A model for the oscillatory motion of single dynein molecules

Journal of Theoretical Biology

Volumn 232, Issue 1, 2005, Pages 27-39

  Goedecke, D Michael ^a   Elston, Timothy C ^b  

^a NORTH CAROLINA STATE UNIVERSITY   (United States)

^b The University of North Carolina at Chapel Hill   (United States)

Author keywords

Detailed balance; Langevin equation; Molecular motor; Stochastic process

Indexed keywords

ADENOSINE TRIPHOSPHATE; MOLECULAR MOTOR;

THEORETICAL STUDY;

ARTICLE; HYDROLYSIS; MATHEMATICAL ANALYSIS; MATHEMATICAL COMPUTING; MICROTUBULE; MOLECULE; OSCILLATION; PRIORITY JOURNAL; STATISTICS;

ANIMALS; BIOLOGICAL CLOCKS; DYNEIN ATPASE; MECHANOTRANSDUCTION, CELLULAR; MODELS, BIOLOGICAL; MOLECULAR MOTOR PROTEINS; STOCHASTIC PROCESSES;

EUKARYOTA;

EID: 6344289422     PISSN: 00225193     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jtbi.2004.07.017     Document Type: Article

References (19)

1. C.J. Brokaw Stochastic simulation of processive and oscillatory sliding using a two-headed model for axonemal dynein Cell Motil. Cytoskeleton 47 2000 108 119
2. S.A. Burgess, M.L. Walker, H. Sakakibara, P.J. Knight, and K. Oiwa Dynein structure and power stroke Nature 421 2003 715 718
3. L.A. Fox, and W.S. Sale Direction of force generated by the inner row of dynein arms on flagellar microtubules J. Cell Biol. 105 1987 1781 1787
4. I.R. Gibbons Dynein ATPases as microtubule motors J. Biol. Chem. 263 1988 15837 15840
5. D. Gillespie Exact stochastic simulation of coupled chemical reactions J. Chem. Phys. 81 1977 2340 2361
6. E.L. Holzbaur, and K.A. Johnson ADP release is rate limiting in steady-state turnover by the dynein adenosinetriphosphatase Biochemistry 28 1989 5577 5585
7. S.J. Iyadurai, M.G. Li, S.P. Gilbert, and T.S. Hays Evidence for cooperative interactions between the two motor domains of cytoplasmic dynein Curr. Biol. 9 1999 771 774
8. K.A. Johnson The pathway of ATP hydrolysis by dynein. Kinetics of a presteady state phosphate burst J. Biol. Chem. 258 1983 13825 13832
9. K.A. Johnson Pathway of the microtubule-dynein ATPase and the structure of dynein a comparison with actomyosin Annu. Rev. Biophys. Biophys. Chem. 14 1985 161 188
10. C.K. Omoto, and K.A. Johnson Activation of the dynein adenosinetriphosphatase by microtubules Biochemistry 25 1986 419 427
11. M.E. Porter, and K.A. Johnson Transient state kinetic analysis of the ATP-induced dissociation of the dynein-microtubule complex J. Biol. Chem. 258 1983 6582 6587
12. W.S. Sale, and P. Satir Direction of active sliding of microtubules in Tetrahymena cilia Proc. Natl Acad. Sci. USA 74 1977 2045 2049
13. M. Schnitzer, and S. Block Statistical kinetics of processive enzymes Cold Spring Harbor Symp. Quant. Biol. 60 1995 793 802
14. T. Shimizu, and K.A. Johnson Kinetic evidence for multiple dynein ATPase sites J. Biol. Chem. 258 1983 13841 13846
15. C. Shingyoji, H. Higuchi, M. Yoshimura, E. Katayama, and T. Yanagida Dynein arms are oscillating force generators Nature 393 1998 711 714
16. T. Tani, and S. Kamimura Dynein-ADP as a force-generating intermediate revealed by a rapid reactivation of flagellar axoneme Biophys. J. 77 1999 1518 1527
17. R.D. Vale, and Y.Y. Toyoshima Rotation and translocation of microtubules in vitro induced by dyneins from Tetrahymena cilia Cell 52 1988 459 469
18. R.D. Vale, D.R. Soll, and I.R. Gibbons One-dimensional diffusion of microtubules bound to flagellar dynein Cell 59 1989 915 925
19. H. Wang, C.S. Peskin, and T.C. Elston A robust numerical algorithm for studying biomolecular transport processes J. Theor. Biol. 221 2003 491 511