Disease classification with hippocampal shape invariants

Hippocampus

Volumn 19, Issue 6, 2009, Pages 572-578

  Gutman, Boris ^a,c   Wang, Yalin ^a,b   Morra, Jonathan ^a   Toga, Arthur W ^a   Thompson, Paul M ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c NONE   (United States)

Author keywords

Alzheimer disease; Global shape description; Spherical harmonics; Spherical parameterization; Support vector machines

Indexed keywords

ALZHEIMER DISEASE; ARTICLE; BRAIN MAPPING; BRAIN SIZE; CLINICAL ARTICLE; CONTROLLED STUDY; DISEASE CLASSIFICATION; HIPPOCAMPUS; HUMAN; IMAGE PROCESSING; NUCLEAR MAGNETIC RESONANCE IMAGING; PRIORITY JOURNAL; SENSITIVITY AND SPECIFICITY; SUPPORT VECTOR MACHINE;

AGED; ALZHEIMER DISEASE; DATABASES, FACTUAL; FEMALE; HIPPOCAMPUS; HUMANS; IMAGING, THREE-DIMENSIONAL; MAGNETIC RESONANCE IMAGING; MALE; MODELS, ANATOMIC; NEUROPSYCHOLOGICAL TESTS; ORGAN SIZE; REGRESSION ANALYSIS; ROC CURVE; SENSITIVITY AND SPECIFICITY;

EID: 66249084849     PISSN: 10509631     EISSN: 10981063     Source Type: Journal    
DOI: 10.1002/hipo.20627     Document Type: Article

References (28)

1. Brechbühler C, Gerig G, Kübler O. 1995. Parametrization of closed surfaces for 3-D shape description. Comput Vis Image Understanding 61:154-170.
2. Chupin M, Cuingnet R, Lemieux L, Lehéricy S, Benali H, Garnero L, Colliot O, the Alzheimer's Disease Neuroimaging Initiative. 2008. Fully automatic hippocampus segmentation discriminates between Alzheimer's Disease and Normal Aging - Data from the ADNI Database. MICCAI 2008 Workshop on Computational Anatomy and Physiology of the Hippocampus (CAPH'08):35-45.
3. Cortes C, Vapnik V. 1995. Support-vector networks. Mach Learn 20:273-297.
4. Davies RH, Twining CJ, Allen PD, Cootes TF, Taylor CJ. 2003. Shape discrimination in the hippocampus using an MDL model. In: Proceedings of IPMI, LNCS, Vol.2732, pp 38-50.
5. Garland M, Heckbert PS. 1997. Surface simplification using quadric error metrics. In: Proceedings of SIGGRAPH, pp 209-216.
6. Gorczowski K, Styner M, Jeong JY, Marron JS, Piven J, Hazlett HC, Pizer SM, Gerig G. 2007. Statistical shape analysis of multi-object complexes. In: Proceedings of CVPR, pp 1-8. (Pubitemid 47530136)
7. Gu X, Wang Y, Chan TF, Thompson TF, Yau ST. 2004. Genus zero surface conformal mapping and its application to brain surface mapping. IEEE Trans Med Imaging 23:949-958.
8. Gutman B, Wang Y, Lui LM, Chan TF, Thompson PM. 2007. Hippocampal surface discrimination via invariant descriptors of spherical conformals maps. In: Proceedings of ISBI, pp 1316-1319. (Pubitemid 350141339)
9. Gutman B, Wang Y, Lui LM, Chan TF, Thompson PM, Toga AW. 2008a. Shape registration with spherical cross correlation. MICCAI 2008 Workshop on Mathematical Foundations in Computational Anatomy (MFCA '08).
10. Gutman B, Wang Y, Lui LM, Chan TF, Toga AW, Thompson PM. 2008b. Disease classification with hippocampal shape invariants. MICCAI 2008 Workshop on Computational Anatomy and Physiology of the Hippocampus (CAPH '08):76-86.
11. Guyon I, Elisseef A. 2003. An introduction to variable and feature selection. J Mach Learn Res 3:1157-1182.
12. Han X, Xu C, Prince JL. 2003. A topology preserving level set method for geometric deformable models. IEEE Trans Pattern Anal Mach Intell 25:755-768.
13. Healy D, Rockmore D, Moore SB. 1996. Ffts for the 2-sphere-improvements and variations. J Fourier Anal Applicat 9:341-385. (Pubitemid 37230261)
14. Joachims T. 2006. Training linear SVMs in linear time. In: Proceedings of KDD, pp 217-226. (Pubitemid 44535518)
15. Kazhdan MM, Funkhouser TA, Rusinkiewicz S. 2003. Rotation invariant spherical harmonic representation of 3D shape descriptors. In: Proceedings of the Symposium on Geometry, ACM International Conference Proceedings Series 43, pp 156-165.
16. Kim JS, Kim YG, Choi SM, Kim MH. 2005. Morphometry of the Hippocampus based on a deformable model and support vector machines. In: Proceedings of AIME, pp 353-362.
17. Kloppel S, Stonnington CM, Chu C, Draganski B, Scahill RI, Rohrer JD, Fox NC, Jack CR, Ashburner J, Frackowiak RS. 2008. Automatic classification of MR scans in Alzheimer's Disease. Brain 131:681-689.
18. Li S, Shi F, Pu F, Li X, Jiang T, Xie S, Wang Y. 2007. Hippocampal shape analysis of Alzheimer disease based on machine learning methods. Am J Neuroradiol 28:1339-1345. (Pubitemid 47309669)
19. Morra JH, Tu Z, Apostolova LG, Green AE, Toga AW, Thompson PM. 2008. Automatic subcortical segmentation using a contextual model. In: Proceedings of MICCAI, LNCS, Vol.5241, pp 194-201.
20. Niethammer M, Reuter M, Wolter FE, Bouix S, Peinecke N, Koo MS, Shenton ME. 2007. Global medical shape analysis using the Laplace-Beltrami spectrum. MICCAI 1:850-857.
21. Silverman D, Thompson P. 2006. Structural and functional neuroimaging: Focusing on mild cognitive impairment. Appl Neurol 2:10-22.
22. Shen L, Ford J, Makedon F, Wang Y, Steinberg T, Ye S, Saykin AJ. 2003. Morphometric analysis of brain structures for improved discrimination. MICCAI 2:513-520. (Pubitemid 37476900)
23. Shenton M, Gerig G McCarley RW, Szekely G, Kikinis R. 2002. Amygdala-hippocampal shape differences in schizophrenia: The Application of 3D shape models to volumetric mr data. Psychiatry Res: Neuroimaging 115:15-35.
24. Styner MA, Gerig G. 2001. Three-dimensional medial shape representation incorporating object variability. CVPR 2:651-656. (Pubitemid 34096776)
25. Thompson PM, Hayashi KM, Zubicaray GI, Janke AL, Rose SE, Semple J, Hong MS, Herman DH, Gravano D, Doddrell DM, Toga AW. 2004. Mapping hippocampal and ventricular change in Alzheimer disease. Neuroimage 22:1754-1766. (Pubitemid 38962663)
26. Vemuri P, Gunter JL, Senjem ML, Whitwell JL, Kantarci K, Knopman DS, Boeve BF, Petersen RC, Jack CR. 2008. Alzheimer's Disease diagnosis in individual subjects using structural MR images: Validation studies. Neuroimage 39:1186-1197.
27. Wang L, Swank JS, Glick IE, Gado MH, Miller MI, Morris JC, Csernansky JG. 2003. Changes in hippocampal volume and shape across time distinguish dementia of the Alzheimer Type from healthy aging. Neuroimage 20:667-682. (Pubitemid 37268096)
28. Yushkevich PA, Zhang H, Gee JC. 2006. Continuous medial representation for anatomical structures. IEEE Trans Med Imaging 25 12:1547-1564. (Pubitemid 44936705)