MacKintosh C., and Kaiser W.M. Metabolic enzymes as targets for 14-3-3 proteins. Plant Mol. Biol. 50 (2002) 1053-1063
46. Surabhi G.K., Reddy A.M., Jyothsnakumari G., and Sudhakar C. Modulation of key enzymes of nitrogen metabolism in two genotypes of mulberry (Morus alba L.) with differential sensitivity to salt stress. Environ. Exp. Bot. 64 (2008) 171-179
47. Kurepa J., and Smalle J.A. Structure, function and regulation of plant proteasomes. Biochimie 90 (2008) 324-335
48. Bonsager B.C., Finnie C., Roepstorff P., and Svensson B. Spatio-temporal changes in germination and radical elongation of barley seeds tracked by proteome analysis of dissected embryo, aleurone layer, and endosperm tissues. Proteomics 7 (2007) 4528-4540
49. Tsugeki R., Mori H., and Nishimura M. Purification, cDNA cloning and Northern-blot analysis of mitochondrial chaperonin 60 from pumpkin cotyledons. Eur. J. Biochem. 209 (1992) 453-458
50. Huang L.H., Wang H.S., and Le K. Different evolutionary lineages of large and small heat shock proteins in eukaryotes. Cell Res. 18 (2008) 1074-1076
51. Su P.H., and Li H.M. Arabidopsis stromal 70-kD heat shock. proteins are essential for plant development and important for thermotolerance of germinating seeds. Plant Physiol. 146 (2008) 1231-1241
52. Waters E.R., Lee G.J., and Vierling E. Evolution, structure and function of the small heat shock proteins in plants. J. Exp. Bot. 47 (2008) 325-338
53. Malerba M., Contran N., Tonelli M., Crosti P., and Cerana R. Role of nitric oxide in actin depolymerization and programmed cell death induced by fusicoccin in sycamore (Acer pseudoplatanus) cultured cells. Physiol. Plantarum 133 (2008) 449-457
54. Terrier N., Glissant D., Grimplet J., Barrieu F., Abbal P., Couture C., Ageorges A., Atanassova R., Léon C., Renaudin J.P., Dedaldechamp F., Romieu C., Delrot S., and Hamdi S. Isogene specific oligo arrays reveal multifaceted changes in gene expression during grape berry (Vitis vinifera L.) development. Planta 222 (2005) 832-847
55. He X.C., Qin Y.M., Xu Y., Hu C.Y., and Zhu Y.X. Molecular cloning, expression profiling, and yeast complementation of 19 β-tubulin cDNAs from developing cotton ovules. J. Exp. Bot. 59 (2008) 2687-2695
56. Kim Y.O., Kim J.S., and Kang H. Cold-inducible zinc finger-containing glycine-rich RNA-binding protein contributes to the enhancement of freezing tolerance in Arabidopsis thaliana. Plant J. 42 (2005) 890-900
57. Fujita T., Piuz I., and Schlegel W. Negative elongation factor NELF controls transcription of immediate early genes in a stimulus-specific manner. Exp. Cell Res. 315 (2009) 274-284
58. Shimada T., Fuji K., Tamura K., Kondo M., Nishimura M., and Hara-Nishimura I. Vacuolar sorting receptor for seed storage proteins in Arabidopsis thaliana. Proc. Natl. Acad. Sci. U.S.A. 100 (2003) 16095-16100
59. Sweetlove L.J., Heazlewood J.L., Herald V., Holtzapffel R., Day D.A., Leaver C.J., and Millar A.H. The impact of oxidative stress on Arabidopsis mitochondria. Plant J. 32 (2002) 891-904
60. Jiang Q., Chen H., Pan X., Pan Q., Shi Y., Li X., Zhang G., Wang Y., Xie S., and Shen S. Proteomic analysis of wheat (Triticum aestivum L.) hybrid necrosis. Plant Sci. 175 (2008) 394-401
61. DeLong A. Switching the flip: protein phosphatase roles in signaling pathways. Curr. Opin. Plant Biol. 9 (2006) 470-477
62. Renaut J., Hausman J., Bassett C., Artlip T., Cauchie H.M., Witters E., and Wisniewski M. Quantitative proteomic analysis of short photoperiod and low-temperature responses in bark tissues of peach (Prunus persica L. Batsch). Tree Genet. Genomes 4 (2008) 589-600