메뉴 건너뛰기




Volumn 33, Issue 4, 2009, Pages 723-731

Developing a tissue resource to characterize the genome of pancreatic cancer

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA;

EID: 62549098557     PISSN: 03642313     EISSN: 14322323     Source Type: Journal    
DOI: 10.1007/s00268-008-9877-1     Document Type: Review
Times cited : (9)

References (55)
  • 2
    • 33746858503 scopus 로고    scopus 로고
    • Pancreatic cancer: From bench to 5-year survival
    • J Kleeff C Michalski H Friess 2006 Pancreatic cancer: from bench to 5-year survival Pancreas 33 111 118
    • (2006) Pancreas , vol.33 , pp. 111-118
    • Kleeff, J.1    Michalski, C.2    Friess, H.3
  • 4
    • 42249087308 scopus 로고    scopus 로고
    • The complete genome of an individual by massively parallel DNA sequencing
    • DA Wheeler M Srinivasan M Egholm 2008 The complete genome of an individual by massively parallel DNA sequencing Nature 452 872 876
    • (2008) Nature , vol.452 , pp. 872-876
    • Wheeler, D.A.1    Srinivasan, M.2    Egholm, M.3
  • 5
    • 34948887787 scopus 로고    scopus 로고
    • Genomics: The personal side of genomics
    • N Blow 2007 Genomics: the personal side of genomics Nature 449 627 630
    • (2007) Nature , vol.449 , pp. 627-630
    • Blow, N.1
  • 6
    • 62549107634 scopus 로고    scopus 로고
    • Cancer Sequencing Projects (CSPs) [National Human Genome Research Institute website]
    • Cancer Sequencing Projects (CSPs) [National Human Genome Research Institute website]. http://www.genome.gov. Accessed April 2008
  • 7
    • 33947393565 scopus 로고    scopus 로고
    • Mapping the cancer genome. Pinpointing the genes involved in cancer will help chart a new course across the complex landscape of human malignancies
    • FS Collins AD Barker 2007 Mapping the cancer genome. Pinpointing the genes involved in cancer will help chart a new course across the complex landscape of human malignancies Sci Am 296 50 57
    • (2007) Sci Am , vol.296 , pp. 50-57
    • Collins, F.S.1    Barker, A.D.2
  • 8
    • 36248980204 scopus 로고    scopus 로고
    • Characterizing the cancer genome of lung adenocarcinoma
    • BA Weir MS Woo G Getz 2007 Characterizing the cancer genome of lung adenocarcinoma Nature 450 893 898
    • (2007) Nature , vol.450 , pp. 893-898
    • Weir, B.A.1    Woo, M.S.2    Getz, G.3
  • 10
    • 1242320288 scopus 로고    scopus 로고
    • Establishing a national tissue bank for surgically harvested cancer tissue
    • K Knox DJ Kerr 2004 Establishing a national tissue bank for surgically harvested cancer tissue Br J Surg 91 134 136
    • (2004) Br J Surg , vol.91 , pp. 134-136
    • Knox, K.1    Kerr, D.J.2
  • 11
    • 34548086778 scopus 로고    scopus 로고
    • The Genome Austria Tissue Bank (GATiB)
    • M Asslaber PM Abuja K Stark 2007 The Genome Austria Tissue Bank (GATiB) Pathobiology 74 251 258
    • (2007) Pathobiology , vol.74 , pp. 251-258
    • Asslaber, M.1    Abuja, P.M.2    Stark, K.3
  • 12
    • 33645233819 scopus 로고    scopus 로고
    • Further plans announced for national biobanks
    • C Tilstone 2006 Further plans announced for national biobanks Lancet Oncol 7 195 196
    • (2006) Lancet Oncol , vol.7 , pp. 195-196
    • Tilstone, C.1
  • 13
    • 33750974781 scopus 로고    scopus 로고
    • TuBaFrost 1: Uniting local frozen tumour banks into a European network: An overview
    • PH Riegman WN Dinjens MH Oomen 2006 TuBaFrost 1: uniting local frozen tumour banks into a European network: an overview Eur J Cancer 42 2678 2683
    • (2006) Eur J Cancer , vol.42 , pp. 2678-2683
    • Riegman, P.H.1    Dinjens, W.N.2    Oomen, M.H.3
  • 14
    • 33847607918 scopus 로고    scopus 로고
    • European Organisation for Research and Treatment of Cancer (EORTC) Pathobiology Group Standard operating procedure for the preparation of human tumour tissue extracts suited for the quantitative analysis of tissue-associated biomarkers.
    • M Schmitt K Mengele E Schueren 2007 European Organisation for Research and Treatment of Cancer (EORTC) Pathobiology Group Standard operating procedure for the preparation of human tumour tissue extracts suited for the quantitative analysis of tissue-associated biomarkers. Eur J Cancer 43 835 844
    • (2007) Eur J Cancer , vol.43 , pp. 835-844
    • Schmitt, M.1    Mengele, K.2    Schueren, E.3
  • 15
    • 3242662498 scopus 로고    scopus 로고
    • The cooperative prostate cancer tissue resource: A specimen and data resource for cancer researchers
    • J Melamed MW Datta MJ Becich 2004 The cooperative prostate cancer tissue resource: a specimen and data resource for cancer researchers Clin Cancer Res 10 4614 4621
    • (2004) Clin Cancer Res , vol.10 , pp. 4614-4621
    • Melamed, J.1    Datta, M.W.2    Becich, M.J.3
  • 16
    • 35748958757 scopus 로고    scopus 로고
    • Quality control of human tissues: Experience from the Indiana University Cancer Center-Lilly Research Labs human tissue bank
    • GE Sandusky KH Teheny M Esterman 2007 Quality control of human tissues: experience from the Indiana University Cancer Center-Lilly Research Labs human tissue bank Cell Tissue Bank 8 287 295
    • (2007) Cell Tissue Bank , vol.8 , pp. 287-295
    • Sandusky, G.E.1    Teheny, K.H.2    Esterman, M.3
  • 17
    • 42549156562 scopus 로고    scopus 로고
    • The development and deployment of Common Data Elements for tissue banks for translational research in cancer: An emerging standard based approach for the Mesothelioma Virtual Tissue Bank
    • SK Mohanty AT Mistry W Amin 2008 The development and deployment of Common Data Elements for tissue banks for translational research in cancer: an emerging standard based approach for the Mesothelioma Virtual Tissue Bank BMC Cancer 8 91
    • (2008) BMC Cancer , vol.8 , pp. 91
    • Mohanty, S.K.1    Mistry, A.T.2    Amin, W.3
  • 18
    • 34548070496 scopus 로고    scopus 로고
    • A virtual tissue bank for primary central nervous system lymphomas in immunocompetent individuals
    • M Ponzoni I Kwee L Mazzucchelli 2007 A virtual tissue bank for primary central nervous system lymphomas in immunocompetent individuals Pathobiology 74 264 269
    • (2007) Pathobiology , vol.74 , pp. 264-269
    • Ponzoni, M.1    Kwee, I.2    Mazzucchelli, L.3
  • 19
    • 30944433985 scopus 로고    scopus 로고
    • AP-HM tumour tissue bank: Molecular signature of gliomas
    • D Figarella-Branger C Colin O Chinot 2006 AP-HM tumour tissue bank: molecular signature of gliomas Med Sci (Paris) 22 54 59
    • (2006) Med Sci (Paris) , vol.22 , pp. 54-59
    • Figarella-Branger, D.1    Colin, C.2    Chinot, O.3
  • 20
  • 21
    • 0036244746 scopus 로고    scopus 로고
    • A research-based tumor tissue bank of gynecologic oncology: Characteristics of nucleic acids extracted from normal and tumor tissues from different sites
    • TY Chu KS Hwang MH Yu 2002 A research-based tumor tissue bank of gynecologic oncology: characteristics of nucleic acids extracted from normal and tumor tissues from different sites Int J Gynecol Cancer 12 171 176
    • (2002) Int J Gynecol Cancer , vol.12 , pp. 171-176
    • Chu, T.Y.1    Hwang, K.S.2    Yu, M.H.3
  • 22
    • 0024502949 scopus 로고
    • Special communication the cooperative human tissue network
    • KP Clausen WE Grizzle V Livolsi 1989 Special communication the cooperative human tissue network Cancer 63 1452 1455
    • (1989) Cancer , vol.63 , pp. 1452-1455
    • Clausen, K.P.1    Grizzle, W.E.2    Livolsi, V.3
  • 23
    • 62549163084 scopus 로고    scopus 로고
    • Human Cancer Biospecimen Core Resource (BCR) [The Tumor Gene Atlas website]
    • Human Cancer Biospecimen Core Resource (BCR) [The Tumor Gene Atlas website] http://cancergenome.nih.gov. Accessed April 2008
  • 25
    • 62549137560 scopus 로고    scopus 로고
    • BioBank Central
    • BioBank Central. www.biobankcentral.org. Accessed April 2008
  • 26
    • 84934443407 scopus 로고    scopus 로고
    • Biorepository standards and protocols for collecting, processing, and storing human tissues
    • D Troyer 2008 Biorepository standards and protocols for collecting, processing, and storing human tissues Methods Mol Biol 441 193 220
    • (2008) Methods Mol Biol , vol.441 , pp. 193-220
    • Troyer, D.1
  • 27
    • 84864250382 scopus 로고    scopus 로고
    • June Office of Biorepositories and Biospecimen Research [NCI website] Accessed April 2008
    • NCI Best Practices for Biospecimen Resources. June 2007. Office of Biorepositories and Biospecimen Research [NCI website] http://biospecimens. cancer.gov. Accessed April 2008
    • (2007) NCI Best Practices for Biospecimen Resources
  • 28
    • 0035190122 scopus 로고    scopus 로고
    • Avoiding biohazards in medical, veterinary and research laboratories
    • WE Grizzle J Fredenburgh 2001 Avoiding biohazards in medical, veterinary and research laboratories Biotech Histochem 76 183 206
    • (2001) Biotech Histochem , vol.76 , pp. 183-206
    • Grizzle, W.E.1    Fredenburgh, J.2
  • 29
    • 62549138422 scopus 로고    scopus 로고
    • CDC and NIH Biosafety in Microbiological and Biomedical Laboratories Accessed April 2008
    • CDC and NIH Biosafety in Microbiological and Biomedical Laboratories. http://bmbl.od.nih.gov. Accessed April 2008
  • 30
    • 33750037019 scopus 로고    scopus 로고
    • TuBaFrost 2: Standardising tissue collection and quality control procedures for a European virtual frozen tissue bank network
    • MM Morente R Mager S Alonso 2006 TuBaFrost 2: standardising tissue collection and quality control procedures for a European virtual frozen tissue bank network Eur J Cancer 42 2684 2691
    • (2006) Eur J Cancer , vol.42 , pp. 2684-2691
    • Morente, M.M.1    Mager, R.2    Alonso, S.3
  • 32
    • 33646000796 scopus 로고    scopus 로고
    • Genetics. No longer de-identified
    • AL McGuire RA Gibbs 2006 Genetics. No longer de-identified Science 312 370 371
    • (2006) Science , vol.312 , pp. 370-371
    • McGuire, A.L.1    Gibbs, R.A.2
  • 33
    • 33751241996 scopus 로고    scopus 로고
    • Currents in contemporary ethics: Meeting the growing demands of genetic research
    • AL McGuire RA Gibbs 2006 Currents in contemporary ethics: meeting the growing demands of genetic research J Law Med Ethics 34 809 812
    • (2006) J Law Med Ethics , vol.34 , pp. 809-812
    • McGuire, A.L.1    Gibbs, R.A.2
  • 34
    • 38549085235 scopus 로고    scopus 로고
    • Research ethics and the challenge of whole genome sequencing
    • AL McGuire T Caulfield MK Cho 2007 Research ethics and the challenge of whole genome sequencing Nat Rev Gen 9 152 156
    • (2007) Nat Rev Gen , vol.9 , pp. 152-156
    • McGuire, A.L.1    Caulfield, T.2    Cho, M.K.3
  • 35
    • 31644440090 scopus 로고    scopus 로고
    • Returning genetic research results to individuals: Points to consider
    • G Renegar CJ Webster S Stuerzebecker 2006 Returning genetic research results to individuals: points to consider Bioethics 20 24 36
    • (2006) Bioethics , vol.20 , pp. 24-36
    • Renegar, G.1    Webster, C.J.2    Stuerzebecker, S.3
  • 36
    • 33750388916 scopus 로고    scopus 로고
    • The emergence of an ethical duty to disclose genetic research results: International perspectives
    • BM Knoppers Y Joly J Simard 2006 The emergence of an ethical duty to disclose genetic research results: international perspectives Eur. J. Human Gen 14 1170 1178
    • (2006) Eur. J. Human Gen , vol.14 , pp. 1170-1178
    • Knoppers, B.M.1    Joly, Y.2    Simard, J.3
  • 37
    • 30644476605 scopus 로고    scopus 로고
    • Informing research participants of research results: Analysis of Canadian university based research ethics board policies
    • S MacNeil C Fernandez 2006 Informing research participants of research results: analysis of Canadian university based research ethics board policies J Med Ethics 32 49 54
    • (2006) J Med Ethics , vol.32 , pp. 49-54
    • MacNeil, S.1    Fernandez, C.2
  • 38
    • 34248647304 scopus 로고    scopus 로고
    • Reestablishing the researcher-patient compact
    • IS Kohane KD Mandi PL Taylor 2007 Reestablishing the researcher-patient compact Science 316 836 837
    • (2007) Science , vol.316 , pp. 836-837
    • Kohane, I.S.1    Mandi, K.D.2    Taylor, P.L.3
  • 39
    • 33749993417 scopus 로고    scopus 로고
    • The consensus coding sequences of human breast and colorectal cancers
    • T Sjöblom S Jones LD Wood DW Parsons J Lin 2006 The consensus coding sequences of human breast and colorectal cancers Science 314 268 274
    • (2006) Science , vol.314 , pp. 268-274
    • Sjöblom, T.1    Jones, S.2    Wood, L.D.3    Parsons, D.W.4    Lin, J.5
  • 40
    • 34548680046 scopus 로고    scopus 로고
    • Comment on "the consensus coding sequences of human breast and colorectal cancers"
    • Getz G, Höfling H, Mesirov JP et al (2007) Comment on "The consensus coding sequences of human breast and colorectal cancers". Science 317:1500
    • (2007) Science , vol.317 , pp. 1500
    • Getz, G.H.1
  • 41
    • 0032427750 scopus 로고    scopus 로고
    • Providing human tissues for research: How to establish a program
    • WE Grizzle R Aamodt K Clausen 1998 Providing human tissues for research: how to establish a program Arch Pathol Lab Med 122 1065 1076
    • (1998) Arch Pathol Lab Med , vol.122 , pp. 1065-1076
    • Grizzle, W.E.1    Aamodt, R.2    Clausen, K.3
  • 42
    • 34548182286 scopus 로고    scopus 로고
    • Tissue preparation: Tissue issues
    • N Blow 2007 Tissue preparation: tissue issues Nature 448 959 963
    • (2007) Nature , vol.448 , pp. 959-963
    • Blow, N.1
  • 43
    • 41649119636 scopus 로고    scopus 로고
    • RNA extraction from ten year old formalin-fixed paraffin-embedded breast cancer samples: A comparison of column purification and magnetic bead-based technologies
    • A Ribeiro-Silva H Zhang SS Jeffrey 2007 RNA extraction from ten year old formalin-fixed paraffin-embedded breast cancer samples: a comparison of column purification and magnetic bead-based technologies BMC Mol Biol 8 118
    • (2007) BMC Mol Biol , vol.8 , pp. 118
    • Ribeiro-Silva, A.1    Zhang, H.2    Jeffrey, S.S.3
  • 44
    • 34347249613 scopus 로고    scopus 로고
    • Effects of formalin fixation, paraffin embedding, and time of storage on DNA preservation in brain tissue: A BrainNet Europe study
    • I Ferrer J Armstrong S Capellari 2007 Effects of formalin fixation, paraffin embedding, and time of storage on DNA preservation in brain tissue: a BrainNet Europe study Brain Pathol 17 297 303
    • (2007) Brain Pathol , vol.17 , pp. 297-303
    • Ferrer, I.1    Armstrong, J.2    Capellari, S.3
  • 45
    • 41749093017 scopus 로고    scopus 로고
    • Effects of processing delay, formalin fixation, and immunohistochemistry on RNA recovery from formalin-fixed paraffin-embedded tissue sections
    • F van Maldegem M de Wit F Morsink 2008 Effects of processing delay, formalin fixation, and immunohistochemistry on RNA recovery from formalin-fixed paraffin-embedded tissue sections Diagn Mol Pathol 17 51 58
    • (2008) Diagn Mol Pathol , vol.17 , pp. 51-58
    • Van Maldegem, F.1    De Wit, M.2    Morsink, F.3
  • 46
    • 0036898005 scopus 로고    scopus 로고
    • Effect of fixatives and tissue processing on the content and integrity of nucleic acids
    • M Srinivasan D Sedmak S Jewell 2002 Effect of fixatives and tissue processing on the content and integrity of nucleic acids Am J Pathol 161 1961 1971
    • (2002) Am J Pathol , vol.161 , pp. 1961-1971
    • Srinivasan, M.1    Sedmak, D.2    Jewell, S.3
  • 47
    • 0035108505 scopus 로고    scopus 로고
    • Preservation of RNA for functional genomic studies: A multidisciplinary tumor bank protocol
    • SR Florell CM Coffin JA Holden 2001 Preservation of RNA for functional genomic studies: a multidisciplinary tumor bank protocol Mod Pathol 14 116 128
    • (2001) Mod Pathol , vol.14 , pp. 116-128
    • Florell, S.R.1    Coffin, C.M.2    Holden, J.A.3
  • 48
    • 9144220374 scopus 로고    scopus 로고
    • Comparison of frozen and RNALater solid tissue storage methods for use in RNA expression microarrays
    • GL Mutter D Zahrieh C Liu 2004 Comparison of frozen and RNALater solid tissue storage methods for use in RNA expression microarrays BMC Genomics 5 88
    • (2004) BMC Genomics , vol.5 , pp. 88
    • Mutter, G.L.1    Zahrieh, D.2    Liu, C.3
  • 50
    • 11144263678 scopus 로고    scopus 로고
    • Stability and heterogeneity of expression profiles in lung cancer specimens harvested following surgical resection
    • FH Blackhall M Pintilie DA Wigle 2004 Stability and heterogeneity of expression profiles in lung cancer specimens harvested following surgical resection Neoplasia 6 761 767
    • (2004) Neoplasia , vol.6 , pp. 761-767
    • Blackhall, F.H.1    Pintilie, M.2    Wigle, D.A.3
  • 51
    • 2942617082 scopus 로고    scopus 로고
    • Tissue ischemia time affects gene and protein expression patterns within minutes following surgical tumor excision
    • A Spruessel G Steimann M Jung 2004 Tissue ischemia time affects gene and protein expression patterns within minutes following surgical tumor excision Biotechniques 36 1030 1037
    • (2004) Biotechniques , vol.36 , pp. 1030-1037
    • Spruessel, A.1    Steimann, G.2    Jung, M.3
  • 52
    • 0027232296 scopus 로고
    • Detection of ras gene mutations in pancreatic juice and peripheral blood of patients with pancreatic adenocarcinoma
    • M Tada M Omata S Kawai 1993 Detection of ras gene mutations in pancreatic juice and peripheral blood of patients with pancreatic adenocarcinoma Cancer Res 53 2472 2474
    • (1993) Cancer Res , vol.53 , pp. 2472-2474
    • Tada, M.1    Omata, M.2    Kawai, S.3
  • 54
    • 62549095010 scopus 로고    scopus 로고
    • International Air Transport Association (IATA) Accessed April 2008
    • International Air Transport Association (IATA) Infectious Substances Shipping Guidelines 2006 http://www.iata.org. Accessed April 2008
    • Infectious Substances Shipping Guidelines 2006
  • 55
    • 62549109275 scopus 로고    scopus 로고
    • Occupation Safety and Health Administration (OSHA) Accessed April 2008
    • Occupation Safety and Health Administration (OSHA). Regulations on toxic and hazardous substances. http://www.osha.gov. Accessed April 2008
    • Regulations on Toxic and Hazardous Substances


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.