Changes of microbial community structures and functional genes during biodegradation of phenolic compounds under high salt condition

Journal of Environmental Sciences

Volumn 21, Issue 6, 2009, Pages 821-826

  WANG, Ping ^a   QU, Yuanyuan ^a   ZHOU, Jiti ^a  

^a DALIAN UNIVERSITY OF TECHNOLOGY   (China)

Author keywords

amplified functional DNA restriction analysis; high salt; phenol hydroxylase; phenolic compounds; ribosomal intergenic spacer analysis

Indexed keywords

AMPLIFIED FUNCTIONAL DNA RESTRICTION ANALYSIS; HIGH SALT; PHENOL HYDROXYLASE; PHENOLIC COMPOUNDS; RIBOSOMAL INTERGENIC SPACER ANALYSIS;

BIOCHEMISTRY; BIODEGRADATION; BIOMASS; DEGRADATION; DNA; GENES; INFRARED SPECTROMETERS; MICROBIOLOGY; NUCLEIC ACIDS;

PHENOLS;

BACTERIAL DNA; CRESOL; INORGANIC SALT; MIXED FUNCTION OXIDASE; PHENOL 2-MONOOXYGENASE; PHENOL DERIVATIVE; PHENOL HYDROXYLASE; RIBOSOMAL SPACER DNA; RNA 16S;

BIODEGRADATION; COMMUNITY STRUCTURE; CONCENTRATION (COMPOSITION); DNA FINGERPRINTING; FUNCTIONAL GROUP; MICROBIAL COMMUNITY; PHENOL; RNA; SALT;

ARTICLE; BACTERIUM; BIOREMEDIATION; CHEMISTRY; DNA FINGERPRINTING; GENETIC VARIABILITY; GENETICS; METABOLISM; METHODOLOGY; MICROBIOLOGY; MULTIGENE FAMILY; SEWAGE; WATER MANAGEMENT;

BACTERIA; BIODEGRADATION, ENVIRONMENTAL; CRESOLS; DNA FINGERPRINTING; DNA, BACTERIAL; DNA, RIBOSOMAL SPACER; GENETIC VARIATION; MIXED FUNCTION OXYGENASES; MULTIGENE FAMILY; PHENOLS; RNA, RIBOSOMAL, 16S; SALTS; SEWAGE; WATER MICROBIOLOGY; WATER PURIFICATION;

ALCANIVORAX;

EID: 66949133186     PISSN: 10010742     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1001-0742(08)62347-5     Document Type: Article

References (29)

1. Ahme A.M. Phenol degradation by Pseudomonas seruginosa. Journal of Environmental Science and Health 30 1 (1995) 99-103
2. Alvare P.J.J., and Vogel T.M. Substrate interactions of benzene, toluene and p-xylene during microbial degradation by pure cultures and mixed cultures aquifer slurries. Applied and Environmental Microbiology 57 10 (1991) 2981-2985
3. Andrew D.E., Lenore S.C., and Arnold E.G. Standard Methods for the Examination of Water and Wastewater (1995), American Public Health Association, Washington, DC
4. Annadura G., Juan R.S., and Le D.J. Microbiological degradation of phenol using mixed liquors of Pseudomonas putida and activated sludge. Waste Management 22 7 (2002) 703-710
5. Arutchelvan V., Kanakasabai V., Nagarajan S., and Muralikrishnan V. Isolation and identification of novel high strength phenol degrading bacterial strains from phenolformaldehyde resin manufacturing industrial wastewater. Journal of Hazardous Materials 127 1-3 (2003) 238-243
6. Bielefeldt A., and Stensel H.D. Modeling competitive inhibition effects during biodegradation of BTEX mixtures. Water Research 33 3 (1999) 707-714
7. Bouchez T., Patureau D., Dabert P., Juretschko S., Dore J., Delqene P., et al. Ecological study of a bioaugmentation failure. Environmental Microbiology 2 2 (2000) 179-190
8. Brown V.M., Jordan D.H.M., and Tiller B.A. The effect of temperature on the acute toxicity of phenol to rainbow trout in hard water. Water Research 1 8-9 (1967) 587-597
9. Buchan A., Neidle E.L., and Moran M.A. Diversity of the ring-cleaving dioxygenase gene pcaH in a salt marsh bacterial community. Applied and Environmental Microbiology 67 12 (2001) 5801-5809
10. Cappello S., Denaro R., Genovese M., Giuliano L., and Yakimov M.M. Predominant growth of Alcanivorax during experiments on "oil spill bioremediation" in mesocosms. Microbiology Research 162 2 (2007) 185-190
11. Duarte G.F., Rosado A.S., Seldin L., Araujo W., and Elsas J.D. Analysis of bacterial community structure in sulfurousoil-containing soils and detection of species carrying dibenzothiophene desulfurization (dsz) genes. Applied and Environmental Microbiology 67 3 (2001) 1052-1062
12. Enwall K., Philippot L., and Hallin S. Activity and composition of the denitrifying bacterial community respond differently to long-term fertilization. Applied and Environmental Microbiology 71 12 (2005) 8335-8343
13. Evans W.C. Oxidation of phenol and benzoic acid by some soil bacteria. Journal of Biological Chemistry 41 3 (1947) 373-382
14. Futamata H., Harayama S., Hiraishi A., and Watanabe K. Functional and structural analyses of trichloroethylenedegrading bacterial communities under different phenolfeeding conditions: laboratory experiments. Applied Microbiology and Biotechnology 60 5 (2003) 594-600
15. Jiang H.L., Tay J.H., Maszenan A.M., and Tay S.T.L. Bacterial diversity and function of aerobic granules engineered in a sequencing batch reactor for phenol degradation. Applied and Environmental Microbiology 70 11 (2004) 6767-6775
16. Jiang Y., Wen J., Bai J., Jia X.Q., and Hu Z.D. Biodegradation of phenol at high initial concentration by Alcaligenes faecalis. Journal of Hazardous Materials 147 1-2 (2007) 672-676
17. Kar S., Swaminathan T., and Baradarajan A. Biodegradation of phenol and cresol isomer mixtures by Arthrobacter. World Journal of Microbiology and Biotechnology 13 6 (1997) 659-663
18. Klecka G.M., and Maier W.J. Kinetics of microbial growth on mixtures of pentachlorophenol and chlorinated aromatic compounds. Biotechnology and Bioengineering 31 4 (1988) 328-335
19. Liu C., and Shao Z. Alcanivorax dieselolei sp. nov., a novel alkane-degrading bacterium isolated from sea water and deep-sea sediment. International Journal of Systematic and Evolutionary Microbiology 55 3 (2005) 1181-1186
20. Meyer J.S., Marcus M.D., and Bergman H.L. Inhibitory interactions of aromatic organics during microbial degradation. Environmental Toxicology and Chemistry 3 4 (1984) 583-587
21. Mufiel B., Wafa A., Vincent U., and Thierry H. DNA extraction from activated sludges. Current Microbiology 38 6 (1999) 315-319
22. Perron N., and Welander U. Degradation of phenol and cresols at low temperatures using a suspended-carrier biofim process. Chemosphere 55 1 (2004) 45-50
23. Reardon K.F., and Mosteller D.C. Biodegradation kinetics of benzene, toluene, and phenol as single and mixed substrates for Pseudomonas putida F1. Biotechnology and Bioengineering 69 4 (2000) 385-400
24. Sambrook J., Fritsch E.F., and Maniatis T. Molecular Cloning: A Laboratory Manual (1989), Cold Spring Harbor Laboratory Press, NY
25. Schi P.M., and Youn L.Y. Biodegradation of phenol: mechanisms and applications. Bioremediation Journal 4 1 (2000) 1-18
26. Torsvik V., and Ovreas L. Microbial diversity and function in soil: from genes to ecosystems. Current Opinion in Microbiology 5 3 (2002) 240-245
27. Watanabe K., Teramoto M., Futamata H., and Harayama S. Molecular detection, isolation, and physiological characterization of functionally dominant phenol-degrading bacteria in activated sludge. Applied and Environmental Microbiology 64 11 (1998) 4396-4402
28. Widada J., Nojiri H., and Omori T. Recent developments in molecular techniques for identification and monitoring of xenobiotic-degrading bacterial and their catabolic genes in bioremediation. Applied Microbiology and Biotechnology 60 1-2 (2002) 45-59
29. Yu Y.G., and Loh K.C. Inhibition of p-cresol on aerobic biodegradation of carbazole and sodium salicylate by Pseudomonas putida. Water Research 36 7 (2002) 1794-1802