Multiple sequence alignment based on dynamic programming using FPGA

IEICE Transactions on Information and Systems

Volumn E90-D, Issue 12, 2007, Pages 1939-1946

  Masuno, Shingo ^a   Maruyama, Tsutomu ^a   Yamaguchi, Yoshiki ^a   Konagaya, Akihiko ^b  

^a UNIVERSITY OF TSUKUBA   (Japan)

^b RIKEN   (Japan)

Author keywords

Dynamic programming; FPGA; Multiple sequence alignment; Reconfiguration

Indexed keywords

COMPUTER HARDWARE; COMPUTER PROGRAMMING; COMPUTER SYSTEMS PROGRAMMING; FIELD PROGRAMMABLE GATE ARRAYS (FPGA); HARDWARE; RECONFIGURABLE HARDWARE;

COMMON ARCHITECTURE; COMPUTATIONAL BIOLOGY; HARDWARE RESOURCES; MULTIDIMENSIONAL SEARCH; MULTIPLE SEQUENCE ALIGNMENTS; RECONFIGURATION; SEQUENCE DATABASE; THREE-DIMENSIONAL ALIGNMENTS;

DYNAMIC PROGRAMMING;

EID: 66749100074     PISSN: 09168532     EISSN: 17451361     Source Type: Journal    
DOI: 10.1093/ietisy/e90-d.12.1939     Document Type: Article

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