메뉴 건너뛰기




Volumn 4, Issue 1, 2009, Pages

Systematic comparison of RNA extraction techniques from frozen and fresh lung tissues: Checkpoint towards gene expression studies

Author keywords

[No Author keywords available]

Indexed keywords


EID: 64749102588     PISSN: None     EISSN: 17461596     Source Type: Journal    
DOI: 10.1186/1746-1596-4-9     Document Type: Article
Times cited : (39)

References (27)
  • 5
    • 0023832964 scopus 로고
    • Purification and analysis of RNA from paraffin-embedded tissues
    • 2483655 10.1038/nbt0188-56
    • Purification and analysis of RNA from paraffin-embedded tissues. GM Rupp J Locker, Biotechniques 1988 6 56 60 2483655 10.1038/nbt0188-56
    • (1988) Biotechniques , vol.6 , pp. 56-60
    • Rupp, G.M.1    Locker, J.2
  • 6
    • 0033571272 scopus 로고    scopus 로고
    • Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples
    • 10536153 10.1093/nar/27.22.4436
    • Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples. N Masuda T Ohnishi S Kawamoto M Monden K Okubo, Nucleic Acids Res 1999 27 4436 4443 10536153 10.1093/nar/27.22.4436
    • (1999) Nucleic Acids Res , vol.27 , pp. 4436-4443
    • Masuda, N.1    Ohnishi, T.2    Kawamoto, S.3    Monden, M.4    Okubo, K.5
  • 7
    • 33644975004 scopus 로고    scopus 로고
    • RNA integrity and the effect on the real-time qRT-PCR performance
    • 10.1016/j.mam.2005.12.003
    • RNA integrity and the effect on the real-time qRT-PCR performance. S Fleige MW Pfaffl, Mol Aspect of Med 2006 27 126 139 10.1016/j.mam.2005.12.003
    • (2006) Mol Aspect of Med , vol.27 , pp. 126-139
    • Fleige, S.1    Pfaffl, M.W.2
  • 8
    • 34250308050 scopus 로고    scopus 로고
    • RNA quality in frozen breast cancer samples and the influence on gene expression analysis - A comparison of three evaluation methods using microcapillary electrophoresis traces
    • 17519006 10.1186/1471-2199-8-38
    • RNA quality in frozen breast cancer samples and the influence on gene expression analysis - a comparison of three evaluation methods using microcapillary electrophoresis traces. C Strand J Enell I Hedenfalk M Fernö BMC Mol Biol 2007 8 38 17519006 10.1186/1471-2199-8-38
    • (2007) BMC Mol Biol , vol.8 , pp. 38
    • Strand, C.1    Enell, J.2    Hedenfalk, I.3    Fernö, M.4
  • 11
    • 7044286287 scopus 로고    scopus 로고
    • Evaluation of quality-control criteria for microarray gene expression analysis
    • 10.1373/clinchem.2004.033225 15364885
    • Evaluation of quality-control criteria for microarray gene expression analysis. CI Dumur NS Best AM Archer KJ Ladd AC Mas VR Wilkinson, Clin Chem 2004 50 1994 2002 10.1373/clinchem.2004.033225 15364885
    • (2004) Clin Chem , vol.50 , pp. 1994-2002
    • Dumur, C.I.1    Best, N.S.2    Archer, A.M.3    Ladd, K.J.4    Mas, A.C.5    Wilkinson, V.R.6
  • 12
    • 0028817155 scopus 로고
    • Validity of nucleic acid purities monitored by 260 nm/280 nm absorbance ratios
    • 7702855
    • Validity of nucleic acid purities monitored by 260 nm/280 nm absorbance ratios. JA Glasel, Biotechniques 1995 18 62 63 7702855
    • (1995) Biotechniques , vol.18 , pp. 62-63
    • Glasel, J.A.1
  • 13
    • 0030004766 scopus 로고    scopus 로고
    • Use of UV methods for measurement of protein and nucleic acid concentrations
    • 8780864
    • Use of UV methods for measurement of protein and nucleic acid concentrations. KL Manchester, Biotechniques 1996 20 968 970 8780864
    • (1996) Biotechniques , vol.20 , pp. 968-970
    • Manchester, K.L.1
  • 14
    • 2442643013 scopus 로고    scopus 로고
    • Molecular quality of exfoliated cervical cells: Implications for molecular epidemiology and biomarker discovery
    • 15006929
    • Molecular quality of exfoliated cervical cells: implications for molecular epidemiology and biomarker discovery. AH Habis SD Vernon DR Lee M Verma ER Unger, Cancer Epidemiol Biomarkers Prev 2004 13 492 6 15006929
    • (2004) Cancer Epidemiol Biomarkers Prev , vol.13 , pp. 492-6
    • Habis, A.H.1    Vernon, S.D.2    Lee, D.R.3    Verma, M.4    Unger, E.R.5
  • 15
    • 0025268157 scopus 로고
    • A micro method for the isolation of total RNA from adipose tissue
    • 10.1016/0003-2697(90)90572-Q 1694062
    • A micro method for the isolation of total RNA from adipose tissue. K Tavangar AR Hoffman FB Kraemer, Anal Biochem 1990 186 60 63 10.1016/0003- 2697(90)90572-Q 1694062
    • (1990) Anal Biochem , vol.186 , pp. 60-63
    • Tavangar, K.1    Hoffman, A.R.2    Kraemer, F.B.3
  • 16
    • 0026680228 scopus 로고
    • RNA isolation from cartilage using density gradient centrifugation in cesium trifluoroacetate: An RNA preparation technique effective in the presence of high proteoglycan content
    • 10.1016/0003-2697(92)90324-Z 1384388
    • RNA isolation from cartilage using density gradient centrifugation in cesium trifluoroacetate: an RNA preparation technique effective in the presence of high proteoglycan content. G Smale J Sasse, Anal Biochem 1992 203 352 56 10.1016/0003-2697(92)90324-Z 1384388
    • (1992) Anal Biochem , vol.203 , pp. 352-56
    • Smale, G.1    Sasse, J.2
  • 17
    • 0025783310 scopus 로고
    • Improved RNA isolation from cells in tissue culture using a commercial nucleic acid extractor
    • 1716926
    • Improved RNA isolation from cells in tissue culture using a commercial nucleic acid extractor. PR Briscoe TJ Jorgensen, Biotechniques 1991 10 594 96 1716926
    • (1991) Biotechniques , vol.10 , pp. 594-96
    • Briscoe, P.R.1    Jorgensen, T.J.2
  • 18
    • 0023277545 scopus 로고
    • Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction
    • 10.1016/0003-2697(87)90021-2 2440339
    • Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. P Chomczynski N Sacchi, Anal Biochem 1987 162 156 159 10.1016/0003-2697(87)90021-2 2440339
    • (1987) Anal Biochem , vol.162 , pp. 156-159
    • Chomczynski, P.1    Sacchi, N.2
  • 19
    • 34250308050 scopus 로고    scopus 로고
    • RNA quality in frozen breast cancer samples and the influence on gene expression analysis - A comparison of three evaluation methods using microcapillary electrophoresis traces
    • 17519006 10.1186/1471-2199-8-38
    • RNA quality in frozen breast cancer samples and the influence on gene expression analysis - a comparison of three evaluation methods using microcapillary electrophoresis traces. C Strand J Enell I Hedenfalk M Fernö BMC Mol Biol 2007 8 38 17519006 10.1186/1471-2199-8-38
    • (2007) BMC Mol Biol , vol.8 , pp. 38
    • Strand, C.1    Enell, J.2    Hedenfalk, I.3    Fernö, M.4
  • 20
    • 41649119636 scopus 로고    scopus 로고
    • RNA extraction from ten year old formalin-fixed paraffin-embedded breast cancer samples: A comparison of column purification and magnetic bead-based technologies
    • 18154675 10.1186/1471-2199-8-118
    • RNA extraction from ten year old formalin-fixed paraffin-embedded breast cancer samples: a comparison of column purification and magnetic bead-based technologies. A Ribeiro-Silva H Zhang SS Jeffrey, BMC Mol Biol 2007 8 118 18154675 10.1186/1471-2199-8-118
    • (2007) BMC Mol Biol , vol.8 , pp. 118
    • Ribeiro-Silva, A.1    Zhang, H.2    Jeffrey, S.S.3
  • 21
    • 0035025274 scopus 로고    scopus 로고
    • Comparison of different methods of total RNA extraction for viral detection in sputum
    • 10.1016/S0166-0934(01)00284-1
    • Comparison of different methods of total RNA extraction for viral detection in sputum. X Xiang D Qiu RD Hegele WC Tan, J Virol Method 2001 94 129 135 10.1016/S0166-0934(01)00284-1
    • (2001) J Virol Method , vol.94 , pp. 129-135
    • Xiang, X.1    Qiu, D.2    Hegele, R.D.3    Tan, W.C.4
  • 22
    • 0032926691 scopus 로고    scopus 로고
    • Immuno LCM: Laser capture microdissection of immunostained frozen sections for mRNA analysis
    • 9916919
    • Immuno LCM: laser capture microdissection of immunostained frozen sections for mRNA analysis. F Fend M Emmert-Buck R Chuaqui, Am J Pathol 1999 154 61 66 9916919
    • (1999) Am J Pathol , vol.154 , pp. 61-66
    • Fend, F.1    Emmert-Buck, M.2    Chuaqui, R.3
  • 23
    • 0025918568 scopus 로고
    • A rapid, accurate, nonradioactive method for quantitating RNA on agarose gels
    • 1809320
    • A rapid, accurate, nonradioactive method for quantitating RNA on agarose gels. JA Bonini C Hofmann, Biotechniques 1991 11 708 710 1809320
    • (1991) Biotechniques , vol.11 , pp. 708-710
    • Bonini, J.A.1    Hofmann, C.2
  • 24
    • 0014424030 scopus 로고
    • Fractionation of ribonucleic acids by 'Sephadex' agarose gel electrophoresis
    • 10.1038/218293a0 5648235
    • Fractionation of ribonucleic acids by 'Sephadex' agarose gel electrophoresis. R Vendrely K Alexandrov MC De Sousa Lechner Y Coirault, Nature 1968 218 293 294 10.1038/218293a0 5648235
    • (1968) Nature , vol.218 , pp. 293-294
    • Vendrely, R.1    Alexandrov, K.2    De Sousa Lechner, M.C.3    Coirault, Y.4
  • 25
    • 28644452204 scopus 로고    scopus 로고
    • Towards standardization of RNA quality assessment using user-independent classifiers of microcapillary electrophoresis traces
    • 15800207 10.1093/nar/gni054
    • Towards standardization of RNA quality assessment using user-independent classifiers of microcapillary electrophoresis traces. S Imbeaud E Graudens V Boulanger X Barlet P Zaborski E Eveno O Mueller A Schroeder C Auffray, Nucleic Acids Res 2005 33 e56 15800207 10.1093/nar/gni054
    • (2005) Nucleic Acids Res , vol.33 , pp. 56
    • Imbeaud, S.1    Graudens, E.2    Boulanger, V.3    Barlet, X.4    Zaborski, P.5    Eveno, E.6    Mueller, O.7    Schroeder, A.8    Auffray, C.9
  • 27
    • 64749112032 scopus 로고    scopus 로고
    • Ocimum Bio solutions. http://www.ocimumbio.com/web/arrays/assets/ downloads/manuals/manual-ecoli-starterkit.pdf
    • Ocimum Bio Solutions


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.