Continuous cultures of Pseudomonas putida mt-2 overcome catabolic function loss under real case operating conditions

Applied Microbiology and Biotechnology

Volumn 83, Issue 1, 2009, Pages 189-198

  Muñoz, Raúl ^a   Hernández, María ^a   Segura, Ana ^b   Gouveia, Joao ^a   Rojas, Antonia ^c   Ramos, Juan Luis ^b   Villaverde, Santiago ^a  

^a UNIVERSITY OF VALLADOLID   (Spain)

^b CSIC   (Spain)

^c CEEI Valencia Parque Tecnológico   (Spain)

Author keywords

Microbial damage; Plasmid pWW0; Process stability; Pseudomonas putida mt 2; Solvent tolerance; Toluene biodegradation

Indexed keywords

MICROBIAL DAMAGE; PLASMID PWW0; PROCESS STABILITY; PSEUDOMONAS PUTIDA MT-2; SOLVENT TOLERANCE; TOLUENE BIODEGRADATION;

BIOCHEMISTRY; BIODEGRADATION; CELL CULTURE; DEGRADATION; FULLERENES; MICROBIOLOGY; STRAIN; TOLUENE;

ORGANIC SOLVENTS;

TOLUENE;

BACTERIUM; BIODEGRADATION; BIOREACTOR; CATABOLISM; CHEMOSTAT; DILUTION; GENE EXPRESSION; MICROBIAL ACTIVITY; PLASMID; TOLUENE;

ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM CULTURE; BIOREACTOR; CHEMOSTAT; CONTINUOUS CULTURE; DILUTION; MICROBIAL DEGRADATION; NONHUMAN; PHENOTYPE; PSEUDOMONAS PUTIDA;

BIOMASS; BIOREACTORS; BIOTRANSFORMATION; CATECHOL 2,3-DIOXYGENASE; GENOMIC INSTABILITY; OXYGEN CONSUMPTION; PLASMIDS; PSEUDOMONAS PUTIDA; TOLUENE;

PSEUDOMONAS PUTIDA;

EID: 67349093282     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-009-1928-5     Document Type: Article

References (28)

1. MA Abril C Michán KN Timmis JL Ramos 1989 Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for degradation of aromatic hydrocarbons and expansion of the substrate range of the pathway J Bacteriol 171 6782 6790 (Pubitemid 20006965)
2. HL Birnboim J Doly 1979 A rapid alkaline extraction procedure for screening of recombinant plasmid DNA Nucleic Acids Res 7 1513 1523
3. U Brinkmann JL Ramos W Reinkee 1994 Loss of the Tol meta-cleavage pathway functions of Pseudomonas putida strain PaW1 (pWW0) during growth on toluene J Basic Microbiol 34 5 303 309 (Pubitemid 2157817)
4. S Bordel LF Diaz R Muñoz S Villaverde 2007 New insights on toluene biodegradation by Pseudomonas putida F1: Influence of pollutant concentration and excreted metabolites Appl Microbiol Biotechnol 74 857 866 (Pubitemid 46318662)
5. LF Díaz R Muñoz S Bordel S Villaverde 2008 Toluene biodegradation by Pseudomonas putida F1: targeting culture stability in long term operation Biodegradation 19 198 207
6. WA Duetz JG van Andel 1991 Stability of TOL plasmid pWW0 in Pseudomonas putida mt-2 under non-selective conditions in continuous culture J Gen Microbiol 137 1369 1374
7. S Harayama RA Leppik M Rekik N Mermod PR Lehrbach W Reineke KN Timmis 1986 Gene order of the TOL catabolic plasmid upper pathway operon and oxidation of both toluene and benzyl alcohol by the xylA product J Bacteriol 167 455 461 (Pubitemid 16049955)
8. Hernandez M, Gouveia J, Segura A, Muñoz R, Villaverde S (2008) Addressing the role of the extrusion pump-bearing pGRT1 plasmid on toluene biodegradation by Pseudomonas putida DOT-T1E under real case scenarios. Process Biochemistry (submitted for publication)
9. MB Leddy DW Phipps HF Ridgway 1995 Catabolite-mediated mutations in alternate toluene degradative pathways in Pseudomonas putida J Bacteriol 177 16 4713 4720
10. P Meulien RG Downing P Broda 1981 Excision of the 40 Kb segment of the TOL plasmid from Pseudomonas putida mt-2 involves direct repeats Mol Gen Genet 184 97 101 (Pubitemid 12212011)
11. G Mosqueda MI Ramos-Gonzalez JL Ramos 1999 Toluene metabolism by the solvent-tolerant Pseudomonas putida DOT-T1 strain, and its role in solvent impermeabilization Gene 232 69 76 (Pubitemid 29305319)
12. R Muñoz LF Díaz S Bordel S Villaverde 2008 Response of Pseudomonas putida F1 cultures to fluctuating toluene loads and operational failures in suspended growth bioreactors Biodegradation 19 897 9085
13. T Nakazawa T Yokota 1973 Benzoate metabolism in Pseudomonas putida (arvilla) mt-2: demonstration of two benzoate pathways J Bacteriol 115 262 275
14. JL Ramos S Marques K Timmis 1997 Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators Annu Rev Microbiol 51 341 372 (Pubitemid 27433053)
15. JL Ramos E Duque MT Gallegos P Godoy MI Ramos-Gonzalez A Rojas W Terán A Segura 2002 Mechanisms of solvent tolerance in gram-negative bacteria Annu Rev Microbiol 56 743 768 (Pubitemid 35217473)
16. Revah S, Morgan-Sagastume JM (2005) Methods for odor and VOC control. In: Shareefdeen Z, Singh A (eds) Biotechnology for odour and air pollution. Springer, Heidelberg, pp 29-64
17. A Segura E Duque G Mosqueda JL Ramos F Junker 1999 Multiple responses of Gram-negative bacteria to organic solvents Environ Microbiol 1 191 198 (Pubitemid 129640041)
18. A Segura A Rojas A Hurtado MJ Huertas JL Ramos 2003 Comparative genomic analysis of solvent extrusion pumps in Pseudomonas strains exhibiting different degrees of solvent tolerance Extremophiles 7 371 376 (Pubitemid 41512715)
19. Shareefdeen Z, Singh A (2005) Biotechnology for odour and air pollution. Springer, Heidelberg
20. J Sikkema JAM de Bont B Poolman 1995 Mechanisms of membrane toxicity of hydrocarbons Microbiol Rev 59 201 222
21. JH Song KA Kinney 2005 Microbial response and elimination capacity in biofilters subjected to high toluene loadings Appl Microbiol Biotechnol 68 554 559 (Pubitemid 41550000)
22. U.S. EPA (1994) Ranking of pollutants with respect to human health. Technical background document to support rulemaking pursuant to clean air. Act. section 112 (g). US Environment Protection Agency, Research Triangle Park, N.C.
23. JW van Groenestijn NJR Kraakman 2005 Recent developments in biological waste gas purification in Europe Chem Eng J 113 85 91 (Pubitemid 41501796)
24. S Villaverde MT Fernandez 1997 Non toluene-associated respiration in a Pseudomonas putida 54G biofilm grown on toluene in a flat-plate vapor-phase bioreactor Appl Microbiol Biotechnol 48 357 362 (Pubitemid 27430086)
25. S Villaverde RG Mirpuri Z Lewandowski WL Jones 1997 Physiological and chemical gradients in a Pseudomomas putida 54G biofilm degrading toluene in a flat plate vapor phase bioreactor Biotechnol Bioeng 56 361 371 (Pubitemid 27468932)
26. PA Williams K Murray 1974 Metabolism of benzoate and the methylbenzoates by Pseudomonas arvilla (arvilla) mt-2: evidence for the existence of a TOL plasmid J Bacteriol 120 416 423
27. PA Williams SD Taylor LE Gibb 1988 Loss of the toluene-xylene catabolic genes of TOL plasmid pWW0 during growth of Pseudomonas putida on benzoate is due to a selective growth advantage of "cured" segregants J Gen Microbiol 134 2039 2048 (Pubitemid 18194606)
28. M Zilli A Del Borghi A Converti 2000 Toluene removal vapor in a laboratory-scale biofilter Appl Microbiol Biotechnol 54 248 254 (Pubitemid 30662737)