Mass spectrometry-based structural dissection of fluorescent proteins

Biochemistry

Volumn 48, Issue 18, 2009, Pages 3810-3812

  Alvarez, Luis A ^a   Merola, Fabienne ^a   Erard, Marie ^a   Rusconi, Filippo ^b  

^a UNIVERSITÉ PARIS SUD   (France)

^b MUSÉUM NATIONAL D'HISTOIRE NATURELLE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOPEPTIDE; ENDOPROTEOLYSIS; FLUORESCENT PROTEIN; HIGH RESOLUTION; LIVE CELL; MOLECULAR BASIS; PEPTIDE MASS FINGERPRINT; PHOTOPRODUCTS; PROTEIN STRUCTURES;

AMINES; FLUORESCENCE MICROSCOPY; MASS SPECTROMETERS; MASS SPECTROMETRY; PHOTOBLEACHING; PROTEINS; SPECTRUM ANALYSIS;

FLUORESCENCE;

CYAN FLUORESCENT PROTEIN;

ARTICLE; MASS SPECTROMETRY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN DEGRADATION; PROTEIN STRUCTURE;

AMINO ACID SEQUENCE; FLUORESCENCE; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 66149109595     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi900327f     Document Type: Article

References (25)

1. Chalfie, M., Tu, Y., Euskirchen, G., Ward, W. W., and Prasher, D. C. (1994) Science 263, 802-805.
2. Shaner, N. C., Patterson, G. H., and Davidson, M. W. (2007) J. Cell Sci. 120, 4247-4260.
3. Remington, S. J. (2006) Curr. Opin. Struct. Biol. 16, 714-721.
4. Terskikh, A., Fradkov, A., Ermakova, G., Zaraisky, A., Tan, P., Kajava, A. V., Zhao, X. N., Lukyanov, S., Matz, M., Kim, S., Weissman, I., and Siebert, P. (2000) Science 290, 1585-1588.
5. Patterson, G. H., and Lippincott-Schwartz, J. (2002) Science 297, 1873-1877.
6. Demarco, I. A., Periasamy, A., Booker, C. F., and Day, R. N. (2006) Nat. Methods 3, 519-524.
7. Fernandez-Suarez, M., and Ting, A. Y. (2008) Nat. Rev. Mol. Cell Biol. 9, 929-943.
8. Kirber, M. T., Chen, K., and Keaney, J. F. (2007) Nat. Methods 4, 767-768.
9. Sinnecker, D., Voigt, P., Hellwig, N., and Schaefer, M. (2005) Biochemistry 44, 7085-7094.
10. van Thor, J. J., Gensch, T., Hellingwerf, K. J., and Johnson, L. N. (2002) Nat. Struct. Biol. 9, 37-41.
11. Shu, X. K., Shaner, N. C., Yarbrough, C. A., Tsien, R. Y., and Remington, S. J. (2006) Biochemistry 45, 9639-9647.
12. Barondeau, D. P., Kassmann, C. J., Tainer, J. A., and Getzoff, E. D. (2007) J. Am. Chem. Soc. 129, 3118-3126.
13. Barondeau, D. P., Kassmann, C. J., Tainer, J. A., and Getzoff, E. D. (2006) J. Am. Chem. Soc. 128, 4685-4693.
14. Adam, V., Lelimousin, M., Boehme, S., Desfonds, G., Nienhaus, K., Field, M. J., Wiedenmann, J., McSweeney, S., Nienhaus, G. U., and Bourgeois, D. (2008) Proc. Natl. Acad. Sci. U.S.A. 105 18343-18348.
15. Chiang, C. F., Okou, D. T., Griffin, T. B., Verret, C. R., and Williams, M. N. V. (2001) Arch. Biochem. Biophys. 394, 229-235.
16. Pouwels, L. J., Zhang, L. P., Chan, N. H., Dorrestein, P. C., and Wachter, R. M. (2008) Biochemistry 47, 10111-10122.
17. Gross, L. A., Baird, G. S., Hoffman, R. C., Baldridge, K. K., and Tsien, R. Y. (2000) Proc. Natl. Acad. Sci. U.S.A. 97, 11990-11995.
18. Pakhomov, A. A., Pletneva, N. V., Balashova, T. A., and Martynov, V. I. (2006) Biochemistry 45, 7256-7264.
19. Tretyakova, Y. A., Pakhomov, A. A., and Martynov, V. I. (2007) J. Am. Chem. Soc. 129, 7748-7749.
20. Houée Levin, C., and Sicard Roselli, C. (2001) in Radiation chemistry of proteins, pp 553-584, Elsevier, Amsterdam..
21. Blouquit, Y., Duchambon, P., Brun, E., Marco, S., Rusconi, F., and Sicard-Roselli, C. (2007) Free Radical Biol. Med. 43, 216-228.
22. Mozziconacci, O., Mirkowski, J., Rusconi, F., Pernot, P., Bobrowski, K., and Houee-Levin, C. (2007) Free Radical Biol. Med. 43, 229-240.
23. Lippincott, J., and Apostol, I. (1999) Anal. Biochem. 267, 57-64.
24. Bae, J. H., Rubini, M., Jung, G., Wiegand, G., Seifert, M. H. J., Azim, M. K., Kim, J. S., Zumbusch, A., Holak, T. A., Moroder, L., Huber, R., and Budisa, N. (2003) J. Mol. Biol. 328, 1071-1081.
25. Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., and Ferrin, T. E. (2004) J. Comput. Chem. 25, 1605-1612.