Peptide adsorption to lipid bilayers: Slow processes revealed by linear dichroism spectroscopy

Biophysical Journal

Volumn 96, Issue 4, 2009, Pages 1399-1407

  Ennaceur, Sue M ^a   Hicks, Matthew R ^b   Pridmore, Catherine J ^a   Dafforn, Tim R ^c   Rodger, Alison ^b   Sanderson, John M ^a  

^a DURHAM UNIVERSITY   (United Kingdom)

^b UNIVERSITY OF WARWICK   (United Kingdom)

^c UNIVERSITY OF BIRMINGHAM   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

LIPOSOME; PEPTIDE; PHOSPHORYLCHOLINE; TRYPTOPHAN; TYROSINE; CYCLOPEPTIDE;

ADSORPTION; ARTICLE; BETA SHEET; CIRCULAR DICHROISM; CONFORMATIONAL TRANSITION; LINEAR DICHROISM; LIPID BILAYER; MEMBRANE TRANSPORT; PROTEIN CONFORMATION; PROTEIN LIPID INTERACTION; ALGORITHM; CHEMISTRY; KINETICS; NONLINEAR SYSTEM; REGRESSION ANALYSIS; SPECTROSCOPY; SYNTHESIS;

ALGORITHMS; KINETICS; LEAST-SQUARES ANALYSIS; LIPID BILAYERS; LIPOSOMES; NONLINEAR DYNAMICS; PEPTIDES, CYCLIC; REGRESSION ANALYSIS; SPECTRUM ANALYSIS;

EID: 62649110419     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2008.10.039     Document Type: Article

References (33)

1. Ulmschneider, M. B., and M. S. Sansom. 2001. Amino acid distributions in integral membrane protein structures. Biochim. Biophys. Acta. 1512:1-14. (Pubitemid 32378779)
2. Landolt-Marticorena, C., K. A. Williams, C. M. Deber, and R. A. Reithmeier. 1993. Non-random distribution of amino acids in the transmembrane segments of human type I single span membrane proteins. J. Mol. Biol. 229:602-608. (Pubitemid 23068038)
3. Liu, W., and M. Caffrey. 2006. Interactions of tryptophan, tryptophan peptides, and tryptophan alkyl esters at curved membrane interfaces. Biochemistry. 45:11713-11726.
4. Sanderson, J. M. 2005. Peptide-lipid interactions: insights and perspectives. Org. Biomol. Chem. 3:201-212.
5. Sanderson, J. M., and E. J. Whelan. 2004. Characterization of the interactions of aromatic amino acids with diacetyl phosphatidylcholine. Phys. Chem. Chem. Phys. 6:1012-1017.
6. Sanderson, J. M. 2007. Refined models for the preferential interactions of tryptophan with phosphocholines. Org. Biomol. Chem. 5:3276-3286. (Pubitemid 47519065)
7. Killian, J. A. 2003. Synthetic peptides as models for intrinsic membrane proteins. FEBS Lett. 555:134-138. (Pubitemid 37431110)
8. Wimley, W. C., and S. H. White. 2000. Designing transmembrane alpha-helices that insert spontaneously. Biochemistry. 39:4432-4442. (Pubitemid 30212660)
9. de Planque, M. R. R., B. B. Bonev, J. A. A. Demmers, D. V. Greathouse, R. E. Koeppe, et al. 2003. Interfacial anchor properties of tryptophan residues in transmembrane peptides can dominate over hydrophobic matching effects in peptide-lipid interactions. Biochemistry. 42:5341-5348.
10. van der Wel, P. C. A., N. D. Reed, D. V. Greathouse, and R. E. Koeppe II. 2007. Orientation and motion of tryptophan interfacial anchors in membrane-spanning peptides. Biochemistry. 46:7514-7524. (Pubitemid 46986378)
11. Wimley, W. C., K. Hristova, A. S. Ladokhin, L. Silvestro, P. H. Axelsen, et al. 1998. Folding of beta-sheet membrane proteins: A hydrophobic hexapeptide model. J. Mol. Biol. 277:1091-1110.
12. Wimley, W. C., and S. H. White. 2004. Reversible unfolding of beta-sheets in membranes: a calorimetric study. J. Mol. Biol. 342:703-711.
13. Jin, Y., H. Mozsolits, J. Hammer, E. Zmuda, F. Zhu, et al. 2003. Influence of tryptophan on lipid binding of linear amphipathic cationic antimicrobial peptides. Biochemistry. 42:9395-9405.
14. Pan, Y. -L., J. T. -J. Cheng, J. Hale, J. Pan, R. E. W. Hancock, et al. 2007. Characterization of the structure and membrane interaction of the antimicrobial peptides aurein 2.2 and 2.3 from Australian southern bell frogs. Biophys. J. 92:2854-2864.
15. Clayton, A. H. A., and W. H. Sawyer. 2000. Oriented circular dichroism of a class a amphipathic helix in aligned phospholipid multilayers. Biochim. Biophys. Acta. 1467:124-130. (Pubitemid 30621591)
16. Ladokhin, A. S., and S. H. White. 2004. Interfacial folding and membrane insertion of a designed helical peptide. Biochemistry. 43:5782-5791. (Pubitemid 38623612)
17. Wu, Y., H. W. Huang, and G. A. Olah. 1990. Method of oriented circular dichroism. Biophys. J. 57:797-806. (Pubitemid 20111238)
18. Chen, F. -Y., M. -T. Lee, and H. W. Huang. 2003. Evidence for membrane thinning effect as the mechanism for peptide-induced pore formation. Biophys. J. 84:3751-3758. (Pubitemid 36637870)
19. Marrington, R., T. R. Dafforn, D. J. Halsall, J. I. MacDonald, M. Hicks, et al. 2005. Validation of new microvolume Couette flow linear dichroism cells. Analyst. 130:1608-1616.
20. Dafforn, T. R., J. Rajendra, D. J. Halsall, L. C. Serpell, and A. Rodger. 2004. Protein fiber linear dichroism for structure determination and kinetics in a low-volume, low-wavelength Couette flow cell. Biophys. J. 86:404-410.
21. Rodger, A., J. Rajendra, R. Marrington, M. Ardhammar, B. Nordén, et al. 2002. Flow oriented linear dichroism to probe protein orientation in membrane environments. Phys. Chem. Chem. Phys. 4:4051-4057.
22. Rodger, A., R. Marrington, M. A. Geeves, M. Hicks, L. de Alwis, et al. 2006. Looking at long molecules in solution: what happens when they are subjected to Couette flow? Phys. Chem. Chem. Phys. 8:3161-3171.
23. Caesar, C. E. B., E. K. Esbjorner, P. Lincoln, and B. Nordén. 2006. Membrane interactions of cell-penetrating peptides probed by tryptophan fluorescence and dichroism techniques: correlations of structure to cellular uptake. Biochemistry. 45:7682-7692.
24. Sanderson, J. M., and S. Yazdani. 2002. The design, synthesis and characterization of channel-forming peptides. Chem. Commun. 1154-1155.
25. Wohr, T., F. Wahl, A. Nefzi, B. Rohwedder, T. Sato, et al. 1996. Pseudo-prolines as a solubilizing, structure-disrupting protection technique in peptide synthesis. J. Am. Chem. Soc. 118:9218-9227.
26. Kates, S. A., N. A. Sole, C. R. Johnson, D. Hudson, G. Barany, et al. 1993. A novel, convenient, three-dimensional orthogonal strategy for solid-phase synthesis of cyclic peptides. Tetrahedron Lett. 34:1549-1552.
27. Pace, C. N., F. Vajdos, L. Fee, G. Grimsley, and T. Gray. 1995. How to measure and predict the molar absorbtion coefficient of a protein. Protein Sci. 4:2411-2423.
28. Tamm, L. K., H. Hong, and B. Liang. 2004. Folding and assembly of beta-barrel membrane proteins. Biochim. Biophys. Acta. 1666:250-263. (Pubitemid 39425208)
29. Ardhammar, M., P. Lincoln, and B. Nordén. 2001. Ligand substituents of ruthenium dipyridophenazine complexes sensitively determine orientation in liposome membrane. J. Phys. Chem. B. 105:11363-11368. (Pubitemid 35338488)
30. Greene, L. H., E. D. Chrysina, L. I. Irons, A. C. Papageorgiou, K. R. Acharya, et al. 2001. Role of conserved residues in structure and stability: tryptophans of human serum retinol-binding protein, a model for the lipocalin superfamily. Protein Sci. 10:2301-2316.
31. 31P solid-state NMR spectroscopy investigation. Biochemistry. 39:13106-13114.
32. de Planque, M. R. R., J. -W. P. Boots, D. T. S. Rijkers, R. M. J. Liskamp, D. V. Greathouse, et al. 2002. The effects of hydrophobic mismatch between phosphatidylcholine bilayers and transmembrane alpha-helical peptides depend on the nature of interfacially exposed aromatic and charged residues. Biochemistry. 41:8396-8404.
33. Surrey, T., and F. Jähnig. 1995. Kinetics of folding and membrane insertion of a beta-barrel membrane protein. J. Biol. Chem. 270: 28199-28203.