메뉴 건너뛰기




Volumn 26, Issue 4, 2009, Pages 875-891

Comparative analysis of structural diversity and sequence evolution in plant mitochondrial genes transferred to the nucleus (Molecular Biology and Evolution ((2009) 26 (875-891) DOI: 10.1093/molbev/msp011);Comparative analysis of structural diversity and sequence evolution in plant mitochondrial genes transferred to the nucleus

Author keywords

Genome evolution; Intron; Mitochondria; Targeting sequence

Indexed keywords

MAGNOLIOPHYTA;

EID: 62349138196     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msp061     Document Type: Erratum
Times cited : (52)

References (62)
  • 1
    • 0034676438 scopus 로고    scopus 로고
    • Repeated, recent and diverse transfers of a mitochondrial gene to the nucleus in flowering plants
    • Adams KL, Daley DO, Qiu YL, Whelan J, Palmer JD. 2000. Repeated, recent and diverse transfers of a mitochondrial gene to the nucleus in flowering plants. Nature. 408:354-357.
    • (2000) Nature , vol.408 , pp. 354-357
    • Adams, K.L.1    Daley, D.O.2    Qiu, Y.L.3    Whelan, J.4    Palmer, J.D.5
  • 2
    • 0035214797 scopus 로고    scopus 로고
    • Mitochondrial gene transfer in pieces: Fission of the ribosomal protein gene rpl2 and partial or complete gene transfer to the nucleus
    • Adams KL, Ong HC, Palmer JD. 2001. Mitochondrial gene transfer in pieces: fission of the ribosomal protein gene rpl2 and partial or complete gene transfer to the nucleus. Mol Biol Evol. 18:2289-2297.
    • (2001) Mol Biol Evol , vol.18 , pp. 2289-2297
    • Adams, K.L.1    Ong, H.C.2    Palmer, J.D.3
  • 3
    • 0344719444 scopus 로고    scopus 로고
    • Evolution of mitochondrial gene content: Gene loss and transfer to the nucleus
    • Adams KL, Palmer JD. 2003. Evolution of mitochondrial gene content: gene loss and transfer to the nucleus. Mol Phylogenet Evol. 29:380-395.
    • (2003) Mol Phylogenet Evol , vol.29 , pp. 380-395
    • Adams, K.L.1    Palmer, J.D.2
  • 4
    • 0037162534 scopus 로고    scopus 로고
    • Punctuated evolution of mitochondrial gene content: High and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution
    • Adams KL, Qiu YL, Stoutemyer M, Palmer JD. 2002. Punctuated evolution of mitochondrial gene content: high and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution. Proc Natl Acad Sci USA. 99:9905-9912.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 9905-9912
    • Adams, K.L.1    Qiu, Y.L.2    Stoutemyer, M.3    Palmer, J.D.4
  • 5
    • 0034917612 scopus 로고    scopus 로고
    • Multiple losses and transfers to the nucleus of two mitochondrial succinate dehydrogenase genes during angiosperm evolution
    • Adams KL, Rosenblueth M, Qiu YL, Palmer JD. 2001. Multiple losses and transfers to the nucleus of two mitochondrial succinate dehydrogenase genes during angiosperm evolution. Genetics. 158:1289-1300.
    • (2001) Genetics , vol.158 , pp. 1289-1300
    • Adams, K.L.1    Rosenblueth, M.2    Qiu, Y.L.3    Palmer, J.D.4
  • 6
    • 0033598682 scopus 로고    scopus 로고
    • Intracellular gene transfer in action: Dual transcription and multiple silencing of nuclear and mitochondrial cox2 genes in legume
    • Adams KL, Song K, Roessler PG, Nugent JM, Doyle JL, Doyle JJ, Palmer JD. 1999. Intracellular gene transfer in action: dual transcription and multiple silencing of nuclear and mitochondrial cox2 genes in legume. Proc Natl Acad Sci USA. 96:13863-13868.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 13863-13868
    • Adams, K.L.1    Song, K.2    Roessler, P.G.3    Nugent, J.M.4    Doyle, J.L.5    Doyle, J.J.6    Palmer, J.D.7
  • 7
    • 0023227343 scopus 로고
    • Sequences from a prokaryotic genome or the mouse dihydrofolate reductase gene can restore the import of a truncated precursor protein into yeast mitochondria
    • Baker A, Schatz G. 1987. Sequences from a prokaryotic genome or the mouse dihydrofolate reductase gene can restore the import of a truncated precursor protein into yeast mitochondria. Proc Natl Acad Sci USA. 84:3117-3121.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 3117-3121
    • Baker, A.1    Schatz, G.2
  • 8
    • 25444472044 scopus 로고    scopus 로고
    • transAlign: Using amino acids to facilitate the multiple alignment of protein-coding DNA sequences
    • Bininda-Emonds OR. 2005. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences. BMC Bioinformatics. 6:156.
    • (2005) BMC Bioinformatics , vol.6 , pp. 156
    • Bininda-Emonds, O.R.1
  • 9
    • 3142700743 scopus 로고    scopus 로고
    • Widespread paleopolyploidy in model plant species inferred from age distribution of duplicate gene
    • Blanc G, Wolfe KH. 2004. Widespread paleopolyploidy in model plant species inferred from age distribution of duplicate gene. Plant Cell. 16:1667-1678.
    • (2004) Plant Cell , vol.16 , pp. 1667-1678
    • Blanc, G.1    Wolfe, K.H.2
  • 10
    • 62349090681 scopus 로고    scopus 로고
    • Organellar genes: Why do they end up in the nucleus?
    • Blanchard JL, Lynch M. 2000. Organellar genes: why do they end up in the nucleus? J Mol Evol. 41:397-406.
    • (2000) J Mol Evol , vol.41 , pp. 397-406
    • Blanchard, J.L.1    Lynch, M.2
  • 11
    • 33244495781 scopus 로고    scopus 로고
    • Comparative analysis of bacterial-origin genes for plant mitochondrial ribosomal proteins
    • Bonen L, Calixte S. 2006. Comparative analysis of bacterial-origin genes for plant mitochondrial ribosomal proteins. Mol Biol Evol. 23:701-712.
    • (2006) Mol Biol Evol , vol.23 , pp. 701-712
    • Bonen, L.1    Calixte, S.2
  • 12
    • 39749142161 scopus 로고    scopus 로고
    • The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites
    • Chaw SM, Shih AC, Wang D, Wu YW, Liu SM, Chou TY. 2008. The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites. Mol Biol Evol. 25:603-615.
    • (2008) Mol Biol Evol , vol.25 , pp. 603-615
    • Chaw, S.M.1    Shih, A.C.2    Wang, D.3    Wu, Y.W.4    Liu, S.M.5    Chou, T.Y.6
  • 13
    • 33749993002 scopus 로고    scopus 로고
    • Evolutionary transfers of mitochondrial genes to the nucleus in the Populus lineage and coexpression of nuclear and mitochondrial Sdh4 genes
    • Choi C, Liu Z, Adams KL. 2006. Evolutionary transfers of mitochondrial genes to the nucleus in the Populus lineage and coexpression of nuclear and mitochondrial Sdh4 genes. New Phytol. 172:429-439.
    • (2006) New Phytol , vol.172 , pp. 429-439
    • Choi, C.1    Liu, Z.2    Adams, K.L.3
  • 14
    • 0029915525 scopus 로고    scopus 로고
    • Computational method to predict mitochondrially imported proteins and their targeting sequences
    • Claros MG, Vincens P. 2006. Computational method to predict mitochondrially imported proteins and their targeting sequences. Eur J Biochem. 241:779-786.
    • (2006) Eur J Biochem , vol.241 , pp. 779-786
    • Claros, M.G.1    Vincens, P.2
  • 15
    • 34248662670 scopus 로고    scopus 로고
    • When gene marriages don't work out: Divorce by subfunctionalization
    • Cusack BP, Wolfe KH. 2007. When gene marriages don't work out: divorce by subfunctionalization. Trends Genet. 23:270-272.
    • (2007) Trends Genet , vol.23 , pp. 270-272
    • Cusack, B.P.1    Wolfe, K.H.2
  • 17
    • 16644382582 scopus 로고    scopus 로고
    • Nuclear SDH2-1 and SDH2-2 genes, encoding the iron-sulfur subunit of mitochondrial complex II in Arabidopsis, have distinct cell-specific expression patterns and promoter activities
    • Elorza A, León G, Gómez I, Mouras A, Holuigue L, Araya A, Jordana X. 2004. Nuclear SDH2-1 and SDH2-2 genes, encoding the iron-sulfur subunit of mitochondrial complex II in Arabidopsis, have distinct cell-specific expression patterns and promoter activities. Plant Physiol. 136:4072-4087.
    • (2004) Plant Physiol , vol.136 , pp. 4072-4087
    • Elorza, A.1    León, G.2    Gómez, I.3    Mouras, A.4    Holuigue, L.5    Araya, A.6    Jordana, X.7
  • 18
    • 0034697980 scopus 로고    scopus 로고
    • Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
    • Emanuelsson O, Nielsen H, Brunak S, von Heijne G. 2000. Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J Mol Biol. 300:1005-1016.
    • (2000) J Mol Biol , vol.300 , pp. 1005-1016
    • Emanuelsson, O.1    Nielsen, H.2    Brunak, S.3    von Heijne, G.4
  • 19
    • 33845890795 scopus 로고    scopus 로고
    • Mitochondrial diversity of early-branching metazoa is revealed by the completemt genome of a haplosclerid demosponge
    • Erpenbeck D, Voigt O, Adamski M, Adamska M, Hooper JN, Wörheide G, Degnan BM. 2007. Mitochondrial diversity of early-branching metazoa is revealed by the completemt genome of a haplosclerid demosponge. Mol Biol Evol. 24:19-22.
    • (2007) Mol Biol Evol , vol.24 , pp. 19-22
    • Erpenbeck, D.1    Voigt, O.2    Adamski, M.3    Adamska, M.4    Hooper, J.N.5    Wörheide, G.6    Degnan, B.M.7
  • 20
    • 17444414554 scopus 로고    scopus 로고
    • Fate of mitochondrially located S19 ribosomal protein genes after transfer of a functional copy to the nucleus in cereals
    • Fallahi M, Crosthwait J, Calixte S, Bonen L. 2005. Fate of mitochondrially located S19 ribosomal protein genes after transfer of a functional copy to the nucleus in cereals. Mol Genet Genomics. 273:76-83.
    • (2005) Mol Genet Genomics , vol.273 , pp. 76-83
    • Fallahi, M.1    Crosthwait, J.2    Calixte, S.3    Bonen, L.4
  • 21
    • 62349129090 scopus 로고    scopus 로고
    • Felsenstein J. 2008. PHYLIP phylogeny inference package, version 3.6.8. Seattle: University of Washington
    • Felsenstein J. 2008. PHYLIP (phylogeny inference package), version 3.6.8. Seattle: University of Washington.
  • 22
    • 0040370341 scopus 로고    scopus 로고
    • Transfer of rps14 from the mitochondrion to the nucleus in maize implied integration within a gene encoding the iron-sulphur subunit of succinate dehydrogenase and expression by alternative splicing
    • Figueroa P, Gómez I, Holuigue L, Araya A, Jordana X. 1999. Transfer of rps14 from the mitochondrion to the nucleus in maize implied integration within a gene encoding the iron-sulphur subunit of succinate dehydrogenase and expression by alternative splicing. Plant J. 18:601-609.
    • (1999) Plant J , vol.18 , pp. 601-609
    • Figueroa, P.1    Gómez, I.2    Holuigue, L.3    Araya, A.4    Jordana, X.5
  • 23
    • 0034952468 scopus 로고    scopus 로고
    • Three different genes encode the iron-sulfur subunit of succinate dehydrogenase in Arabidopsis thaliana
    • Figueroa P, León G, Elorza A, Holuigue L, Jordana X. 2001. Three different genes encode the iron-sulfur subunit of succinate dehydrogenase in Arabidopsis thaliana. Plant Mol Biol. 46:241-250.
    • (2001) Plant Mol Biol , vol.46 , pp. 241-250
    • Figueroa, P.1    León, G.2    Elorza, A.3    Holuigue, L.4    Jordana, X.5
  • 24
    • 0025850375 scopus 로고
    • Transfer of rpl22 to the nucleus greatly preceded its loss from the chloroplast and involved the gain of an intron
    • Gantt JS, Baldauf SL, Calie PJ, Weeden NF, Palmer JD. 1991. Transfer of rpl22 to the nucleus greatly preceded its loss from the chloroplast and involved the gain of an intron. EMBO J. 10:3073-3078.
    • (1991) EMBO J , vol.10 , pp. 3073-3078
    • Gantt, J.S.1    Baldauf, S.L.2    Calie, P.J.3    Weeden, N.F.4    Palmer, J.D.5
  • 25
    • 52549130466 scopus 로고    scopus 로고
    • Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species
    • Gissi C, Iannelli F, Pesole G. 2008. Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species. Heredity. 101:301-320.
    • (2008) Heredity , vol.101 , pp. 301-320
    • Gissi, C.1    Iannelli, F.2    Pesole, G.3
  • 26
    • 0032169540 scopus 로고    scopus 로고
    • Mitochondrial protein import in plants. Signals, sorting, targeting, processing and regulation
    • Glaser E, Sjöling S, Tanudji M, Whelan J. 1998. Mitochondrial protein import in plants. Signals, sorting, targeting, processing and regulation. Plant Mol Biol. 38:311-338.
    • (1998) Plant Mol Biol , vol.38 , pp. 311-338
    • Glaser, E.1    Sjöling, S.2    Tanudji, M.3    Whelan, J.4
  • 27
    • 0027073347 scopus 로고
    • The endosymbiont hypothesis revisited
    • Gray MW. 1992. The endosymbiont hypothesis revisited. Int Rev Cytol. 141:233-357.
    • (1992) Int Rev Cytol , vol.141 , pp. 233-357
    • Gray, M.W.1
  • 28
    • 0032762209 scopus 로고    scopus 로고
    • Evolution of organellar genomes
    • Gray MW. 1999. Evolution of organellar genomes. Curr Opin Genet Dev. 9:678-687.
    • (1999) Curr Opin Genet Dev , vol.9 , pp. 678-687
    • Gray, M.W.1
  • 29
    • 62349097043 scopus 로고    scopus 로고
    • Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser. 41:95-98.
    • Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser. 41:95-98.
  • 30
    • 35548982703 scopus 로고    scopus 로고
    • Status of genes encoding the mitochondrial S1 ribosomal protein in closely-related legumes
    • Hazle T, Bonen L. 2007. Status of genes encoding the mitochondrial S1 ribosomal protein in closely-related legumes. Gene. 405:108-116.
    • (2007) Gene , vol.405 , pp. 108-116
    • Hazle, T.1    Bonen, L.2
  • 32
    • 37649007931 scopus 로고    scopus 로고
    • Jansen RK, Cai Z, Raubeson LA, et al. (11 co-authors). 2007. Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns. Proc Natl Acad Sci USA. 104:19369-19374.
    • Jansen RK, Cai Z, Raubeson LA, et al. (11 co-authors). 2007. Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns. Proc Natl Acad Sci USA. 104:19369-19374.
  • 33
    • 0029822746 scopus 로고    scopus 로고
    • Targeting presequence acquisition after mitochondrial gene transfer to the nucleus occurs by duplication of existing targeting signals
    • Kadowaki K, Kubo N, Ozawa K, Hirai A. 1996. Targeting presequence acquisition after mitochondrial gene transfer to the nucleus occurs by duplication of existing targeting signals. EMBO J. 15:6652-6661.
    • (1996) EMBO J , vol.15 , pp. 6652-6661
    • Kadowaki, K.1    Kubo, N.2    Ozawa, K.3    Hirai, A.4
  • 34
    • 0030727612 scopus 로고    scopus 로고
    • Interorganellar gene transfer in bryophytes: The functional nad7 gene is nuclear encoded in Marchantia polymorpha
    • Kobayashi Y, Knoop V, Fukuzawa H, Brennicke A, Ohyama K. 1997. Interorganellar gene transfer in bryophytes: the functional nad7 gene is nuclear encoded in Marchantia polymorpha. Mol Gen Genet. 256:589-592.
    • (1997) Mol Gen Genet , vol.256 , pp. 589-592
    • Kobayashi, Y.1    Knoop, V.2    Fukuzawa, H.3    Brennicke, A.4    Ohyama, K.5
  • 35
    • 0033529792 scopus 로고    scopus 로고
    • A single nuclear transcript encoding mitochondrial RPS14 and SDHB of rice is processed by alternative splicing: Common use of the same mitochondrial targeting signal for different proteins
    • Kubo N, Harada K, Hirai A, Kadowaki K. 1999. A single nuclear transcript encoding mitochondrial RPS14 and SDHB of rice is processed by alternative splicing: common use of the same mitochondrial targeting signal for different proteins. Proc Natl Acad Sci USA. 96:9207-9211.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 9207-9211
    • Kubo, N.1    Harada, K.2    Hirai, A.3    Kadowaki, K.4
  • 36
    • 0033799602 scopus 로고    scopus 로고
    • Transfer of the mitochondrial rps10 gene to the nucleus in rice: Acquisition of the 5′ untranslated region followed by gene duplication
    • Kubo N, Jordana X, Ozawa K, Zanlungo S, Harada K, Sasaki T, Kadowaki K. 2000. Transfer of the mitochondrial rps10 gene to the nucleus in rice: acquisition of the 5′ untranslated region followed by gene duplication. Mol Gen Genet. 263:733-739.
    • (2000) Mol Gen Genet , vol.263 , pp. 733-739
    • Kubo, N.1    Jordana, X.2    Ozawa, K.3    Zanlungo, S.4    Harada, K.5    Sasaki, T.6    Kadowaki, K.7
  • 37
    • 0030914649 scopus 로고    scopus 로고
    • Molecular evolution of angiosperm mitochondrial introns and exons
    • Laroche J, Li P, Maggia L, Bousquet J. 1997. Molecular evolution of angiosperm mitochondrial introns and exons. Proc Natl Acad Sci USA. 94:5722-5727.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 5722-5727
    • Laroche, J.1    Li, P.2    Maggia, L.3    Bousquet, J.4
  • 38
    • 27744526687 scopus 로고    scopus 로고
    • Origin, evolution and genetic effects of nuclear insertions of organelle DNA
    • Leister D. 2005. Origin, evolution and genetic effects of nuclear insertions of organelle DNA. Trends Genet. 21:655-663.
    • (2005) Trends Genet , vol.21 , pp. 655-663
    • Leister, D.1
  • 39
    • 40149101897 scopus 로고    scopus 로고
    • Molecular adaptation and expression evolution following duplication of genes for organellar ribosomal protein S13 in rosids
    • Liu SL, Adams KL. 2008. Molecular adaptation and expression evolution following duplication of genes for organellar ribosomal protein S13 in rosids. BMC Evol Biol. 8:25.
    • (2008) BMC Evol Biol , vol.8 , pp. 25
    • Liu, S.L.1    Adams, K.L.2
  • 40
    • 0030034587 scopus 로고    scopus 로고
    • Mutation accumulation in transfer RNAs: Molecular evidence for Muller's ratchet in mitochondrial genomes
    • Lynch M. 1996. Mutation accumulation in transfer RNAs: molecular evidence for Muller's ratchet in mitochondrial genomes. Mol Biol Evol. 13:209-220.
    • (1996) Mol Biol Evol , vol.13 , pp. 209-220
    • Lynch, M.1
  • 41
    • 0035056576 scopus 로고    scopus 로고
    • Millen RS, Olmstead RG, Adams KL, et al. (11 co-authors). 2001. Many parallel losses of infA from chloroplast DNA during angiosperm evolution with multiple independent transfers to the nucleus. Plant Cell. 13:645-658.
    • Millen RS, Olmstead RG, Adams KL, et al. (11 co-authors). 2001. Many parallel losses of infA from chloroplast DNA during angiosperm evolution with multiple independent transfers to the nucleus. Plant Cell. 13:645-658.
  • 42
    • 0031193638 scopus 로고    scopus 로고
    • Structure and subcellular localization of a small RNA-binding protein from tobacco
    • Moriguchi K, Sugita M, Sugiura M. 1997. Structure and subcellular localization of a small RNA-binding protein from tobacco. Plant J. 12:215-221.
    • (1997) Plant J , vol.12 , pp. 215-221
    • Moriguchi, K.1    Sugita, M.2    Sugiura, M.3
  • 43
    • 34548568981 scopus 로고    scopus 로고
    • Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants
    • Mower JP, Touzet P, Gummow JS, Delph LF, Palmer JD. 2007. Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants. BMC Evol Biol. 7:135.
    • (2007) BMC Evol Biol , vol.7 , pp. 135
    • Mower, J.P.1    Touzet, P.2    Gummow, J.S.3    Delph, L.F.4    Palmer, J.D.5
  • 44
    • 33644702018 scopus 로고    scopus 로고
    • Adaptations required for mitochondrial import following mitochondrial to nucleus gene transfer of ribosomal protein S10
    • Murcha MW, Rudhe C, Elhafez D, Adams KL, Daley DO, Whelan J. 2005. Adaptations required for mitochondrial import following mitochondrial to nucleus gene transfer of ribosomal protein S10. Plant Physiol. 138:2134-2144.
    • (2005) Plant Physiol , vol.138 , pp. 2134-2144
    • Murcha, M.W.1    Rudhe, C.2    Elhafez, D.3    Adams, K.L.4    Daley, D.O.5    Whelan, J.6
  • 45
    • 0026558482 scopus 로고    scopus 로고
    • Oda K, Yamato K, Ohta E, et al. (11 co-authors). 1992. Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA. A primitive form of plant mitochondrial genome. J Mol Biol. 223:1-7.
    • Oda K, Yamato K, Ohta E, et al. (11 co-authors). 1992. Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA. A primitive form of plant mitochondrial genome. J Mol Biol. 223:1-7.
  • 46
    • 85003342377 scopus 로고    scopus 로고
    • Pervasive survival of expressed mitochondrial rps14 pseudogenes in grasses and their relatives for 80 million years following three functional transfers to the nucleus
    • Ong HC, Palmer JD. 2006. Pervasive survival of expressed mitochondrial rps14 pseudogenes in grasses and their relatives for 80 million years following three functional transfers to the nucleus. BMC Evol Biol. 6:55.
    • (2006) BMC Evol Biol , vol.6 , pp. 55
    • Ong, H.C.1    Palmer, J.D.2
  • 47
    • 0030203863 scopus 로고    scopus 로고
    • TreeView: An application to display phylogenetic trees on personal computers
    • Page RD. 1996. TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci. 12:357-358.
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.1
  • 48
    • 37849032457 scopus 로고    scopus 로고
    • Rensing SA, Lang D, Zimmer AD, et al. (70 co-authors). 2008. The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science. 319:64-69.
    • Rensing SA, Lang D, Zimmer AD, et al. (70 co-authors). 2008. The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science. 319:64-69.
  • 50
    • 2942589051 scopus 로고    scopus 로고
    • Predotar: A tool for rapidly screening proteomes for N-terminal targeting sequences
    • Small I, Peeters N, Legeai F, Lurin C. 2004. Predotar: a tool for rapidly screening proteomes for N-terminal targeting sequences. Proteomics. 4:1581-1590.
    • (2004) Proteomics , vol.4 , pp. 1581-1590
    • Small, I.1    Peeters, N.2    Legeai, F.3    Lurin, C.4
  • 52
    • 33745581744 scopus 로고    scopus 로고
    • Rapid evolution in sequence and length of the nuclear-located gene for mitochondrial L2 ribosomal protein in cereals
    • Subramanian S, Bonen L. 2006. Rapid evolution in sequence and length of the nuclear-located gene for mitochondrial L2 ribosomal protein in cereals. Genome. 49:275-281.
    • (2006) Genome , vol.49 , pp. 275-281
    • Subramanian, S.1    Bonen, L.2
  • 53
    • 15044341867 scopus 로고    scopus 로고
    • The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: Comparative analysis of mitochondrial genomes in higher plants
    • Sugiyama Y, Watase Y, Nagase M, Makita N, Yagura S, Hirai A, Sugiura M. 2005. The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants. Mol Genet Genomics. 272:603-615.
    • (2005) Mol Genet Genomics , vol.272 , pp. 603-615
    • Sugiyama, Y.1    Watase, Y.2    Nagase, M.3    Makita, N.4    Yagura, S.5    Hirai, A.6    Sugiura, M.7
  • 54
    • 33847669179 scopus 로고    scopus 로고
    • The mitochondrial genome of the moss Physcomitrella patens sheds new light on mitochondrial evolution in land plants
    • Terasawa K, Odahara M, Kabeya Y, Kikugawa T, Sekine Y, Fujiwara M, Sato N. 2007. The mitochondrial genome of the moss Physcomitrella patens sheds new light on mitochondrial evolution in land plants. Mol Biol Evol. 24:699-709.
    • (2007) Mol Biol Evol , vol.24 , pp. 699-709
    • Terasawa, K.1    Odahara, M.2    Kabeya, Y.3    Kikugawa, T.4    Sekine, Y.5    Fujiwara, M.6    Sato, N.7
  • 56
    • 34548661941 scopus 로고    scopus 로고
    • Loss of the rpl32 gene from the chloroplast genome and subsequent acquisition of a preexisting transit peptide within the nuclear gene in Populus
    • Ueda M, Fujimoto M, Arimura S, Murata J, Tsutsumi N, Kadowaki K. 2007. Loss of the rpl32 gene from the chloroplast genome and subsequent acquisition of a preexisting transit peptide within the nuclear gene in Populus. Gene. 402:51-56.
    • (2007) Gene , vol.402 , pp. 51-56
    • Ueda, M.1    Fujimoto, M.2    Arimura, S.3    Murata, J.4    Tsutsumi, N.5    Kadowaki, K.6
  • 57
    • 49749125906 scopus 로고    scopus 로고
    • Presence of a latent mitochondrial targeting signal in gene on mitochondrial genome
    • Ueda M, Fujimoto M, Arimura S, Tsutsumi N, Kadowaki K. 2008. Presence of a latent mitochondrial targeting signal in gene on mitochondrial genome. Mol Biol Evol. 25:1791-1793.
    • (2008) Mol Biol Evol , vol.25 , pp. 1791-1793
    • Ueda, M.1    Fujimoto, M.2    Arimura, S.3    Tsutsumi, N.4    Kadowaki, K.5
  • 58
    • 0023462635 scopus 로고
    • Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs
    • Wolfe KH, Li WH, Sharp PM. 1987. Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proc Natl Acad Sci USA. 84:9054-9058.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 9054-9058
    • Wolfe, K.H.1    Li, W.H.2    Sharp, P.M.3
  • 59
    • 0025318864 scopus 로고
    • The 'effective number of codons' used in a gene
    • Wright F. 1990. The 'effective number of codons' used in a gene. Gene. 87:23-29.
    • (1990) Gene , vol.87 , pp. 23-29
    • Wright, F.1
  • 60
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci. 13:555-556.
    • (1997) Comput Appl Biosci , vol.13 , pp. 555-556
    • Yang, Z.1
  • 61
    • 0036270185 scopus 로고    scopus 로고
    • Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages
    • Yang Z, Nielson R. 2002. Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages. Mol Biol Evol. 19:908-917.
    • (2002) Mol Biol Evol , vol.19 , pp. 908-917
    • Yang, Z.1    Nielson, R.2
  • 62
    • 16344378246 scopus 로고    scopus 로고
    • Bayes empirical bayes inference of amino acid sites under positive selection
    • Yang Z, Wong WS, Nielsen R. 2005. Bayes empirical bayes inference of amino acid sites under positive selection. Mol Biol Evol. 22:1107-1118.
    • (2005) Mol Biol Evol , vol.22 , pp. 1107-1118
    • Yang, Z.1    Wong, W.S.2    Nielsen, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.