A method for assessment of Helicobacter pylori genotype using stool specimens

FEMS Immunology and Medical Microbiology

Volumn 56, Issue 1, 2009, Pages 63-66

  Hirai, Itaru ^a,b   Sasaki, Tadahiro ^a   Fujimoto, Saori ^a   Moriyama, Toshiki ^c   Azuma, Takeshi ^b   Yamamoto, Yoshimasa ^a,b  

^a OSAKA UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

^b KOBE UNIVERSITY SCHOOL OF MEDICINE   (Japan)

^c OSAKA UNIVERSITY   (Japan)

Author keywords

Healthy individual; Helicobacter pylori; Noninvasive genotyping; Stool specimen; Virulence factor

Indexed keywords

BACTERIAL DNA; RNA 16S; VIRULENCE FACTOR;

ADULT; ANTIGEN DETECTION; ARTICLE; ASIAN; BACTERIAL GENE; BACTERIUM DETECTION; CHROMATOGRAPHY; DNA EXTRACTION; FECES ANALYSIS; GENOTYPE; HELICOBACTER INFECTION; HELICOBACTER PYLORI; HUMAN; JAPANESE; MAJOR CLINICAL STUDY; MOLECULAR EPIDEMIOLOGY; NON INVASIVE PROCEDURE; PREDICTION; PREVALENCE; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION;

ADULT; ANTIGENS, BACTERIAL; BACTERIAL PROTEINS; DNA, BACTERIAL; FECES; HELICOBACTER INFECTIONS; HELICOBACTER PYLORI; HUMANS; MIDDLE AGED; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SENSITIVITY AND SPECIFICITY;

EID: 65449185365     PISSN: 09288244     EISSN: 1574695X     Source Type: Journal    
DOI: 10.1111/j.1574-695X.2009.00549.x     Document Type: Article

References (21)

1. Abu Al-Soud W Radstrom P (2000) Effects of amplification facilitators on diagnostic PCR in the presence of blood, feces, and meat. J Clin Microbiol 38 : 4463 4470. (Pubitemid 32244535)
2. Amieva MR El-Omar EM (2008) Host-bacterial interactions in Helicobacter pylori infection. Gastroenterology 134 : 306 323. (Pubitemid 350309334)
3. Asaka M, Kimura T, Kudo M, Takeda H, Mitani S, Miyazaki T, Miki K Graham DY (1992) Relationship of Helicobacter pylori to serum pepsinogens in an asymptomatic Japanese population. Gastroenterology 102 : 760 766.
4. Cardenas VM, Dominguez DC, Puentes FA, Aragaki CC, Goodman KJ, Graham DY Fukuda Y (2008) Evaluation of a novel stool native catalase antigen test for Helicobacter pylori infection in asymptomatic North American children. J Pediatr Gastroenterol Nutr 46 : 399 402.
5. Cavallini A, Notarnicola M, Berloco P, Lippolis A De Leo A (2000) Use of macroporous polypropylene filter to allow identification of bacteria by PCR in human fecal samples. J Microbiol Meth 39 : 265 270. (Pubitemid 30004047)
6. Fox JG Wang TC (2007) Inflammation, atrophy, and gastric cancer. J Clin Invest 117 : 60 69. (Pubitemid 46048450)
7. Fujisawa T, Kumagai T, Akamatsu T, Kiyosawa K Matsunaga Y (1999) Changes in seroepidemiological pattern of Helicobacter pylori and hepatitis A virus over the last 20 years in Japan. Am J Gastroenterol 94 : 2094 2099. (Pubitemid 29374537)
8. Hatakeyama M (2006) Helicobacter pylori CagA - a bacterial intruder conspiring gastric carcinogenesis. Int J Cancer 119 : 1217 1223. (Pubitemid 44258793)
9. Higashi H, Tsutsumi R, Muto S, Sugiyama T, Azuma T, Asaka M Hatakeyama M (2002) SHP-2 tyrosine phosphatase as an intracellular target of Helicobacter pylori CagA protein. Science 295 : 683 686. (Pubitemid 34111828)
10. Kabir S (2001) Detection of Helicobacter pylori in faeces by culture, PCR and enzyme immunoassay. J Med Microbiol 50 : 1021 1029. (Pubitemid 33108907)
11. Kabir S (2004) Detection of Helicobacter pylori DNA in feces and saliva by polymerase chain reaction: a review. Helicobacter 9 : 115 123. (Pubitemid 38506593)
12. MacKay WG, Williams CL, McMillan M, Ndip RN, Shepherd AJ Weaver LT (2003) Evaluation of protocol using gene capture and PCR for detection of Helicobacter pylori DNA in feces. J Clin Microbiol 41 : 4589 4593. (Pubitemid 37259762)
13. Maeda S Mentis AF (2007) Pathogenesis of Helicobacter pylori infection. Helicobacter 12 (suppl 1) : 10 14. (Pubitemid 47312373)
14. Monteiro L, Gras N, Vidal R, Cabrita J Megraud F (2001) Detection of Helicobacter pylori DNA in human feces by PCR: DNA stability and removal of inhibitors. J Microbiol Meth 45 : 89 94. (Pubitemid 32322649)
15. Osawa H, Inoue F Yoshida Y (1996) Inverse relation of serum Helicobacter pylori antibody titres and extent of intestinal metaplasia. J Clin Pathol 49 : 112 115. (Pubitemid 26064915)
16. Russo F, Notarnicola M, Di Matteo G, Leoci C, Caruso ML, Pirrelli M, Caradonna M, Morandi L Di Leo A (1999) Detection of Helicobacter pylori cagA gene by polymerase chain reaction in faecal samples. Eur J Gastroen Hepat 11 : 251 256. (Pubitemid 29286678)
17. Sicinschi LA, Correa P, Bravo LE Schneider BG (2003a) Detection and typing of Helicobacter pylori cagA/vacA genes by radioactive, one-step polymerase chain reaction in stool samples from children. J Microbiol Meth 52 : 197 207. (Pubitemid 35379854)
18. Sicinschi LA, Correa P Schneider BG (2003b) Comparison of genotyping of Helicobacter pylori cagA and vacA virulence genes from gastric biopsies and stool specimens. Helicobacter 8 : 601 607. (Pubitemid 37553434)
19. Suzuki N, Wakasugi M, Nakaya S et al 2002) Production and application of new monoclonal antibodies specific for a fecal Helicobacter pylori antigen. Clin Diagn Lab Immun 9 : 75 78. (Pubitemid 34084278)
20. Yamagata H, Kiyohara Y, Aoyagi K et al 2000) Impact of Helicobacter pylori infection on gastric cancer incidence in a general Japanese population: the Hisayama study. Arch Intern Med 160 : 1962 1968. (Pubitemid 30437580)
21. Yamazaki S, Kato S, Matsukura N et al 2005) Identification of Helicobacter pylori and the cagA genotype in gastric biopsies using highly sensitive real-time PCR as a new diagnostic tool. FEMS Immunol Med Mic 44 : 261 268. (Pubitemid 40719960)