Molecular phylogeny of Neocalanus copepods in the subarctic Pacific Ocean, with notes on non-geographical genetic variations for Neocalanus cristatus

Journal of Plankton Research

Volumn 26, Issue 10, 2004, Pages 1249-1255

  Taniguchi, Marina ^a   Kanehisa, Toshinori ^a   Sawabe, Tomoo ^a   Christen, Richard ^b   Ikeda, Tsutomu ^a  

^a HOKKAIDO UNIVERSITY   (Japan)

^b CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

GENETIC VARIATION; INTRASPECIFIC VARIATION; PHYLOGENY; ZOOPLANKTON;

PACIFIC OCEAN;

COPEPODA; INVERTEBRATA; NEOCALANUS; NEOCALANUS CRISTATUS; NEOCALANUS FLEMINGERI; NEOCALANUS PLUMCHRUS;

EID: 6344232045     PISSN: 01427873     EISSN: None     Source Type: Journal    
DOI: 10.1093/plankt/fbh115     Document Type: Article

References (28)

1. Avise, J. C., Arnold, J. A., Ball, R. M. et al. (1987) Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annu. Rev. Ecol. Syst., 18, 489-522.
2. Birky, C. W., Fuerst, P. and Maruyama, T. (1989) Organelle gene diversity under migration, mutation, and drift: equilibrium expectations, approach to equilibrium, effects of heteroplasmic cells, and comparison to nuclear genes. Genetics, 121, 613-627.
3. Bradford, J. M. and Jillett, J. B. (1974) A revision of generic definitions in the Calanidae (Copepoda, Calanoida). Crustaceana, 27, 5-16.
4. Braga, E., Zardoya, R., Meyer, A. et al. (1999) Mitochondrial and nuclear rRNA based copepod phylogeny with emphasis on the Euchaetidae (Calanoida). Mar. Biol., 133, 79-90.
5. Bucklin, A. and Wiebe, P. H. (1998) Low mitochondrial diversity and small effective population sizes of the copepods Calanus finmarchicus and Nannocalanus minor. Possible impact of climatic variation during recent glaciation. J. Hered., 89, 383-392.
6. Bucklin, A., Frost, B. W. and Kocher, T. D. (1995) Molecular systematics of six Calanus and three Metridia species (Calanoida: Copepoda). Mar. Biol., 121, 655-664.
7. Bucklin, A., Bentley, A. M. and Franzen, S. P. (1998) Distribution and relative abundance of Pseudocalanus moultoni and P. newmani (Copepoda: Calanoida) on Georges Bank using molecular identification of sibling species. Mar. Biol., 132, 97-106.
8. Bucklin, A., Frost, B. W., Bradford-Grieve, J. et al. (2003) Molecular systematics and phylogenetic assessment of 34 calanoid copepod species of the Calanidae and Clausocalanidae. Mar. Biol., 142, 333-343.
9. Favorite, F., Dodimead, A. J. and Nasu, K. (1976) Oceanography of the subarctic Pacific region, 1960-1971. Bull. Int. North Pac. Fish. Comm., 33, 1-187.
10. Gascuel, O. (1997) BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data. Mol. Biol. Evol., 14. 685-695.
11. Kobari, T. and Ikeda, T. (1999) Vertical distribution, population structure and life cycle of Neocalanus cristatus (Crustacea: Copepoda) in the Oyashio region, with notes on its regional variations. Mar. Biol., 134, 683-696.
12. Kobari, T. and Ikeda, T. (2001a) Life cycle of Neocalanus flemingeri (Crustacea: Copepoda) in the Oyashio region, western subarctic Pacific, with notes on its regional variations. Mar. Ecol. Prog. Ser., 209, 243-255.
13. Kobari, T. and Ikeda, T. (2001b) Ontogenetic migration and life cycle of Neocalanus plumchrus (Crustacea: Copepoda) in the Oyashio region, with notes on regional variations in body sizes. J. Plankton Res., 23, 287-302.
14. Mauchline, J. (1998) The biology of calanoid copepods. Adv. Mar. Biol., 33, 1-710.
15. Miller, C. B. and Clemons, M. J. (1988) Revised life history analysis for large grazing copepods in the subarctic Pacific Ocean. Prog. Oceanogr., 20, 293-313.
16. Miller, C. B., Frost, B. W., Batchelder, H. P. et al. (1984) Life histories of large, grazing copepods in a subarctic ocean gyre: Neocalanus plumchrus, Neocalanus cristatus and Eucalanus bungii in the Northeast Pacific. Prog. Oceanogr., 13, 201-243.
17. Miller, K. J., Bradford-Crieve, J. M. and Jillett, J. B. (1999) Genetic relationship between winter deep-dwelling and spring surface-dwelling female Neocalanus tonsus in the Southern Ocean. Mar. Biol., 134, 99-106.
18. Motoda, S. and Minoda, T. (1974) Plankton of the Bering Sea. In Hood, D. W. and Kelley, E. J. (eds), Oceanography of the Bering Sea with Emphasis on Renewable Resources. Institute of Marine Sciences, University of Alaska, Fairbanks, AK, pp. 207-241.
19. Naganuma, T., Hisadome, K., Shiraishi, K. and Kojima, H. (1998) Molecular distinction of two resemblant abalones, Haliotis discus and Haliotis discus hannai by 18S rDNA sequences. J. Mar. Biotech., 6, 59-61.
20. Oba, T., Kato, M., Kitazato, H. et al. (1991) Paleoenvironmental changes in the Japan Sea during the last 85,000 years. Paleoceanography, 6, 499-518.
21. Ovenden, J. R. (1990) Mitochondrial DNA and marine stock assessment: a review. Aust. J. Mar. Freshw. Res., 41, 835-853.
22. Palumbi, S. R. and Benzie, J. (1991) Large mitochondrial DNA differences between morphologically similar panaeid shrimp. Mar. Biol. Biotechnol., 1, 27-34.
23. Perriere, G. and Gouy, M. (1996) WWW-query: an on-line retrieval system for biological sequence banks. Biochimie, 78, 364-369.
24. Spears, T. and Abele, L. G. (1997) Crustacean phylogeny inferred from 18S rDNA. In Fortey, R. A. and Thomas, R. H. (eds), Arthropod Relationships. The Systematics Association Special Volume Ser 55. Chapman & Hall, London/Weinheim/New York, pp. 169-187.
25. Spears, T., Abele, L. G. and Applegate, M. A. (1994) Phylogenetic study of cirripedes and selected relatives (Thecostraca) based on 18S rDNA sequence analysis. J. Crustac. Biol., 14, 641-665.
26. Tsuda, A., Saito, H. and Kasai, H. (1999) Life histories of Neocalanus flemingeri and Neocalanus plumchrus in the western subarctic Pacific. Mar. Biol., 135, 533-544.
27. Wada, H. and Satoh, N. (1994) Details of the evolutionary history from invertebrates to vertebrates, as deduced from the sequences of 18S rDNA. Proc. Natl. Acad. Sci. U. S. A., 91, 1801-1804.
28. Zenkevitch, L. (1963) Biology of the Seas of the U.S.S.R. George Allen and Unwin, London, 995 pp.