메뉴 건너뛰기




Volumn 18, Issue 6, 2009, Pages 1171-1180

Evaluation of imputation-based association in and around the integrin-α-M (ITGAM) gene and replication of robust association between a non-synonymous functional variant within ITGAM and systemic lupus erythematosus (SLE)

(28)  Han, Shizhong a   Kim Howard, Xana a   Deshmukh, Harshal a   Kamatani, Yoichiro b   Viswanathan, Parvathi a   Guthridge, Joel M a   Thomas, Kenaz a   Kaufman, Kenneth M a,c   Ojwang, Joshua a   Rojas Villarraga, Adriana d   Baca, Vicente e   Orozco, Lorena f   Rhodes, Benjamin g   Choi, Chan Bum h   Gregersen, Peter K i   Merrill, Joan T a   James, Judith A a,j   Gaffney, Patrick M a   Moser, Kathy L a   Jacob, Chaim O k   more..


Author keywords

[No Author keywords available]

Indexed keywords

ALPHA INTEGRIN; ALPHA M INTEGRIN; ALPHA X INTEGRIN; GENE PRODUCT; INTEGRIN; PROTEIN TRIM2; UNCLASSIFIED DRUG;

EID: 61849093275     PISSN: 09646906     EISSN: 14602083     Source Type: Journal    
DOI: 10.1093/hmg/ddp007     Document Type: Article
Times cited : (99)

References (31)
  • 1
    • 33744822178 scopus 로고    scopus 로고
    • Epidemiology of systemic lupus erythematosus: A comparison of worldwide disease burden
    • Danchenko, N., Satia, J.A. and Anthony, M.S. (2006) Epidemiology of systemic lupus erythematosus: A comparison of worldwide disease burden. Lupus, 15, 308-318.
    • (2006) Lupus , vol.15 , pp. 308-318
    • Danchenko, N.1    Satia, J.A.2    Anthony, M.S.3
  • 2
    • 17244373451 scopus 로고    scopus 로고
    • Alarco'n-Segovia, D., Alarco'n-Riquelme, M.E., Cardiel, M.H., Caeiro, F., Massardo, L., Villa, A.R. and Pons-Estel, B.A.Grupo Latinoamericano de Estudio del Lupus Eritematoso (GLADEL) (2005) Familial aggregation of systemic lupus erythematosus, rheumatoid arthritis, and other autoimmune diseases in 1,177 lupus patients from the GLADEL cohort. Arthritis Rheum., 52, 1138-1147.
    • Alarco'n-Segovia, D., Alarco'n-Riquelme, M.E., Cardiel, M.H., Caeiro, F., Massardo, L., Villa, A.R. and Pons-Estel, B.A.Grupo Latinoamericano de Estudio del Lupus Eritematoso (GLADEL) (2005) Familial aggregation of systemic lupus erythematosus, rheumatoid arthritis, and other autoimmune diseases in 1,177 lupus patients from the GLADEL cohort. Arthritis Rheum., 52, 1138-1147.
  • 5
    • 38649125210 scopus 로고    scopus 로고
    • Harley, J.B., Alarcón-Riquelme, M.E., Criswell, L.A., Jacob, C.O., Kimberly, R.P., Moser, K.L., Tsao, B.P., Vyse, T.J. and Langefeld, C.D.International Consortium for Systemic Lupus Erythematosus Genetics (SLEGEN) (2008) Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci. Nat. Genet., 40, 204-210.
    • Harley, J.B., Alarcón-Riquelme, M.E., Criswell, L.A., Jacob, C.O., Kimberly, R.P., Moser, K.L., Tsao, B.P., Vyse, T.J. and Langefeld, C.D.International Consortium for Systemic Lupus Erythematosus Genetics (SLEGEN) (2008) Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci. Nat. Genet., 40, 204-210.
  • 10
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard, J.K., Stephens, M. and Donnelly, P. (2000) Inference of population structure using multilocus genotype data. Genetics, 155, 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 11
    • 34547622688 scopus 로고    scopus 로고
    • Imputation-based analysis of association studies: Candidate regions and quantitative traits
    • doi:10.1371/journal.pgen.0030114
    • Servin, B. and Stephens, M. (2007) Imputation-based analysis of association studies: Candidate regions and quantitative traits. PLoS Genet., 3, e114, doi:10.1371/journal.pgen.0030114.
    • (2007) PLoS Genet , vol.3
    • Servin, B.1    Stephens, M.2
  • 12
    • 34347344976 scopus 로고    scopus 로고
    • A new multipoint method for genome-wide association studies via imputation of genotypes
    • Marchini, J., Howie, B., Myers, S., McVean, G. and Donnelly, P. (2007) A new multipoint method for genome-wide association studies via imputation of genotypes. Nat. Genet., 39, 906-913.
    • (2007) Nat. Genet , vol.39 , pp. 906-913
    • Marchini, J.1    Howie, B.2    Myers, S.3    McVean, G.4    Donnelly, P.5
  • 13
    • 84969213492 scopus 로고    scopus 로고
    • Genomewide association study of 14,000 cases of seven common diseases and 3,000 shared controls
    • The Wellcome Trust Case Control Consortium
    • The Wellcome Trust Case Control Consortium. (2007) Genomewide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature, 447, 661-678.
    • (2007) Nature , vol.447 , pp. 661-678
  • 14
    • 33644974019 scopus 로고    scopus 로고
    • A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase
    • Scheet, P. and Stephens, M. (2006) A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase. Am. J. Hum. Genet., 78 629-644.
    • (2006) Am. J. Hum. Genet , vol.78 , pp. 629-644
    • Scheet, P.1    Stephens, M.2
  • 15
    • 18144415857 scopus 로고    scopus 로고
    • Integrating case-control and TDT studies
    • Kazeem, G.R. and Farrall, M. (2005) Integrating case-control and TDT studies. Ann. Hum. Genet., 69, 329-335.
    • (2005) Ann. Hum. Genet , vol.69 , pp. 329-335
    • Kazeem, G.R.1    Farrall, M.2
  • 16
    • 42049106461 scopus 로고    scopus 로고
    • Catmap: Case-control and TDT meta-analysis package
    • Nicodemus, K.K. (2008) Catmap: Case-control and TDT meta-analysis package. BMC Bioinformatics, 9, 130.
    • (2008) BMC Bioinformatics , vol.9 , pp. 130
    • Nicodemus, K.K.1
  • 17
    • 0029741063 scopus 로고    scopus 로고
    • The future of genetic studies of complex human diseases
    • Risch, N. and Merikangas, K. (1996) The future of genetic studies of complex human diseases. Science, 273, 1516-1517.
    • (1996) Science , vol.273 , pp. 1516-1517
    • Risch, N.1    Merikangas, K.2
  • 18
    • 0043123123 scopus 로고    scopus 로고
    • Tcoffeeιgs: A web server for computing, evaluating and combining multiple sequence alignments
    • Poirot, O., O'Toole, E. and Notredame, C. (2003) Tcoffeeιgs: A web server for computing, evaluating and combining multiple sequence alignments. Nucleic Acids Res., 31, 3503-3506.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3503-3506
    • Poirot, O.1    O'Toole, E.2    Notredame, C.3
  • 20
    • 33751198499 scopus 로고    scopus 로고
    • α-Chain phosphorylation of the human leukocyte CD11b/ CD18 (Mac-1) integrin is pivotal for integrin activation to bind ICAMs and leukocyte extravasation
    • Fagerholm, S.C., Varis, M., Stefanidakis, M., Hilden, T.J. and Gahmberg, C.J. (2006) α-Chain phosphorylation of the human leukocyte CD11b/ CD18 (Mac-1) integrin is pivotal for integrin activation to bind ICAMs and leukocyte extravasation. Blood, 108, 3379-3386.
    • (2006) Blood , vol.108 , pp. 3379-3386
    • Fagerholm, S.C.1    Varis, M.2    Stefanidakis, M.3    Hilden, T.J.4    Gahmberg, C.J.5
  • 22
    • 3242814637 scopus 로고    scopus 로고
    • Human alloantibody anti-Mart interferes with Mac1-dependent leukocyte adhesion
    • Sachs, U.J.H., Chavakis, T., Fung, L., Lohrenz, A., Bux, J., Reil, A., Ruf, A. and Santoso, S. (2004) Human alloantibody anti-Mart interferes with Mac1-dependent leukocyte adhesion. Blood, 104, 727-734.
    • (2004) Blood , vol.104 , pp. 727-734
    • Sachs, U.J.H.1    Chavakis, T.2    Fung, L.3    Lohrenz, A.4    Bux, J.5    Reil, A.6    Ruf, A.7    Santoso, S.8
  • 24
    • 58149175796 scopus 로고    scopus 로고
    • Guan, Y. and Stephens, M. (2008) Practical issues in imputation-based association mapping. PLoS Genet., 4, e1000279, doi:10.1371/ journal. pgen.1000279.
    • Guan, Y. and Stephens, M. (2008) Practical issues in imputation-based association mapping. PLoS Genet., 4, e1000279, doi:10.1371/ journal. pgen.1000279.
  • 25
    • 24944532201 scopus 로고    scopus 로고
    • Equivalence of prospective and retrospective models in the bayesian analysis of case-control studies
    • Seaman, S.R. and Richardson, S. (2004) Equivalence of prospective and retrospective models in the bayesian analysis of case-control studies. Biometrika, 91, 15-25.
    • (2004) Biometrika , vol.91 , pp. 15-25
    • Seaman, S.R.1    Richardson, S.2
  • 27
    • 0031229830 scopus 로고    scopus 로고
    • Updating the American College of Rheumatology revised criteria for the classification of systemic lupus erythematosus
    • Hochberg, M.C. (1997) Updating the American College of Rheumatology revised criteria for the classification of systemic lupus erythematosus. Arthritis Rheum., 40, 1725.
    • (1997) Arthritis Rheum , vol.40 , pp. 1725
    • Hochberg, M.C.1
  • 30
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: Analysis and visualization of LD and haplotype maps
    • Barrett, F. and Maller, D. (2005) Haploview: Analysis and visualization of LD and haplotype maps. Bioinformatics, 21, 263-265.
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, F.1    Maller, D.2
  • 31
    • 33846653970 scopus 로고    scopus 로고
    • WHAP: Haplotype-based association analysis
    • Purcell, S., Daly, M.J. and Sham, P.C. (2007) WHAP: Haplotype-based association analysis. Bioinformatics, 23, 255-256.
    • (2007) Bioinformatics , vol.23 , pp. 255-256
    • Purcell, S.1    Daly, M.J.2    Sham, P.C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.