Genetic structures of natural populations of three mangrove species, Avicennia marina, Kandelia candel and Lumnitzera racemosa, in Vietnam revealed by maturase sequences of plastid DNA

Plant Species Biology

Volumn 19, Issue 2, 2004, Pages 91-99

  Kado, Tomoyuki ^a   Fujimoto, Akihiro ^a   Le, Huong Giang ^b   Tuan, Maisy ^c   Phan, Nguyen Hong ^c   Harada, Ko ^b   Tachida, Hidenori ^a  

^a KYUSHU UNIVERSITY   (Japan)

^b EHIME UNIVERSITY   (Japan)

^c VIETNAM NATIONAL UNIVERSITY   (Viet Nam)

Author keywords

Differentiation; DNA polymorphism; Migration; Plastid DNA; Vivipary

Indexed keywords

AVICENNIA MARINA; EMBRYOPHYTA; KANDELIA CANDEL; LUMNITZERA; LUMNITZERA RACEMOSA; RHIZOPHORACEAE;

EID: 6344277472     PISSN: 0913557X     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1442-1984.2004.00107.x     Document Type: Article

References (26)

1. Chiang T. Y., Chiang Y. C., Chen Y. J., Chou C. H., Havanond S., Hong T. N. & Huang S. (2001) Phylogeography of Kandelia candel in east Asiatic mangroves based on nucleotide variation of chloroplast and mitochondrial DNAs. Molecular Ecology 10: 2697-2710.
2. Clarke P. J., Kerrigan R. A. & Westphal C. J. (2001) Dispersal potential and early growth in 14 tropical mangroves: do early life history traits correlate with patterns of adult distribution? Journal of Ecology 89: 648-659.
3. Dodd R.S., Afzal-Rafii Z., Kashani N. & Budrick J. (2002) Land barriers and open oceans: effects on gene diversity and population structure in Avicennia germinans L. (Avicenniaceae). Molecular Ecology 11: 1327-1338.
4. Doyle J. J. & Doyle J. L. (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemistry Bulletin 19: 11-15.
5. Duke N. C. (1995) Genetic diversity, distributional barriers and rafting continents-more thoughts on the evolution of mangroves. Hydrobiologia 295: 167-181.
6. Duke N. C., Benzie J. A. H., Goodall J. A. & Ballment E. R. (1998) Genetic structure and evolution of species in the mangrove genus (Avicenniaceae) in the Indo-West Pacific. Evolution 52: 1612-1626.
7. Hamrick J. L. & Godt M. J. W. (1990) Allozyme diversity in plant species. In: Plant Population Genetics, Breeding and Genetic Resources (eds A. H. D. Brown, M. T. Clegg, A. L. Kahler & B. S. Weir), pp. 43-63. Sinauer, Sunderland, MA.
8. Hartl D. L. (2000) A Primer of Population Genetics. Sinauer, Sunderland, MA.
9. Hayashi K., Yoshida S., Utech H. & Kawano S. (2001) Molecular systematics in the genus Clintonia and related taxa based on rbcL and matK gene sequence data. Plant Species Biology 16: 119-137.
10. Hogarth P. J. (1999) The Biology of Mangroves. Oxford University Press, Oxford.
11. Hong P. N. & San H. T. (1993) Mangroves of Vietnam. IUCN, Bangkok, Thailand.
12. Huang S., Chiang Y. C., Schaal B. A., Chou C. H. & Chiang T. Y. (2001) Organelle DNA phylogeography of Cycas taitungensis, a relict species in Taiwan. Molecular Ecology 10: 2669-2681.
13. Kimura M. (1968) Evolutionary rate at the molecular level. Nature 217: 64-626.
14. Maguire T. L., Peakall R. & Saenger P. (2002) Comparative analysis of genetic diversity in the mangrove speccies Avicennia marina (Forsk.) Vierh. (Avicenniaceae) detected by AFLPs and SSRs. Theoretical and Applied Genetics 104: 388-389.
15. Maguire T. L., Saenger P., Baverstock P. & Hernfy R. (2000) Microsattellite analysis of genetic structure in the mangrove species Avicennia marina (Forsk.) Vierh. (Avicenniaceae). Molecular Ecology 9: 1853-1862.
16. Maruyama T. & Kimura M. (1980) Genetic variability and effective population size when local extinction and recolonization of subpopulations are frequent. Proceedings of the National Academy of Science, USA 77: 6710-6714.
17. Maxwell G. S. (1995) Ecogeographic variation in Kandelia candel from Brunei, Hong Kong and Thailand. Hydrobiologia 195: 59-65.
18. Miyashita N. T., Mori N. & Tsunewaki K. (1994) Molecular variation in chloroplast DNA regions in ancestral species of wheat. Genetics 137: 883-889.
19. Nei M. & Li W.-H. (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Science, USA 76: 5269-5273.
20. Ohsako T. & Ohnishi O. (2001) Nucleotide sequence variation of the chloroplast trnK/matK. region in two wile Fagopyrum (Polygonaceae) species, F. leptopodum and F. statice. Genes and Genetic Systems 76: 39-46.
21. Olmstead R. G. & Palmer J. D. (1994) Chloroplast DNA systematics: a review of methods and data analysis. American Journal of Botany 81: 1205-1124.
22. Sheue C.-R., Liu H.-Y. & Yong J. W. H. (2003) Kandelia ovobata (Rhizophoraceae), a new mangrove species from Eastern Asia. Taxon 52: 287-294.
23. Sun M., Wong K. C. & Lee J. S. Y. (1998) Reproductive biology and population genetics structure of Kandelia candel (Rhizophoraceae), a viviparous mangrove species. American Journal of Botany 85: 1631-1637.
24. Tajima F. (1993) Simple methods for testing the molecular evolutionary clock hypothesis. Genetics 135: 599-607.
25. Tomlinson P. B. (1986) The Botany of Mangroves. Cambridge University Press, Cambridge.
26. Wolfe K. H., Li W.-H. & Sharp P. M. (1987) Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast and nuclear DNAs. Proceedings of the National Academy of Science, USA 84: 9054-9058.