The genus Dietzia: A new home for some known and emerging opportunist pathogens

FEMS Immunology and Medical Microbiology

Volumn 55, Issue 3, 2009, Pages 296-305

  Koerner, Roland J ^a   Goodfellow, Michael ^b   Jones, Amanda L ^b  

^a SUNDERLAND ROYAL HOSPITAL   (United Kingdom)

^b NEWCASTLE UNIVERSITY   (United Kingdom)

Author keywords

Actinomycetes; Emerging pathogen; Genus Dietzia; Mycolic acids; Opportunistic pathogen

Indexed keywords

AZTREONAM; BIFONAZOLE; CIPROFLOXACIN; CLOTRIMAZOLE; ECONAZOLE; ERYTHROMYCIN; KETOCONAZOLE; MACROLIDE; MEZLOCILLIN; OXACILLIN; PEFLOXACIN; PENICILLIN G; PRISTINAMYCIN; SULFAMETHOXAZOLE; TEICOPLANIN; TETRACYCLINE; TETRACYCLINE DERIVATIVE; TICARCILLIN; VORICONAZOLE;

ACTINOBACTERIA; ANTIBIOTIC SENSITIVITY; BACTERIAL GROWTH; BACTERIUM COLONY; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CONFLUENT AND RETICULATED PAPILLOMATOSIS; DIETZIA; DIETZIA CINNAMEA; DIETZIA KUNJAMENSIS; DIETZIA MARIS; DIETZIA NATRONOLIMNAEA; DIETZIA PAPILLOMATOSIS; DIETZIA PSYCHRALCALIPHILA; HUMAN; MICROBIAL COMMUNITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PATHOGENICITY; PHENOTYPE; PRIORITY JOURNAL; PROSTHESIS INFECTION; RHODOCOCCUS; SEPTIC SHOCK; SHORT SURVEY; SPECIES DIFFERENTIATION; TAXONOMIC IDENTIFICATION;

ACTINOMYCETALES; ACTINOMYCETALES INFECTIONS; BACTERIAL TYPING TECHNIQUES; HUMANS; PHYLOGENY;

EID: 62149113232     PISSN: 09288244     EISSN: 1574695X     Source Type: Journal    
DOI: 10.1111/j.1574-695X.2008.00513.x     Document Type: Short Survey

References (60)

1. Adachi K, Katsuta S, Matsuda X et al 2007) Smaragdicoccus niigatensis gen. nov., sp. nov., a novel member of the suborder Corynebacterineae. Int J Syst Evol Micr 57 : 297 301.
2. Arenskötter M, Broker D Steinbüchel A (2004) Biology of the metabolically diverse genus Gordonia. Appl Environ Microb 70 : 3195 3204.
3. Azanza PV, Azanza RV, Vargas VM et al 2006) Bacterial endosymbionts of Pyrodinium bahamense var. compressum. Microb Ecol 52 : 756 764.
4. Bemer-Melchior P, Haloun A, Riegel P et al 1999) Bacteraemia due to Dietzia maris in an immunocompromised patient. Clin Infect Dis 29 : 1338 1340.
5. Bizet C, Barreau C, Harmant C et al 1997) Identification of Rhodococcus, Gordonia and Dietzia species using carbon source utilization tests ("Biotype-100" strips). Res Microbiol 148 : 799 809.
6. Borsodi AK, Micsinai A, Rusznyák P et al 2005) Diversity of alkaliphilic and alkalitolerance bacteria cultivated from decomposing reed rhizomes in a Hungarian Soda Lake. Microb Ecol 50 : 9 18.
7. Brito EMS, Guyoneaud R, Goňi-Urriza M et al 2006) Characterization of hydrocarbonoclastic bacterial communities from mangrove sediments in Guanabara Bay, Brazil. Res Microbiol 157 : 752 762.
8. Broadway NM, Dickinson FM Ratledge C (1993) The enzymology of dicarboxylic acid formation by Corynebacterium sp. strain 7E1C grown on n-alkanes. J Gen Microbiol 139 : 1337 1344.
9. Brown-Elliott BA, Brown JM, Conville PS Wallace RJ (2006) Clinical and laboratory features of the Nocardia spp. based on current molecular taxonomy. Clin Microbiol Rev 19 : 259 282.
10. Butler WR, Floyd MM, Brown JM et al 2005) Novel mycolic acid-containing bacteria in the family Segniliparaceae fam. nov., including the genus Segniliparus gen. nov., with descriptions of Segniliparus rotundus sp. nov. and Segniliparus rugosus sp. nov. Int J Syst Evol Micr 55 : 1615 1624.
11. Chun J, Kang OS Goodfellow M (1996) Phylogeny of mycolic acid containing actinomycetes. J Ind Microbiol 17 : 205 213.
12. ÇiftÇioglu N, Altintaş K Habera M (1996) A case of human orotracheal myiasis caused by Wohlfahrtia magnifica. Parasitol Res 83 : 34 36.
13. Colquhoun JA, Mexson J, Goodfellow M et al 1998) Novel rhodococci and other mycolate actinomycetes from the deep sea. Antonie Van Leeuwenhoek 74 : 27 40.
14. Colston MI (1996) The cellular and molecular basis of immunity against mycobacterial diseases. J Appl Bacteriol Symp Suppl 81 : 33S 39S.
15. Dabbs ER, Naidoo S, Lephoto C Nikitina N (2003) Pathogenic Nocardia, Rhodococcus, and related organisms are highly susceptible to imidazole antifungals. Antimicrob Agents Ch 47 : 1476 1478.
16. Dobson G, Minnikin DE, Minnikin SM, Parlett JH, Goodfellow M, Ridell M Magnusson M (1985) Systematic analysis of complex mycobacterial lipids. Chemical Methods in Bacterial Systematics (Goodfellow M, ed), pp. 237 265. Academic Press, London.
17. Duckworth AW, Grant S Grant WD (1998) Dietzia natronolimnaios sp. nov., a new member of the genus Dietzia isolated from an East African soda lake. Extremophiles 2 : 359 366.
18. Elias PM, Williams ML Rehfeld SJ (1990) N-alkanes in the skin: function or fancy? Arch Dermatol 126 : 868 870.
19. Gao Z, Tseng CH, Pei Z Blaser MJ (2007) Molecular analysis of human forearm superficial skin bacterial biota. P Natl A Sci 104 : 2927 2932.
20. Goodfellow M Maldonado LA (2006) The families Dietzieaceae, Gordoniaceae, Nocardiaceae and Tsukamurellaceae. The Prokaryotes, 3rd edn, Vol. 3, Archaea and Bacteria. Fimacutes, Actinomycetes (Dworkin M, Falkow S, Schleifer KH Stackebrandt E, eds), pp. 343 388. Springer Verlag, New York.
21. Goodfellow M, Alderson G Chun J (1998) Rhodococcal systematics: problems and developments. Antonie Van Leeuwenhoek 74 : 3 20.
22. Goodfellow M, Isik K Yates E (1999) Actinomycete systematics: an unfinished synthesis. Nova Acta Leopoldina 80 : 47 82.
23. Harrison FC (1929) The discoloration of halibut. Canad J Res 1 : 214 239.
24. Hunter SW, Gaylord H Brennan PJ (1986) Structure and antigenicity of the phosphorylated lipopolysaccharide antigens from the leprosy and tubercle bacilli. J Biol Chem 261 : 12345 12351.
25. Jones AL, Koerner RJ, Natarajan S et al 2008) Dietzia papillomatosis sp. nov., a novel actinomycete isolated from the skin of an immunocompetent patient with confluent and reticulated papillomatosis. Int J Syst Evol Micr 58 : 68 72.
26. Kämpfer P, Anderson MA, Rainey FA et al 1999) Williamsia muralis gen. nov., sp. nov., isolated from the indoor environment of a childrens day care centre. Int J Syst Evol Micr 49 : 681 687.
27. Kleinsteuber S, Riss V Fetzer I (2006) Population dynamics within a microbial consortium during growth on diesel fuel in saline environments. Appl Environ Microb 72 : 3531 3542.
28. Küster W, Melnik B Plewig G (1991) N-Alkanes in the skin. Arch Dermatol 127 : 1727 1728.
29. Lechevalier MP, De Biérre C Lechevalier H (1977) Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem Syst Ecol 5 : 249 260.
30. Li J, Zhao G-Z, Zhang Y-Q et al 2008) Dietzia schima sp. nov. and Dietzia cercidiphylla sp. nov., from surface-sterilized plant tissues. Int J Syst Evol Micr 58 : 2549 2554.
31. Mayilraj S, Suresh K, Kroppenstedt RM et al 2006) Dietzia kunjamensis sp. nov., isolated from the Indian Himalayas. Int J Syst Evol Micr 56 : 1667 1671.
32. McNeil MM Brown JM (1994) The medically important aerobic actinomycetes: epidemiology and microbiology. Clin Microbiol Rev 7 : 357 417.
33. Minnikin DE, Alshamaony L Goodfellow M (1975) Differentiation of Mycobacterium, Nocardia and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates. J Gen Microbiol 88 : 200 204.
34. Minnikin DE, Hutchinson IG, Caldicott AB Goodfellow M (1980) Thin layer chromatography of methanolysates of mycolic acid-containing bacteria. J Chromatogr 188 : 221 233.
35. Natarajan S, Milne D, Jones AL et al 2005) Dietzia strain X: a newly described actinomycete isolated from confluent and reticulated papillomatosis. Brit J Dermatol 153 : 825 827.
36. Nesterenko OA, Nogina TM, Kasumova SA, Kvasnikov EI et al 1982) Rhodococcus luteus nom. nov. and Rhodococcus maris nom. nov. Int J Syst Bacteriol 32 : 1 14.
37. Nishiuchi Y, Tuneko B Yano I (2000) Mycolic acids from Rhodococcus, Gordonia and Dietzia. J Microbiol Meth 40 : 1 9.
38. Passos MRL, Varella RQ Tavares Rogério R (2002) Vulvar myiasis during pregnancy. Infect Dis Obstet Gynecol 10 : 153 158.
39. Pidoux O, Argenson JN, Jacomo V et al 2001) Molecular identification of a Dietzia maris hip prosthesis infection isolate. J Clin Microbiol 39 : 2634 2636.
40. Rainey S, Klatte S Kroppenstedt RM (1995) Dietzia, a new genus including Dietzia maris comb. nov., formerly Rhodococcus maris. Int J Syst Bacteriol 45 : 32 36.
41. Reyes G, Navarro JL, Gamallo C et al 2006) Type A aortic dissection associated with Dietzia maris. Interact Cardio Vasc Thorac Surg 5 : 666 668.
42. Rhoades E Ullrich HJ (2000) How to establish a lasting relationship with your host: lessons learned from Mycobacterium spp. Immunol Cell Biol 78 : 301 311.
43. Saitou N Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4 : 406 425.
44. Scheinfeld N (2006) Confluent and reticulated papillomatosis. Am J Clin Dermatol 7 : 305 313.
45. Sette LD, Simioni KCM, Vasconcellos SP et al 2007) Analysis of the composition of bacterial communities in oil reservoirs from a southern offshore Brazilian basin. Antonie Van Leeuwenhoek 91 : 253 266.
46. Soddell JA, Stainsby FM, Eales KL et al 2006) Millisia brevis gen. nov., sp. nov., an actinomycete isolated from activated sludge foam. Int J Syst Evol Micr 56 : 739 744.
47. Sogimori D, Dake T Nakamura S (2000) Microbial degradation of disodium terephthalate by alkaliphilic Dietzia sp. strain GS-1. Biosci Biotech Bioch 64 : 2709 2711.
48. Stackebrandt E, Rainey FA Ward-Rainey NL (1997) Proposal for a new hierarchic classification system, Actinobacteria classis nov. Int J Syst Bacteriol 47 : 479 491.
49. Sutcliffe IC (2000) Characterisation of a lipomannan lipoglycan from the mycolic acid containing actinomycete Dietzia maris. Antonie Van Leeuwenhoek 78 : 195 201.
50. Takami H, Inoue A, Fuji F Horikoshi K (1997) Microbial flora in the deepest sea mud of the Mariana Trench. FEMS Microbiol Lett 152 : 279 285.
51. Takeishi H, Anzai H Urai M (2006) Xylanolytic and alkaliphilic Dietzia sp. isolated from larvae of the japanese horned beetle, Trypoxylus dichotomus. Actinomycetologica 20 : 49 54.
52. Tauch A, Kaiser O, Hain T et al 2005) Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora. J Bacteriol 187 : 4671 4682.
53. Tiago I, Chung AP Verssimo A (2004) Bacterial diversity in a nonsaline alkaline environment: heterotrophic aerobic populations. Appl Environ Microb 70 : 7378 7387.
54. Tóth EM, Hell E, Kovács G et al 2006) Bacteria isolated from the different developmental stages and larval organs of the obligate parasitic fly, Wohlfahrtia magnifica (Diptera: Sarcophagidae). Microb Ecol 51 : 13 21.
55. Von der Weid I, Marques JM, Cunha CD et al 2007) Identification and biodegradation potential of a novel strain of Dietzia cinnamea isolated from a petroleum-contaminated tropical soil. Syst Appl Microbiol 30 : 331 339.
56. Xu J, Saunders CW, Hu P et al 2007) Dandruff-associated Malassezia genomes reveal convergent and divergent virulence traits shared with plant and human fungal pathogens. P Natl A Sci 104 : 18730 18735.
57. Yamamura H, Lisdijanti P, Ridwan R et al 2009) Dietzia timorensis sp. nov., isolated from soil in Indonesia. Int J Syst Evol Micr, in press.
58. Yassin AF, Hupfer H Schaal KP (2006) Dietzia cinnamea sp. nov., a novel species isolated from a perianal swab of a patient with a bone marrow transplant. Int J Syst Evol Micr 56 : 641 645.
59. Yumoto I, Nakamura A, Iwata H et al 2002) Dietzia psychralcaliphila sp. nov., a novel, facultatively psychrophilic alkaliphile that grows on hydrocarbons. Int J Syst Evol Micr 52 : 85 90.
60. Zvyagintseva IS, Poglazova MN, Gotoeva MT Belyaev SS (2001) Effect on the medium salinity on oil degradation by nocardioform bacteria. Microbiology 70 : 759 764.