메뉴 건너뛰기




Volumn 60, Issue 12, 2008, Pages 759-765

MHC motif viewer

Author keywords

Class I; Class II; HLA; MHC; Motifs; Viewer

Indexed keywords

EPITOPE; HISTOCOMPATIBILITY ANTIGEN; HLA ANTIGEN; HLA D ANTIGEN; PEPTIDE;

EID: 61449514317     PISSN: 00937711     EISSN: 14321211     Source Type: Journal    
DOI: 10.1007/s00251-008-0330-2     Document Type: Article
Times cited : (56)

References (21)
  • 1
  • 3
    • 0025855156 scopus 로고
    • Allele-specific motifs revealed by sequencing of self-peptides eluted from MHC molecules
    • Falk K, Rotzschke O, Stevanovic S, Jung G, Rammensee HG (1991) Allele-specific motifs revealed by sequencing of self-peptides eluted from MHC molecules. Nature 351:290-296. doi:10.1038/351290a0 (Pubitemid 21896578)
    • (1991) Nature , vol.351 , Issue.6324 , pp. 290-296
    • Falk, K.1    Rotzschke, O.2    Stevanovic, S.3    Jung, G.4    Rammensee, H.-G.5
  • 5
    • 49849093639 scopus 로고    scopus 로고
    • Humans with chimpanzee-like major histocompatibility complex- specificities control HIV-1 infection
    • Hoof I, Kesmir C, Lund O, Nielsen M (2008) Humans with chimpanzee-like major histocompatibility complex-specificities control HIV-1 infection. AIDS 22:1299-1303
    • (2008) AIDS , vol.22 , pp. 1299-1303
    • Hoof, I.1    Kesmir, C.2    Lund, O.3    Nielsen, M.4
  • 6
    • 38849139819 scopus 로고    scopus 로고
    • Efficient peptide-MHC-I binding prediction for alleles with few known binders
    • DOI 10.1093/bioinformatics/btm611
    • Jacob L, Vert JP (2008) Efficient peptide-MHC-I binding prediction for alleles with few known binders. Bioinformatics 24:358-366. doi:10.1093/ bioinformatics/btm611 (Pubitemid 351189011)
    • (2008) Bioinformatics , vol.24 , Issue.3 , pp. 358-366
    • Jacob, L.1    Vert, J.-P.2
  • 9
    • 0037407113 scopus 로고    scopus 로고
    • Reliable prediction of T-cell epitopes using neural networks with novel sequence representations
    • DOI 10.1110/ps.0239403
    • Nielsen M, Lundegaard C, Worning P, Lauemoller SL, Lamberth K, Buus S et al (2003) Reliable prediction of T-cell epitopes using neural networks with novel sequence representations. Protein Sci 12:1007-1017. doi:10.1110/ps.0239403 (Pubitemid 36505435)
    • (2003) Protein Science , vol.12 , Issue.5 , pp. 1007-1017
    • Nielsen, M.1    Lundegaard, C.2    Worning, P.3    Lauemoller, S.L.4    Lamberth, K.5    Buus, S.6    Brunak, S.7    Lund, O.8
  • 10
    • 2442499729 scopus 로고    scopus 로고
    • Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach
    • DOI 10.1093/bioinformatics/bth100
    • Nielsen M, Lundegaard C, Worning P, Hvid CS, Lamberth K, Buus S et al (2004) Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach. Bioinformatics 20:1388-1397. doi:10.1093/ bioinformatics/bth100 (Pubitemid 38937025)
    • (2004) Bioinformatics , vol.20 , Issue.9 , pp. 1388-1397
    • Nielsen, M.1    Lundegaard, C.2    Worning, P.3    Sylvester, H.C.4    Lamberth, K.5    Buus, S.6    Brunak, S.7    Lund, O.8
  • 11
    • 39549084433 scopus 로고    scopus 로고
    • NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence
    • doi:10.1371/journal.pone.0000796
    • Nielsen M, Lundegaard C, Blicher T, Lamberth K, Harndahl M, Justesen S et al (2007) NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence. PLoS One 2:796. doi:10.1371/journal.pone.0000796
    • (2007) PLoS One , vol.2 , pp. 796
    • Nielsen, M.1    Lundegaard, C.2    Blicher, T.3    Lamberth, K.4    Harndahl, M.5    Justesen, S.6
  • 12
    • 48249083459 scopus 로고    scopus 로고
    • Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: NetMHCIIpan
    • Nielsen M, Lundegaard C, Blicher T, Peters B, Sette A, Justesen S et al (2008) Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: NetMHCIIpan. PLOS Comput Biol 4(7):e1000107
    • (2008) PLOS Comput Biol , vol.4 , Issue.7
    • Nielsen, M.1    Lundegaard, C.2    Blicher, T.3    Peters, B.4    Sette, A.5    Justesen, S.6
  • 14
    • 0035161548 scopus 로고    scopus 로고
    • IMGT/HLA Database - A sequence database for the human major histocompatibility complex
    • Robinson J, Waller MJ, Parham P, Bodmer JG, Marsh SGE (2001) IMGT/HLA Database - a sequence database for the human major histocompatibility complex. Nucleic Acids Res 29:210-213. doi:10.1093/nar/29.1.210 (Pubitemid 32054450)
    • (2001) Nucleic Acids Research , vol.29 , Issue.1 , pp. 210-213
    • Robinson, J.1    Waller, M.J.2    Parham, P.3    Bodmer, J.G.4    Marsh, S.G.E.5
  • 15
    • 0025008168 scopus 로고
    • Sequence logos: A new way to display consensus sequences
    • doi:10.1093/nar/18.20.6097
    • Schneider TD, Stephens RM (1990) Sequence logos: a new way to display consensus sequences. Nucleic Acids Res 18:6097-6100. doi:10.1093/nar/18.20.6097
    • (1990) Nucleic Acids Res , vol.18 , pp. 6097-6100
    • Schneider, T.D.1    Stephens, R.M.2
  • 16
    • 0033388724 scopus 로고    scopus 로고
    • Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism
    • Sette A, Sidney J (1999) Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism. Immunogenetics 50:201-212. doi:10.1007/s002510050594 (Pubitemid 30099525)
    • (1999) Immunogenetics , vol.50 , Issue.3-4 , pp. 201-212
    • Sette, A.1    Sidney, J.2
  • 17
    • 13844281356 scopus 로고    scopus 로고
    • A roadmap for the immunomics of category A-C pathogens
    • DOI 10.1016/j.immuni.2005.01.009
    • Sette A, Fleri W, Peters B, Sathiamurthy M, Bui HH, Wilson S (2005a) A roadmap for the immunomics of category A-C pathogens. Immunity 22:155-161. doi:10.1016/j.immuni.2005.01.009 (Pubitemid 40255707)
    • (2005) Immunity , vol.22 , Issue.2 , pp. 155-161
    • Sette, A.1    Fleri, W.2    Peters, B.3    Sathiamurthy, M.4    Bui, H.-H.5    Wilson, S.6
  • 18
    • 17944382046 scopus 로고    scopus 로고
    • Characterization of the peptide-binding specificity of Mamu-A*11 results in the identification of SIV-derived epitopes and interspecies cross-reactivity
    • DOI 10.1007/s00251-004-0749-z
    • Sette A, Sidney J, Bui HH, del Guercio MF, Alexander J, Loffredo J et al (2005b) Characterization of the peptide-binding specificity of Mamu-A*11 results in the identification of SIV-derived epitopes and interspecies cross-reactivity. Immunogenetics 57:53-68. doi:10.1007/s00251-004-0749-z (Pubitemid 40598019)
    • (2005) Immunogenetics , vol.57 , Issue.1-2 , pp. 53-68
    • Sette, A.1    Sidney, J.2    Bui, H.-H.3    Del, G.M.-F.4    Alexander, J.5    Loffredo, J.6    Watkins, D.I.7    Mothe, B.R.8
  • 20
    • 0028867419 scopus 로고
    • New insights into V(D)J recombination and its role in the evolution of the immune system
    • doi:10.1016/1074-7613(95)90124-8
    • Thompson CB (1995) New insights into V(D)J recombination and its role in the evolution of the immune system. Immunity 3:531-539. doi:10.1016/1074- 7613(95)90124-8
    • (1995) Immunity , vol.3 , pp. 531-539
    • Thompson, C.B.1
  • 21
    • 0033046472 scopus 로고    scopus 로고
    • Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses
    • DOI 10.1146/annurev.immunol.17.1.51
    • Yewdell JW, Bennink JR (1999) Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses. Annu Rev Immunol 17:51-88. doi:10.1146/annurev.immunol.17.1.51 (Pubitemid 29241119)
    • (1999) Annual Review of Immunology , vol.17 , pp. 51-88
    • Yewdell, J.W.1    Bennink, J.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.