Physical localization and genetic mapping of the fertility restoration gene Rfo in canola (Brassic napus L.)

Genome

Volumn 52, Issue 4, 2009, Pages 401-407

  Feng, Jiuhuan ^a   Primomo, Valerio ^b   Li, Zenglu ^b,d   Zhang, Yongping ^b   Jan, Chao Chien ^c   Tulsieram, Lomas ^b   Xu, Steven S ^c  

^a NORTH DAKOTA STATE UNIVERSITY   (United States)

^b Pioneer Hi Bred Production Ltd   (Canada)

^c AGRICULTURAL RESEARCH SERVICE   (United States)

^d NONE

Author keywords

45s rDNA; BAC FISH; Canola (Brassica napus L.); Fertility restoration gene (Rfo); Mapping

Indexed keywords

PLANT DNA; VEGETABLE PROTEIN;

ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CHROMOSOME MAP; FERTILITY; FLUORESCENCE IN SITU HYBRIDIZATION; GENETICS; PLANT CHROMOSOME; RAPESEED;

BRASSICA NAPUS; CHROMOSOME MAPPING; CHROMOSOMES, ARTIFICIAL, BACTERIAL; CHROMOSOMES, PLANT; DNA, PLANT; FERTILITY; IN SITU HYBRIDIZATION, FLUORESCENCE; PLANT PROTEINS;

BACTERIA (MICROORGANISMS); BRASSICA NAPUS; BRASSICA NAPUS VAR. NAPUS; BRASSICA OLERACEA; BRASSICA OLERACEA VAR. CAPITATA; BRASSICA RAPA; BRASSICA RAPA SUBSP. RAPA; RAPHANUS SATIVUS;

EID: 65349123520     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/G09-016     Document Type: Article

References (36)

1. Ali, H.B.M., Lysak, M.A., and Schubert, I. 2005. Chromosomal localization of rDNA in the Brassicaceae. Genome, 48:341-346. doi:10.1139/g05-014. PMID:15838557.
2. Appels, R., Gerlach, W.L., Dennis, E.S., Swift, H., and Peacock, W.J. 1980. Molecular and chromosomal organization of DNA sequences coding for the ribosomal RNAs in cereals. Chromo-soma, 78:293-311. doi:10.1007/ BF00327389.
3. Armstrong, S.J., Fransz, P., Marshall, D.F., and Jones, G.H. 1998. Physical mapping of DNA repetitive sequences to mitotic and meiotic chromosomes of Brassica oleracea var. alboglabra by fluorescence in situ hybridization. Heredity, 81:666-673. doi:10.1046/j.1365-2540. 1998.00432.x.
4. Bohuon, E.J.R., Keith, D.J., Parkin, I., Sharpe, A.G., and Lydiate, D.J. 1996. Alignment of the conserved C genomes of Brassica oleracea and Brassica napus. Theor. Appl. Genet. 93:833-839. doi:10.1007/BF00224083.
5. Brown, G.G., Formanová, N., Jin, H., Wargachuk, R., Dendy, C., Patil, P., et al. 2003. The radish Rfo restorer gene of Ogura cy- toplasmic male sterility encodes a protein with multiple pentetri-copeptide repeats. Plant J. 35:262-272. doi:10.1046/j.1365- 313X.2003.01799.x. PMID:12848830.
6. Delourme, R., Bouchereau, A., Hubert, N., Renard, M., and Landry, B.S. 1994. Identification of RAPD markers linked to a fertility restorer gene for the Ogura radish cytoplasmic male sterility of rapeseed (Brassica napus L.). Theor. Appl. Genet. 88:741-748. doi:10.1007/BF01253979.
7. Desloire, S., Gherbi, H., Laloui, W., Marhadour, S., Clouet, V., Cattolico, L., et al. 2003. Identification of the fertility restoration locus, Rfo, in radish, as a member of the pentatricopeptide-re-peat protein family. EMBO Rep. 4:588-594. doi:10.1038/sj. embor.embor848.
8. Dong, F., Songm, J., Naessm, S.K., Helgesonm, J.P., Gebhardt, C., and Jiang, J. 2000. Development and applications of a set of chromosome-specific cytogenetic DNA markers in potato. Theor. Appl. Genet. 101:1001-1007. doi:10.1007/s001220051573.
9. Fu, T.D. 1981. Production and research of rapeseed in the People's Republic of China. Eucarpia Cruciferae Newsl. 6:6-7.
10. Fukui, K., Nakayama, S., Ohmido, N., Yoshiaki, H., and Yamabe, M. 1998. Quantitative karyotyping of three diploid Brassica species by imaging methods and localization of 45S rDNA loci on the identified chromosomes. Theor. Appl. Genet. 96:325-330. doi:10.1007/s001220050744.
11. Gerlach, W.L., and Bedbrook, J.R. 1979. Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucleic Acids Res. 7:1869-1885. doi:10.1093/nar/7.7.1869. PMID: 537913.
12. Giancola, S., Marhadour, S., Desloire, S., Clouet, V., Falentin-Guyomarc'h, H., Laloui, W. et al. 2003. Characterization of a radish introgression carrying the Ogura fertility restorer gene Rfo in rapeseed, using the Arabidopsis genome sequence and radish genetic mapping. Theor. Appl. Genet. 107:1442-1451. doi:10.1007/s00122-003-1381- 2. PMID:12942173.
13. Hasterok, R., Jenkins, G., Langdon, T., Jones, R.N., and Malus- zynska, J. 2001. Ribosomal DNA is an effective marker of Brassica chromosomes. Theor. Appl. Genet. 103:486-190. doi:10. 1007/s001220100653.
14. Heyn, F.W. 1976. Transfer of restorer genes from Raphanus to cytoplasmic male sterile Brassica napus. Eucarpia Cruciferae Newsl. 1:15-16.
15. Howell, E.C., Barker, G.C., Jones, G.H., Kearsey, M.J., King, G.J., Kop, E.P., et al. 2002. Integration of the cytogenetic and genetic linkage maps of Brassica oleracea. Genetics, 161:1225-1234. PMID:12136025.
16. Howell, E.C., Kearsey, M.J., Jones, G.H., King, G.J., and Armstrong, S.J. 2008. A and C genome distinction and chromosome identification in Brassica napus by sequential fluorescence in situ hybridization and genomic in situ hybridization. Genetics, 180:1849-1857. doi:10.1534/genetics.108.095893. PMID: 18845839.
17. Hu, X., Sullivan-Gilbert, M., Kubik, T., Danielson, J., Hnatiuk, N., Marchione, W., et al. 2008. Mapping of the Ogura fertility restorer gene Rfo and development of Rfo allele-specific markers in canola (Brassica napus L.). Mol. Breed. 22:663-674. doi:10. 1007/s11032-008-9207-1.
18. Jiang, J., Gill, B.S., Wang, G.L., Ronald, P.C., and Ward, D.C. 1995. Metaphase and interphase fluorescence in situ hybridization mapping of the rice genome with bacterial artificial chromosomes. Proc. Natl. Acad. Sci. U.S.A. 92:4487-4491. doi:10. 1073/pnas.92.10.4487. PMID:7753830.
19. Kamisugi, Y., Nakayama, S., O'Neil, C.M., Mathias, R.J., Trick, M., and Fukui, K. 1998. Visualization of the Brassica self-incompatibility S-locus on identified oilseed rape chromosomes. Plant Mol. Biol. 38:1081-1087. doi:10.1023/A:1006036100987. PMID:9869414.
20. Kim, J.S., Childs, K.L., Islam-Faridi, M.N., Menz, M.A., Klein, R.R., Klein, P.E., et al. 2002. Integrated karyotyping of sorghum by in situ hybridization of landed BACs. Genome, 45:402-412. doi:10.1139/g01-141. PMID:11962637.
21. Koo, D.H., Plaha, P., Lim, Y.P., Hur, Y., and Bang, J.W. 2004. A high-resolution karyotype of Brassica rapa ssp. pekinensis revealed by pachytene analysis and multicolor fluorescence in situ hybridization. Theor. Appl. Genet. 109:1346-1352. doi:10. 1007/s00122-004-1771-0. PMID:15365626.
22. Kosambi, D.D. 1944. The estimation of map distances from recombination values. Ann. Eugen. 12:172-175.
23. Levan, A., Frekga, K., and Sandberg, A. 1964. Nomenclature for-centromeric position in chromosomes. Hereditas, 52:201-220.
24. Maluszynska, J., and Heslop-Harrison, J.S. 1993. Physical mapping of rDNA loci in Brassica species. Genome, 36:774-781. doi:10. 1139/g93-102. PMID:18470023.
25. Ogura, H. 1968. Studies on the new male-sterility in Japanese radish with special reference to the utilisation of this sterility towards the practical raising of hybrid seeds. Mem. Fac. Agric. Kagoshima Univ. 6:39-78.
26. Parkin, I., Magrath, R., Keith, D., Sharpe, A., Mithen, R., and Lydiate, D. 1994. Genetics of aliphatic glucosinolates. II. Hy-droxylation of alkenyl glucosinolates in Brassica napus. Heredity, 72:594-598. doi:10.1038/hdy.1994.82.
27. Pelletier, G., Primard, C., Vedel, F., Chetrit, P., and Remy, R. 1983. Intergeneric cytoplasmic hybridization in Cruciferae by protoplast fusion. Mol. Gen. Genet. 191:244-250. doi:10.1007/BF00334821.
28. Schrader, O., Budahn, H., and Ahne, R. 2000. Detection of 5S and 25S rRNA genes in Sinapis alba, Raphanus sativus and Brassica napus by double fluorescence in situ hybridization. Theor. Appl. Genet. 100:665-669. doi:10.1007/s001220051337.
29. Shiga, T., and Baba, S. 1971. Cytoplasmic male sterility in rape plants (Brassica napus L.). Jpn. J. Breed. 21:16-17.
30. Snowdon, R.J., Friedrich, T., Friedt, W., and Kohler, W. 2002. Identifying the chromosomes of the A- and C-genome diploid Brassica species B. rapa (syn. campestris) and B. oleracea in their amphidiploid B. napus. Theor. Appl. Genet. 104:533-538. doi:10.1007/s00122-001-0787-y. PMID:12582655.
31. Udall, J.A., Quijada, P.A., and Osborn, T.C. 2005. Detection of chromosomal rearrangements derived from homeologous recombination in four mapping populations of Brassica napus L. Genetics, 169:967-979. doi:10.1534/genetics.104.033209. PMID: 15520255.
32. Van Ooijen, J.W., and Voorrips, R.E. 2001. JoinMap® version 3.0: software for the calculation of genetic linkage maps. Plant Research International, Wageningen, the Netherlands.
33. Wang, K., Guo, W.Z., and Zhang, T.Z. 2007. Development of one set of chromosome-specific microsatellite-containing BAC and their physical mapping in Gossypium hirsutum L. Theor. Appl. Genet. 115:675-682. doi:10.1007/s00122-007-0598-x. PMID: 17632699.
34. Wu, Y., Tulsieram, L., Tao, Q., Zhang, H.-B., and Rothstein, S.J. 2000. A binary vertor-based large insert library for Brassica na-pus and identification of clones linked to a fertility restorer locus for Ogura cytoplasmic male sterility (CMS). Genome, 43:102-109. doi:10.1139/gen-43-1-102. PMID:10701119.
35. Yang, T.J., Kim, J.S., Lim, K.B., Kwon, S.J., Kim, J.A., Jin, M., et al. 2005. The Korea Brassica Genome Project: a glimpse of the Brassica genome based on comparative genome analysis with Arabidopsis. Comp. Funct. Genomics, 6:138-146. doi:10.1002/cfg.465. PMID:18629219.
36. Ziolkowski, P.A., and Sadowski, J. 2002. FISH-mapping of rDNAs and Arabidopsis BACs on pachytene complements of selected Brassicas. Genome,45:189-197. doi:10.1139/g01-101. PMID: 11908661.