Chromosomal and Ti plasmid characterization of tumorigenic strains of three agrobacterium species isolated from grapevine tumours

Plant Pathology

Volumn 58, Issue 3, 2009, Pages 584-593

  Palacio Bielsa, A ^a   Gonzalez Abolafio R ^b   Alvarez B ^b   Lastra, B ^c   Cambra, M A ^d   Salcedo, C I ^b   Lopez M M ^b   Penyalver, R ^b  

^a Instituto Agroalimentario de Aragón IA2   (Spain)

^b INSTITUTO VALENCIANO DE INVESTIGACIONES AGRARIAS IVIA   (Spain)

^c UNIVERSITY OF SANTIAGO DE COMPOSTELA   (Spain)

^d Centro de Protección Vegetal CPV   (Spain)

Author keywords

16S rRNA gene sequencing; Biovars; Crown gall; Opines; PCR; Vitis vinifera

Indexed keywords

BACTERIUM; CHROMOSOME; FRUIT; PATHOGENICITY; PLASMID; POLYMERASE CHAIN REACTION; RNA; TUMOR; VINE;

AGROBACTERIUM; AGROBACTERIUM RHIZOGENES; AGROBACTERIUM TUMEFACIENS; AGROBACTERIUM VITIS; LYCOPERSICON ESCULENTUM; NICOTIANA OBTUSIFOLIA; NICOTIANA TABACUM; RHIZOBIUM; VIRUSES; VITACEAE; VITIS; VITIS VINIFERA;

EID: 65649133576     PISSN: 00320862     EISSN: 13653059     Source Type: Journal    
DOI: 10.1111/j.1365-3059.2008.01984.x     Document Type: Article

References (42)

1. Anonymous, 1993. Journal Officiel des Communautés Européenes. No. L 250/4-8 (7/10/93).
2. Argun N, Momol MT, Maden S et al., 2002. Characterization of Agrobacterium vitis strains isolated from Turkish grape cultivars in the Central Anatolia region. Plant Disease 86, 162 6. (Pubitemid 34115415)
3. Burr TJ, Bazzi C, Süle S, Otten L, 1998. Crown gall of grape: biology of Agrobacterium vitis and the development of disease control strategies. Plant Disease 82, 1288 97. (Pubitemid 28548129)
4. Burr TJ, Otten L, 1999. Crown gall of grape: biology and disease management. Annual Review of Phytopathology 37, 53 80. (Pubitemid 29523929)
5. Cangelosi GA, Best EA, Martinetti G, Nester EW, 1992. Methods for genetic analysis of Agrobacterium. Methods in Enzymology 204, 384 97.
6. Cubero J, López MM, 2001. An efficient microtitre system to determine Agrobacterium biovar. European Journal of Plant Pathology 107, 757 60. (Pubitemid 33028106)
7. Cubero J, Martínez MC, Llop P, López MM, 1999. A simple and efficient PCR method for the detection of Agrobacterium tumefaciens in plant tumours. Journal of Applied Microbiology 86, 591 602. (Pubitemid 29180533)
8. Dessaux Y, Petit A, Farrand SK, Murphy MP, 1998. Opine and opine-like molecules involved in plant-Rhizobiae interactions. In : Spaink HP, Kondorosi A, Hooykans P, eds. The Rhizobiaceae. Dordrecht, the Netherlands : Kluwer Academic Publishers, 173 97.
9. Eastwell JC, Willis LG, Cavileer TD, 1995. A rapid and sensitive method to detect Agrobacterium vitis by polymerase chain reaction. Plant Disease 79, 822 7.
10. Gallie DR, Zaitlin D, Perry KL, Kado CI, 1984. Characterization of the replication and stability regions of Agrobacterium tumefaciens plasmid pTAR. Journal of Bacteriology 157, 739 45. (Pubitemid 14151552)
11. Haas JH, Zueibil A, Zutra D, Tanne E, Manulis S, 1991. The presence of crown gall of grape incitated by Agrobacterium tumefaciens biovar 3 in Israel. Phytoparasitica 19, 311 8.
12. Keane PJ, Kerr A, New PB, 1970. Crown gall of stone fruit. II. Identification and nomenclature of Agrobacterium isolates. Australian Journal of Biological Sciences 23, 151 3.
13. Knauf VC, Panagopoulos CG, Nester EW, 1983. Comparison of the Ti plasmid from three different biotypes of Agrobacterium tumefaciens isolated from grapevines. Journal of Bacteriology 153, 1535 42.
14. Lastra B, 1998. Agrobacterium spp. en Cultivares de Vid de Galicia: Distribución, Caracterización de Cepas Bacterianas y Sensibilidad de Cultivares y Portainjertos. Santiago de Compostela, Spain : University of Santiago de Compostela, PhD thesis.
15. López MM, 2004. Tumores de la vid (Agrobacterium spp. (Smith y Townsend) (Conn). In : Los Parásitos de la Vid. Estrategias de Protección Razonada. Madrid, Spain : Ministerio de Agricultura, Pesca y Alimentación: Mundi-Prensa Editions, 245 7.
16. López MM, Bertolini E, Olmos A et al., 2003. Innovative tools for detection of plant pathogenic viruses and bacteria. International Microbiology 6, 233 43. (Pubitemid 37524235)
17. López MM, Gorris MT, Montojo AM, 1988. Opine utilization by Spanish isolates of Agrobacterium tumefaciens. Plant Pathology 37, 565 72.
18. Ma D, Yanofsky MF, Gordon MP, Nester EW, 1987. Characterization of Agrobacterium tumefaciens isolates from grapevine tumors in China. Applied and Environmental Microbiology 53, 1338 43.
19. Martínez-Murcia AJ, Antón AI, Rodríguez-Valera F, 1999. Patterns of sequence variation in two regions of the 16S rRNA multigene family of Escherichia coli. International Journal of Systematic Bacteriology 49, 601 10. (Pubitemid 29222349)
20. Mohammadi M, Fatehi-Paykani R, 1999. Phenotypical characterization of Iranian isolates of Agrobacterium vitis, the causal agent of crown gall disease of grapevine. Vitis 38, 115 21. (Pubitemid 29490130)
21. Moore LW, Kado CL, Bouzar H, 1988. Agrobacterium. In : Schaad NW, ed. Laboratory Guide for Identification of Plant Pathogenic Bacteria. St Paul, MN, USA : APS Press, 16 36.
22. Nesme X, Leclerc MC, Bardin R, 1989. PCR detection of an original endosymbiont: the Ti plasmid of Agrobacterium tumefaciens. In : Nardon P, Gianinazzi-Peason V, Greines AM, Margullis L, Smith C, eds. Endocitobiology, IV edn. Paris, France : INRA, 47 50.
23. New PB, Kerr A, 1971. A selective medium for Agrobacterium radiobacter biotype 2. Journal of Applied Bacteriology 34, 233 6.
24. Ophel K, Kerr A, 1990. Agrobacterium vitis sp. nov. for strains of Agrobacterium biovar 3 from grapevines. International Journal of Systematic Bacteriology 40, 236 41. (Pubitemid 20216931)
25. Otten L, Crouzet P, Salomone JY, de Ruffray P, Szegedi E, 1995. Agrobacterium vitis strain AB3 harbors two independent tartrate utilization systems, one of which is encoded by the Ti plasmid. Molecular Plant-Microbe Interactions 8, 138 46.
26. Otten L, de Ruffray P, de Lajudie P, Michot B, 1996a. Sequence characterization of a ribosomal RNA operon from Agrobacterium vitis. Molecular and General Genetics 251, 99 107. (Pubitemid 26146135)
27. Otten L, de Ruffray P, Momol EA, Momol MT, Burr TJ, 1996b. Phylogenetic relationship between Agrobacterium vitis isolates and their Ti plasmids. Molecular Plant-Microbe Interactions 9, 782 6. (Pubitemid 27015800)
28. Panagopoulos CG, Psallidas PG, Alivizatos AS, 1978. Studies on biotype 3 of Agrobacterium radiobacter var. tumefaciens. In : Proceedings of the Fourth Conference on Plant Pathogenic Bacteria. Angers, France 221 8.
29. Paulus F, Huss B, Bonnard G et al., 1989. Molecular systematics of biotype III of Ti plasmids of Agrobacterium tumefaciens. Molecular Plant-Microbe Interactions 2, 64 74.
30. Portier P, Fischer-Le Saux M, Mougel C et al., 2006. Identification of genomic species in Agrobacterium biovar 1 by AFLP genomic markers. Applied and Environmental Microbiology 72, 7123 31.
31. Ridé M, Ridé S, Petit A, Bollet C, Dessaux Y, Gardan L, 2000. Characterization of plasmid-borne and chromosome-encoded traits of Agrobacterium biovar 1, 2 and 3 strains from France. Applied and Environmental Microbiology 66, 1818 25.
32. Roy MA, Sasser M, 1983. A medium selective for Agrobacterium tumefaciens biotype 3. Phytopathology 73, 810.
33. Salomone JY, Szegedi E, Cobanov P, Otten L, 1998. Tartrate utilization genes promote growth of Agrobacterium spp. on grapevine. Molecular Plant-Microbe Interactions 11, 836 8. (Pubitemid 28338717)
34. Sawada H, Ieki H, Masuda I, 1995. PCR detection of Ti and Ri plasmids from phytopathogenic Agrobacterium strains. Applied and Environmental Microbiology 61, 828 31.
35. Sawada H, Ieki H, Oyaizu H, Masuda I, 1993. Proposal for rejection of Agrobacterium tumefaciens and revised descriptions for the genus Agrobacterium and for Agrobacterium radiobacter and Agrobacterium rhizogenes. International Journal of Systematic Bacteriology 43, 694 702. (Pubitemid 23299822)
36. Schroth MN, Thompson JP, Hildebrand DC, 1965. Isolation of Agrobacterium tumefaciens-Agrobacterium radiobacter group from soil. Phytopathology 55, 645 7.
37. Süle S, 1978. Biotypes of Agrobacterium tumefaciens in Hungary. Journal of Applied Bacteriology 44, 207 13. (Pubitemid 8302990)
38. Szegedi E, Bottka S, 2002. Detection of Agrobacterium vitis by polymerase chain reaction in grapevine bleeding sap after isolation on a semiselective medium. Vitis 41, 37 42. (Pubitemid 34299721)
39. Szegedi E, Bottka S, Mikulás J, Otten L, Sule S, 2005. Characterization of Agrobacterium tumefaciens strains isolated from grapevine. Vitis 44, 49 54. (Pubitemid 40554669)
40. Szegedi E, Otten L, Czakó M, 1992. Diverse types of tartrate plasmids in Agrobacterium tumefaciens biotype III strains. Molecular Plant-Microbe Interactions 5, 435 8.
41. Zhu J, Oger PM, Schrammeijer B, Hooykaas PJJ, Farrand SK, Winans SC, 2000. The bases of crown gall tumorigenesis. Journal of Bacteriology 182, 3885 95. (Pubitemid 30436546)
42. Zupan J, Muth TR, Draper O, Zambryski P, 2000. The transfer of DNA from Agrobacterium tumefaciens into plants: a feast of fundamental insights. The Plant Journal 23, 11 28. (Pubitemid 30597778)