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Volumn , Issue , 2009, Pages 203-214

Identifying dynamic network modules with temporal and spatial constraints

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL DATA; BIOLOGICAL NETWORKS; CELLULAR ACTIVITIES; CELLULAR SYSTEM; CONNECTED COMPONENT; DYNAMIC MODULES; DYNAMIC NATURE; DYNAMIC NETWORK; EXPRESSION PROFILE; GENE EXPRESSION PROFILING; MINING ALGORITHMS; MODEL SYSTEM; MOLECULAR EVENTS; PROTEIN-PROTEIN INTERACTION NETWORKS; SEQUENTIAL ORDERING; SPATIAL CONSTRAINTS; TEMPORAL DOMAIN; TEMPORAL NETWORKS; TIME-SERIES DATA;

EID: 61949358848     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper
Times cited : (29)

References (25)
  • 1
    • 0034954376 scopus 로고    scopus 로고
    • Aligning gene expression time series with time warping algorithms
    • J Aach and G M Church. Aligning gene expression time series with time warping algorithms. Bioinformatics, 17(6):495-508, Jun 2001. Comparative StUdy. (Pubitemid 32600496)
    • (2001) Bioinformatics , vol.17 , Issue.6 , pp. 495-508
    • Aach, J.1    Church, G.M.2
  • 2
    • 0038074373 scopus 로고    scopus 로고
    • Topological structure analysis of the protein-protein interaction network in budding yeast
    • DOI 10.1093/nar/gkg340
    • Dongbo Bu, Yi Zhao, Lun Cai, Hong Xue, Xiaopeng Zhu, Hongchao Lu, Jingfen Zhang, Shiwei Sun, Lunjiang Ling, Nan Zhang, Ouojie Li, and Runsheng Chen. Topological structure analysis of the protein-protein interaction network in budding yeast. Nucleic Acids Res, 31(9):2443-2450, May 2003. Comparative Study. (Pubitemid 37442113)
    • (2003) Nucleic Acids Research , vol.31 , Issue.9 , pp. 2443-2450
    • Bu, D.1    Zhao, Y.2    Cai, L.3    Xue, H.4    Zhu, X.5    Lu, H.6    Zhang, J.7    Sun, S.8    Ling, L.9    Zhang, N.10    Li, G.11    Chen, R.12
  • 3
    • 13244284551 scopus 로고    scopus 로고
    • Dynamic complex formation during the yeast cell cycle
    • DOI 10.1126/science.1105103
    • Ulrik de Lichtenberg, Lars Juhl Jensen, Soren Brunak, and Peer Bork. Dynamic complex formation during the yeast cell cycle. Science, 307(5710):724-727, Feb 2005 (Pubitemid 40194642)
    • (2005) Science , vol.307 , Issue.5710 , pp. 724-727
    • De Lichtenberg, U.1    Jensen, L.J.2    Brunak, S.3    Bork, P.4
  • 4
    • 67049085010 scopus 로고    scopus 로고
    • Mining temporally evolving graphs
    • Prasanna Desikan and Jaideep Srivastava. Mining temporally evolving graphs. In WebKDD, 2004.
    • (2004) WebKDD
    • Desikan, P.1    Srivastava, J.2
  • 5
    • 0028818254 scopus 로고
    • Yeast Numlp associates with the mother cell cortex during S/02 phase and affects microtubular functions
    • Nov
    • M Farkasovsky and H Kuntzel' Yeast Numlp associates with the mother cell cortex during S/02 phase and affects microtubular functions. J Cell Bioi, 131(4):1003-1014, Nov 1995.
    • (1995) J Cell Bioi , vol.131 , Issue.4 , pp. 1003-1014
    • Farkasovsky, M.1    Kuntzel, H.2
  • 6
    • 0035931754 scopus 로고    scopus 로고
    • Cortical Num1p interacts with the dynein intermediate chain Pac11p and cytoplasmic microtubules in budding yeast
    • DOI 10.1083/jcb.152.2.251
    • M Farkasovsky and H Kuntzel' Cortical Num1p interacts with the dynein intermediate chain Pacllp and cytoplasmic microtubules in budding yeast. J Cell Bioi, 152(2):251- 262, Jan 2001. (Pubitemid 34285596)
    • (2001) Journal of Cell Biology , vol.152 , Issue.2 , pp. 251-262
    • Farkasovsky, M.1    Kuntzel, H.2
  • 7
    • 0033764169 scopus 로고    scopus 로고
    • The small world of metabolism
    • Nov
    • D A Fell and A Wagner. The small world of metabolism. Nat Biotechnol, 18(11):1121- 1122, Nov 2000.
    • (2000) Nat Biotechnol , vol.18 , Issue.11 , pp. 1121-1122
    • Fell, D.A.1    Wagner, A.2
  • 8
    • 0036578654 scopus 로고    scopus 로고
    • Topological and causal structure of the yeast transcriptional regulatory network
    • May
    • N abil Guelzim, Samuele Bottani, Paul Bourgine, and Francois Kepes. Topological and causal structure of the yeast transcriptional regulatory network. Nat Genet, 31(1):60- 63, May 2002.
    • (2002) Nat Genet , vol.31 , Issue.1 , pp. 60-63
    • Abil Guelzim, N.1    Bottani, S.2    Bourgine, P.3    Kepes, F.4
  • 12
    • 4644326931 scopus 로고    scopus 로고
    • Genomic analysis of regulatory network dynamics reveals large topological changes
    • DOI 10.1038/nature02782
    • Nicholas M Luscombe, M Madan Babu, Haiyuan Yu, Michael Snyder, Sarah A Teichmann, and Mark Gerstein. Genomic analysis of regulatory network dynamics reveals large topological changes. Nature, 431(7006):308-312, Sep 2004. (Pubitemid 39265665)
    • (2004) Nature , vol.431 , Issue.7006 , pp. 308-312
    • Luscombe, N.M.1    Babu, M.M.2    Yu, H.3    Snyder, M.4    Teichmann, S.A.5    Gerstein, M.6
  • 13
    • 0034810261 scopus 로고    scopus 로고
    • A conserved protein, Nuf2, is implicated in connecting the centromere to the spindle during chromosome segregation: A link between the kinetochore function and the spindle checkpoint
    • A Nabetani, T Koujin, C Tsutsumi, T Haraguchi, and Y Hiraoka. A conserved protein, Nuf2, is implicated in connecting the centromere to the spindle during chromosome segregation: a link between the kinetochore function and the spindle checkpoint. Chromosoma, 110(5):322-334, Sep 2001. (Pubitemid 32926898)
    • (2001) Chromosoma , vol.110 , Issue.5 , pp. 322-334
    • Nabetani, A.1    Koujin, T.2    Tsutsumi, C.3    Haraguchi, T.4    Hiraoka, Y.5
  • 14
    • 34247527717 scopus 로고    scopus 로고
    • Prediction and ranking algorithms for event-based network data
    • Joshua O'Madadhain, Jon Hutchins, and Padhraic Smyth. Prediction and ranking algorithms for event-based network data. SIGKDD Explorations, 7(2):23-30, 2005.
    • (2005) SIGKDD Explorations , vol.7 , Issue.2 , pp. 23-30
    • O'Madadhain, J.1    Hutchins, J.2    Smyth, P.3
  • 15
    • 0034020583 scopus 로고    scopus 로고
    • Global properties of the metabolic map of Escherichia coli
    • DOI 10.1101/gr.10.4.568
    • Christos A. Ouzounis and Peter D. Karp. Global Properties of the Metabolic Map of Escherichia coli. Ger.ome Res., 10(4):568-576, 2000. (Pubitemid 30259088)
    • (2000) Genome Research , vol.10 , Issue.4 , pp. 568-576
    • Ouzounis, C.A.1    Karp, P.D.2
  • 16
    • 1542316919 scopus 로고    scopus 로고
    • Control of yeast filamentous-form growth by modules in an integrated molecular network
    • DOI 10.1101/gr.2020604
    • Susanne Prinz, Iliana Avila-Campillo, Christine Aldridge, Ajitha Srinivasan, Krassen Dirnitrov, Andrew F Siegel, and Timothy Galitski. Control of yeast filamentous-form growth by modules in an integrated molecular network. Genome Res, 14(3):380-390, Mar 2004. Comparative Study. (Pubitemid 38380395)
    • (2004) Genome Research , vol.14 , Issue.3 , pp. 380-390
    • Prinz, S.1    Avila-Campillo, I.2    Aldridge, C.3    Srinivasan, A.4    Dimitrov, K.5    Siegel, A.F.6    Galitski, T.7
  • 18
    • 33749824905 scopus 로고    scopus 로고
    • Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors
    • DOI 10.1093/bioinformatics/btl417
    • Quansong Ruan, Debojyoti Dutta, Michael S Schwalbach, Joshua A Steele, Jed A Fuhrman, and Fengzhu Sun. Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors. Bioinformatics, 22(20):2532-2538, Oct 2006. (Pubitemid 44560760)
    • (2006) Bioinformatics , vol.22 , Issue.20 , pp. 2532-2538
    • Ruan, Q.1    Dutta, D.2    Schwalbach, M.S.3    Steele, J.A.4    Fuhrman, J.A.5    Sun, F.6
  • 24
    • 33644894727 scopus 로고    scopus 로고
    • Analysis of kinesin motor function at budding yeast kinetochores
    • Mar
    • Jessica D Tytell and Peter K Sorger. Analysis of kinesin motor function at budding yeast kinetochores. J Cell Bioi, 172(6):861-874, Mar 2006.
    • (2006) J Cell Bioi , vol.172 , Issue.6 , pp. 861-874
    • Tytell, J.D.1    Sorger, P.K.2
  • 25
    • 0037161731 scopus 로고    scopus 로고
    • Comparative assessment of large-scale data sets of protein-protein interactions
    • Christian von Mering, Roland Krause, Berend Snel, Michael Cornell, Stephen G Oliver, Stanley Fields, and Peer Bork. Comparative assessment of large-scale data sets of protein-protein interactions. Nature, 417(6887):399-403, May 2002. Comparative StUdy. (Pubitemid 34563526)
    • (2002) Nature , vol.417 , Issue.6887 , pp. 399-403
    • Von Mering, C.1    Krause, R.2    Snel, B.3    Cornell, M.4    Oliver, S.G.5    Fields, S.6    Bork, P.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.