Purification and characterization of an anticalcifying protein from the seeds of Trachyspermum ammi (L.)

Protein and Peptide Letters

Volumn 16, Issue 2, 2009, Pages 173-181

  Kaur, Tanzeer ^a   Bijarnia, Rakesh K ^a   Singla, Surinder K ^b   Tandon, Chanderdeep ^a  

^a JAYPEE UNIVERSITY OF INFORMATION TECHNOLOGY   (India)

^b PANJAB UNIVERSITY   (India)

Author keywords

Anticalcifying; Calcium oxalate; Inhibitory protein; Trachyspermum ammi; Urolithiasis

Indexed keywords

CALCIUM OXALATE;

APIALES; ARTICLE; CHEMISTRY; DRUG ANTAGONISM; HUMAN; ION EXCHANGE CHROMATOGRAPHY; ISOELECTRIC POINT; MASS SPECTROMETRY; METABOLISM; PEPTIDE MAPPING; PLANT SEED; UROLITHIASIS;

APIACEAE; CALCIUM OXALATE; CHROMATOGRAPHY, ION EXCHANGE; HUMANS; ISOELECTRIC POINT; PEPTIDE MAPPING; SEEDS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; UROLITHIASIS;

AMMI VISNAGA; TRACHYSPERMUM AMMI; VITACEAE; VITIS VINIFERA;

EID: 63449121314     PISSN: 09298665     EISSN: None     Source Type: Journal    
DOI: 10.2174/092986609787316252     Document Type: Article

References (49)

1. Schroder, F.H. Association of calcium oxalate monohydrate crystals with MDCK cells. (1995) Kidney Int., 48, 129.
2. Halabe, A. and Sutton, R.A. (1992) in Disorders of bone and mineral metabolism (Coe. F.L., Favus, M.J., Eds), pp. 671-84. Raven.press., New York.
3. Moghadam, M.F., Tandon, C., Aggarwal, S., Singla, S.K., Singh, S.K., Sharma, S.K., Varshney, G.C. and Jethi, R.K. Concentration of a potent calcium oxalate monohydrate crystal growth inhibitor in the urine of normal persons and kidney stone patients by ELISA-based assay system employing monoclonal antibodies. (2003) J. Cell. Biochem., 90, 1261.
4. Aggarwal, S., Tandon, C., Forouzandeh, M., Singla, S.K., Kiran, R. and Jethi, R.K. Role of a protein inhibitor isolated from human renal stone matrix in urolithia. (2005) Indian J. Biochem. Biophy., 42, 113.
5. Aggarwal, S., Tandon, C., Forouzandeh, M., Singla, S.K., Kiran, R. and Jethi, R.K. Role of biomolecules from human renal stone matrix on COM crystal growth. (2000) Mol. Cell. Biochem., 210, 109.
6. Tandon, C., Aggarwal, S., Forouzandeh, M. and Jethi, R.K. Inhibitors of in vitro mineralization from rabbit aorta and their role in biomineralization. (1998) J. Cell. Biochem., 68, 287.
7. Hoyer, J.R., Otvos, L. Jr. and Urge, L. Osteopontin in urinary stone formation. (1995) Ann. N. Y. Acad. Sci.,760, 257.
8. Terlecki, R.P. and Triest, J.A. A contemporary evaluation of the auditory hazard of extracorporeal shock wave lithotripsy. (2007) Urology, 70, 898.
9. Li, X., He, D., Zhang, L., Xue, Y, Cheng, X. and Luo, Y. Pyrrolidine dithiocarbamate attenuates shock wave induced MDCK cells injury via inhibiting nuclear factor-kappa B activation. (2007) Urol. Res., 35, 193.
10. Moran, M.E., Hynynen, K., Bottaccini, M.R. and Drach, G.W. Cavitation and thermal phenomena associated with high energy shock waves-in vitro and in vivo measurements. (1990) J. Urol., 142, 388.
11. Suhr, D., Brummer, F. and Hulser, D.F. Cavitation-generated free radicals during shock wave exposure: Investigations with cell-free solutions and suspended cells. (1991) Ultrasound Med. Biol., 17, 761.
12. Jethi, R.K., Duggal, B., Sahota, R.S., Gupta, M. and Sofat, LB. Effect of the aqueous extract of an Ayurvedic compound preparation on mineralization & demineralization reactions. (1983) Indian J. Med. Res., 78, 422.
13. Barros, M.E., Schor, N. and Boim, M.A. Effect of an aqueous extract from P. niruri on calcium oxalate crystallization in vitro. (2003) Urol. Res., 30, 374.
14. Grases, F., Costa-Bauza, A. and Prieto, R.M. Renal lithiasis and nutrition. (2006) Nutr. J., 5, 23.
15. Bown, D. (1995) Encyclopaedia of herbs and their Uses. The royal horticultural society, Dorling Kindersley: London.
16. st ed. (1986) Glossary Indian Med. Plants, NISCAIR: New Delhi, 120.
17. Christina, A.J., Ashok, K., Packialakshmi, M., Tobin, G.C., Preethi, J. and Murugesh, N. Antilithiatic effect of Asparagus racemosus willd on ethylene glycol induced lithiasis in male albino Wistar rats. (2005) Methods Find. Exp. Clin. Pharmacol, 27, 633.
18. Atmani, F., Farell, G. and Lieske, J.C. Extract from Herniaria hirsuta coats calcium oxalate monohydrate crystals and blocks their adhesion to renal epithelial cells. (2004) J. Urol, 172, 1510.
19. Joshi, V.S., Parekh, B.B., Joshi, M.J. and Vaidya, A.D. Inhibition of the growth of urinary calcium hydrogen phosphate dihydrate crystals with aqueous extracts of Tribulus terrestris and Bergenia ligulata. (2005) Urol. Res., 33, 80.
20. Chutipongtanate, S., Nakagawa, Y., Sritippayawan, S., Pittayamateekul, J., Parichatikanond, P., Westley, B.R., May, F.E., Malasit, P. and Thongboonkerd, V. Identification of human urinary trefoil factor 1 as a novel calcium oxalate crystal growth inhibitor. (2005) J. Clin. Invest., 115, 3613.
21. Nakagawa, Y., Kaiser, E.T. and Coe, F.L. Isolation and characterization of calcium oxalate crystal growth inhibitors from human urine. (1978) Biochem. Biophys. Res. Commun., 84, 1038.
22. Trinder, P. Colorimetric microdetermination of calcium in serum. (1960) Analyst, 85, 889.
23. Gomori, H.D. A modifiaction of colorimetric phosphorous determination for use with photoelectric colorimeter. (1941) J. Lab. Clin. Med., 27, 955.
24. Laemmli, U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. (1970) Nature, 227, 680.
25. Elkin, R.G. and Wasynczuk, A. M. Amino acid analysis of feedstuff hydrolysates by precolumn derivatization with phenylisothiocyanate and reversed-phase high-performance liquid chromatography. (1987) Cereal. Chem., 64, 226.
26. Yang, V.C. and Langer, R. pH-dependent binding analysis, a new and rapid method for isoelectric point estimation. (1985) Anal. Biochem., 147, 148.
27. Pearl, F.M., Martin, N., Bray, J.E., Buchan, D.W., Harrison, A.P., Lee, D., Reeves, G.A., Shepherd, A.J., Sillitoe, I., Todd, A.E., Thornton, J.M. and Orengo, C.A. A rapid classification protocol for the CATH Domain Database to support structural genomics. (1997) Nucleic Acids Res., 25, 3389.
28. Schultz, J., Milpetz, F., Bork, P. and Ponting, C.P. SMART, a simple modular architecture research tool: identification of signaling domains. (1998) Proc. Natl. Acad. Sci. USA, 95, 5857.
29. Letunic, I., Copley, R.R., Pils, B., Pinkert, S., Schultz, J. and Bork, P. SMART 5: domains in the context of genomes and networks. (2006) Nucleic Acids Res., 34, 257.
30. Lowry, O.H., Rosebrough, N.J., Farr, A.L. and Randall, R.J. Protein measurement with the folin phenol reagent. (1951) J. Biol. Chem., 193, 265.
31. Hess, B. Tamm-Horsfall glycoprotein inhibitor or promoter of calcium oxalate monohydrate crystallization processes. (1992) Urol. Res., 20, 83.
32. Shiraga, H., Min, W., VanDusen, W.J., Clayman, M.D., Miner, D., Terrell, C.H., Sherbotie, J.R., Foreman, J.W., Przysiecki, C. and Neilson, E.G. Inhibition of calcium oxalate crystal growth in vitro by uropontin: another member of the aspartic acid-rich protein superfamily. (1992) Proc. Natl. Acad. Sci. USA, 89, 426.
33. Atmani, F. and Khan S.R. Role of urinary bikunin in the inhibition of calcium oxalate crystallization. (1999) J. Am. Soc. Nephrol, 10, S385.
34. Webb, M.A. Cell mediated crystallization of calcium oxalate in plants. (1999) Plant Cell, 11, 751.
35. Nakata, P.A. Advances in our understanding of calcium oxalate crystal formation and function in plants. (2003) Plant Sci., 164, 901.
36. Li, X., Zhang, D., Lynch-Holm, V.J., Okita, T.W. and Franceschi, V.R. Isolation of a crystal matrix protein associated with calcium oxalate precipitation in vacuoles of specialized cells. (2003) Plant Physiol, 133, 549.
37. Addadi, L. and Weiner S. Interactions between acid proteins and crystals: stereochemical requirements in biomineralization. (1985) Proc. Natl. Acad. Sci. USA, 82, 4110.
38. Jáuregui-Zúñiga, D., Reyes-Grajeda, J.P. and Moreno, A. Modifications on the morphology of synthetically-grown calcium oxalate crystals by crystal-associated proteins isolated from bean seed coats (Phaseolus vulgaris). (2005) Plant Sci., 168, 1163.
39. Arnott, H.J. and Webb, M.A. Twinned Raphides of Calcium Oxalate in Grape (Vitis): Implications for Crystal Stability and Function. (2000) Int. J. Plant Sci., 161, 133.
40. Jaillon, O., Aury, J.M., Noel, B., Policriti, A., Clepet, C., Casagrande, A., Choisne, N., Aubourg, S., Vitulo, N., Jubin, C., Vezzi, A., Legeai, F., Hugueney, P., Dasilva, C., Horner, D., Mica, E., Jublot, D., Poulain, J., Bruyère, C., Billault, A., Segurens, B., Gouyvenoux, M., Ugarte, E., Cattonaro, F., Anthouard, V., Vico, V., Del Fabbro, C., Alaux, M., Di Gaspero, G., Dumas, V., Felice, N., Paillard, S., Juman, I., Moroldo, M., Scalabrin, S., Canaguier, A., Le Clainche, I., Malacrida, G., Durand, E., Pesole, G., Laucou, V., Chatelet, P., Merdinoglu, D., Delledonne, M., Pezzotti, M., Lecharny, A., Scarpelli, C., Artiguenave, F., Pè, M.E., Valle, G., Morgante, M., Caboche, M., Adam-Blondon, A.F., Weissenbach, J., Quétier, F. and Wincker, P. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. (2007) Nature, 449, 463.
41. Strynadka, N.C.J. and James, M.N.G. Crystal structures of the helix-loop-helix calcium-binding proteins. (1989) Annu. Rev. Biochem., 58,951.
42. Herzberg, O. and James M.N.G. Structure of the calcium regulatory muscle protein troponin-C at 2.8Å resolution. (1985) Nature, 313, 653.
43. Mustafi, D. and Nakagawa, Y. Characterization of calcium-binding sites in the kidney stone inhibitor glycoprotein nephrocalcin with vanadyl ions: Electron paramagnetic resonance and electron nuclear double resonance spectroscopy. (1994) Proc. Natl. Acad. Sci. USA, 91, 11323.
44. Pillay, S.N., Asplin, J.R. and Coe, F.L. Evidence that calgranulin is produced by kidney cells and is an inhibitor of calcium oxalate crystallization. (1998) Am. J. physiol Ren. Physiol, 44, F255.
45. DellAngelica, E.C., Schleicher, C.H. and Santome, J.A. Primary structure and binding properties of calgranulin C., a novel S100-like calcium-binding protein from pig granulocytes. (1994) J. Biol. Chem., 269, 28929.
46. Hohenester, E., Maurer, P. and Timp, R. Crystal structure of a pair of follistatin-like and EF-hand calcium-binding domains in BM-40. (1997) EMBO. J., 16, 3778.
47. Kohri, K., Umekawa, T., Kodama, M., Katayama, Y., Ishikawa, Y., Takada, M., Katoh, Y., Kataoka, K., Iguchi, M. and Kurita, T. Inhibitory effect of glutamic acid and aspartic acid on calcium oxalate crystal formation. (1990) Eur. Urol, 17, 173.
48. Gul, A. and Peter, R. Models for protein to bind calcium oxalate surfaces. (2007) Urol. Res., 35, 65.
49. Wang, L., Qiu, S.R., Zachowicz, W., Guan, X., Deyoreo, J.J., Nancollas, G.H. and Hoyer J.R. Modulation of calcium oxalate crystallization by linear aspartic acid-rich peptides. (2006) Langmuir, 22, 7279.