-
1
-
-
0033572725
-
Effects of macromolecular crowding on protein folding and aggregation
-
van den Berg, B.; Ellis, R.J.; Dobson, C.M. Effects of macromolecular crowding on protein folding and aggregation. Embo J. 1999, 18, 6927-33.
-
(1999)
Embo J
, vol.18
, pp. 6927-6933
-
-
van den Berg, B.1
Ellis, R.J.2
Dobson, C.M.3
-
2
-
-
1242321063
-
-
Life in a crowded world
-
Rivas, G.; Ferrone, F.; Herzfeld, J. Life in a crowded world. EMBO Rep. 2004, 5, 23-27.
-
(2004)
EMBO Rep
, vol.5
, pp. 23-27
-
-
Rivas, G.1
Ferrone, F.2
Herzfeld, J.3
-
3
-
-
0032079008
-
Biophysical compensation mechanism buffering E.coli protein-nucleic acid interactions against changing environment
-
Record, M.T.; Courtenay, E.S.; Cayley, S.; Guttman, H.J. Biophysical compensation mechanism buffering E.coli protein-nucleic acid interactions against changing environment. Trends Biochem. Sci. 1998, 23, 190-194.
-
(1998)
Trends Biochem. Sci
, vol.23
, pp. 190-194
-
-
Record, M.T.1
Courtenay, E.S.2
Cayley, S.3
Guttman, H.J.4
-
4
-
-
0041822089
-
Join the crowd
-
Ellis, R.J.; Minton, A.P. Join the crowd. Nature 2003, 425, 27-28.
-
(2003)
Nature
, vol.4
, Issue.25
, pp. 27-28
-
-
Ellis, R.J.1
Minton, A.P.2
-
5
-
-
84985735713
-
Excluded volume as a determinant of macromolecular structure and reactivity
-
Minton, A.P. Excluded volume as a determinant of macromolecular structure and reactivity. Biopolymers 1981, 20, 2093-2120.
-
(1981)
Biopolymers
, vol.20
, pp. 2093-2120
-
-
Minton, A.P.1
-
6
-
-
41049090929
-
Macromolecular crowding and confinement: Biochemical, biophysical, and potential physiological consequences
-
Zhou, H.-X.; Rivas, G.; Minton, A.P. Macromolecular crowding and confinement: Biochemical, biophysical, and potential physiological consequences. Annu. Rev. Biophys. 2008, 37, 375-397.
-
(2008)
Annu. Rev. Biophys
, vol.37
, pp. 375-397
-
-
Zhou, H.-X.1
Rivas, G.2
Minton, A.P.3
-
7
-
-
30844466169
-
Molecular crowding effects of linear polymers in protein solutions
-
Winzor, D.J.; Wills, P.R., Molecular crowding effects of linear polymers in protein solutions. Biophys. Chem. 2006, 119, 186-195.
-
(2006)
Biophys. Chem
, vol.119
, pp. 186-195
-
-
Winzor, D.J.1
Wills, P.R.2
-
8
-
-
0027318513
-
Macromolecular crowding: Biochemical, biophysical, and physiological consequences
-
Zimmerman, S.B.; Minton, A.P. Macromolecular crowding: Biochemical, biophysical, and physiological consequences. Annu. Rev. Biophys. Biomol. Struct. 1993, 22, 27-65.
-
(1993)
Annu. Rev. Biophys. Biomol. Struct
, vol.22
, pp. 27-65
-
-
Zimmerman, S.B.1
Minton, A.P.2
-
9
-
-
16344364032
-
Models for excluded volume interaction between an unfolded protein and rigid macromolecular cosolutes: Macromolecular crowding and protein stability revisited
-
Minton, A.P. Models for excluded volume interaction between an unfolded protein and rigid macromolecular cosolutes: Macromolecular crowding and protein stability revisited. Biophys. J. 2005, 88, 971-985.
-
(2005)
Biophys. J
, vol.88
, pp. 971-985
-
-
Minton, A.P.1
-
10
-
-
1242338901
-
Loops, linkages, rings, catenanes, cages, and crowders: Entropy based strategies for stabilizing proteins
-
Zhou, H.X. Loops, linkages, rings, catenanes, cages, and crowders: Entropy based strategies for stabilizing proteins. Acc. Chem. Res. 2004, 37, 123-130.
-
(2004)
Acc. Chem. Res
, vol.37
, pp. 123-130
-
-
Zhou, H.X.1
-
11
-
-
0000469960
-
Excluded-volume theory of polymer-protein interactions based on polymer chain statistics
-
Hermans, J. Excluded-volume theory of polymer-protein interactions based on polymer chain statistics. J. Chem. Phys. 1982, 77, 2193-2203.
-
(1982)
J. Chem. Phys
, vol.77
, pp. 2193-2203
-
-
Hermans, J.1
-
12
-
-
0025060129
-
Thermodynamics and the structure of biological macromolecules
-
Eisenberg, H. Thermodynamics and the structure of biological macromolecules. Eur. J. Biochem. 1990, 187, 7-22.
-
(1990)
Eur. J. Biochem
, vol.187
, pp. 7-22
-
-
Eisenberg, H.1
-
13
-
-
16344389134
-
Molecular crowding enhances native state stability and refolding rates
-
Cheung, M.S.; Klimov, D.; Thirumalai, D. Molecular crowding enhances native state stability and refolding rates. Proc. Natl. Acad. Sci. USA 2005, 102, 4753-4758.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 4753-4758
-
-
Cheung, M.S.1
Klimov, D.2
Thirumalai, D.3
-
14
-
-
78651121698
-
The interaction between polysaccharides and other macromolecules. 4. The osmotic pressure of mixtures of serum albumin and hyaluronic acid
-
Laurent, T.C.; Ogston, A.G. The interaction between polysaccharides and other macromolecules. 4. The osmotic pressure of mixtures of serum albumin and hyaluronic acid. Biochem. J. 1963, 89, 249-253.
-
(1963)
Biochem. J
, vol.89
, pp. 249-253
-
-
Laurent, T.C.1
Ogston, A.G.2
-
15
-
-
0015239903
-
Enzyme reactions in polymer media
-
Laurent, T.C. Enzyme reactions in polymer media. Eur. J. Biochem. 1971, 21, 498-506.
-
(1971)
Eur. J. Biochem
, vol.21
, pp. 498-506
-
-
Laurent, T.C.1
-
16
-
-
0034254189
-
Macromolecular crowding perturbs protein refolding kinetics: Implications for folding inside the cell
-
van den Berg, B.; Wain, R.; Dobson, C.M.; Ellis, R.J. Macromolecular crowding perturbs protein refolding kinetics: Implications for folding inside the cell. Embo. J. 2000, 19, 3870-3875.
-
(2000)
Embo. J
, vol.19
, pp. 3870-3875
-
-
van den Berg, B.1
Wain, R.2
Dobson, C.M.3
Ellis, R.J.4
-
17
-
-
0037181497
-
Accelerated alpha-synuclein fibrillation in crowded milieu
-
Uversky, V.N.; Bower, K.S.; Li, J.; Fink, A.L. Accelerated alpha-synuclein fibrillation in crowded milieu. FEBS Lett. 2002, 515, 99-103.
-
(2002)
FEBS Lett
, vol.515
, pp. 99-103
-
-
Uversky, V.N.1
Bower, K.S.2
Li, J.3
Fink, A.L.4
-
18
-
-
33645454904
-
15N NMR spin relaxation dispersion study of the molecular crowding effects on protein folding under native conditions
-
15N NMR spin relaxation dispersion study of the molecular crowding effects on protein folding under native conditions. J. Am. Chem. Soc. 2006, 128, 3916-3917.
-
(2006)
J. Am. Chem. Soc
, vol.128
, pp. 3916-3917
-
-
Ai, X.1
Zhou, Z.2
Bai, Y.3
Choy, W.-Y.4
-
19
-
-
0036229444
-
Effects of molecular crowing by saccharides on alpha-chymotrypsin dimerization
-
Patel, C.N.; Noble, S.M.; Weatherly, G.T.; Tripathy, A.; Winzor, D.J.; Pielak, G.J. Effects of molecular crowing by saccharides on alpha-chymotrypsin dimerization. Protein Sci. 2002, 11, 997-1003.
-
(2002)
Protein Sci
, vol.11
, pp. 997-1003
-
-
Patel, C.N.1
Noble, S.M.2
Weatherly, G.T.3
Tripathy, A.4
Winzor, D.J.5
Pielak, G.J.6
-
20
-
-
0034987618
-
Interpreting the effect of small uncharged solutes on protein-folding equilibria
-
Davis-Searles, P.R.; Saunders, A.J.; Erie, D.A.; Winzor, D.J.; Pielak, G.J. Interpreting the effect of small uncharged solutes on protein-folding equilibria. Annu. rev. Biophys. Biomol. Struct. 2001, 30, 271-306.
-
(2001)
Annu. rev. Biophys. Biomol. Struct
, vol.30
, pp. 271-306
-
-
Davis-Searles, P.R.1
Saunders, A.J.2
Erie, D.A.3
Winzor, D.J.4
Pielak, G.J.5
-
21
-
-
2442543316
-
Reaction kinetics in intracellular environments with macromolecular crowding: Simulations and rate laws
-
Schnell, S.; Turner, T.E. Reaction kinetics in intracellular environments with macromolecular crowding: Simulations and rate laws. Prog. Biophys. Mol. Biol. 2004, 85, 235-260.
-
(2004)
Prog. Biophys. Mol. Biol
, vol.85
, pp. 235-260
-
-
Schnell, S.1
Turner, T.E.2
-
22
-
-
0037470574
-
Effect of dextran on protein stability and conformation attributed to macromolecular crowding
-
Sasahara, K.; McPhie, P.; Minton, A.P. Effect of dextran on protein stability and conformation attributed to macromolecular crowding. J. Mol. Biol. 2003, 326, 1227-1237.
-
(2003)
J. Mol. Biol
, vol.326
, pp. 1227-1237
-
-
Sasahara, K.1
McPhie, P.2
Minton, A.P.3
-
23
-
-
17044454299
-
Efficacy of macromolecular crowding in forcing proteins to fold
-
Qu, Y.; Bolen, D. Efficacy of macromolecular crowding in forcing proteins to fold. Biophys. Chem. 2002, 101-102, 155-165.
-
(2002)
Biophys. Chem
, vol.101-102
, pp. 155-165
-
-
Qu, Y.1
Bolen, D.2
-
24
-
-
0036792049
-
FlgM gains structure in living cells
-
Dedmon, M.M.; Patel, C.N.; Young, G.B.; Pielak, G.J. FlgM gains structure in living cells. Proc. Natl. Acad. Sci. USA 2002, 99, 12681-12684.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 12681-12684
-
-
Dedmon, M.M.1
Patel, C.N.2
Young, G.B.3
Pielak, G.J.4
-
25
-
-
0014345594
-
An approach to the study of phase separation in ternary aqueous systems
-
Edmond, E.; Ogston, A.G. An approach to the study of phase separation in ternary aqueous systems. Biochem. J. 1968, 109, 569-576.
-
(1968)
Biochem. J
, vol.109
, pp. 569-576
-
-
Edmond, E.1
Ogston, A.G.2
-
26
-
-
0025700708
-
Thermodynamic nonideality in macromolecular solutions
-
Shearwin, K.E.; Winzor, D.J. Thermodynamic nonideality in macromolecular solutions. Eur. J. Biochem. 1990, 190, 523-529.
-
(1990)
Eur. J. Biochem
, vol.190
, pp. 523-529
-
-
Shearwin, K.E.1
Winzor, D.J.2
-
27
-
-
0041624356
-
The largest protein observed to fold by two-state kinetic mechanism does not obey contact-order correlation
-
Jones, K.; Guidry, J.; Wittung-Stafshede, P. The largest protein observed to fold by two-state kinetic mechanism does not obey contact-order correlation. J. Am. Chem. Soc. 2003, 125, 9096-9097.
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 9096-9097
-
-
Jones, K.1
Guidry, J.2
Wittung-Stafshede, P.3
-
28
-
-
0037077273
-
Crystal structure of Lyme Disease Variable Surface Antigen VlsE of Borrelia burgdorferi
-
Eicken, C.; Sharma, V.; Klabunde, T.; Lawrenz, M.B.; Hardham, J.M.; Norris, S.J.; Sacchettini, J.C. Crystal structure of Lyme Disease Variable Surface Antigen VlsE of Borrelia burgdorferi. J. Biol. Chem. 2002, 277, 21691-21696.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 21691-21696
-
-
Eicken, C.1
Sharma, V.2
Klabunde, T.3
Lawrenz, M.B.4
Hardham, J.M.5
Norris, S.J.6
Sacchettini, J.C.7
-
29
-
-
0032566696
-
Structural characterisation of apoflavodoxin shows that the location of the stable nucleus differs among proteins with a flavodoxin-like topology
-
Steensma, E.; van Mierlo, C.P.M. Structural characterisation of apoflavodoxin shows that the location of the stable nucleus differs among proteins with a flavodoxin-like topology. J. Mol. Biol. 1998, 252, 653-666.
-
(1998)
J. Mol. Biol
, vol.252
, pp. 653-666
-
-
Steensma, E.1
van Mierlo, C.P.M.2
-
30
-
-
18144380285
-
Effect of inorganic phosphate on FMN binding and loop flexibility in Desulfovibrio desulfuricans apo-flavodoxin
-
Muralidhara, B.K.; Chen, M.; Ma, J.; Wittung-Stafshede, P. Effect of inorganic phosphate on FMN binding and loop flexibility in Desulfovibrio desulfuricans apo-flavodoxin. J. Mol. Biol. 2005, 349, 87-97.
-
(2005)
J. Mol. Biol
, vol.349
, pp. 87-97
-
-
Muralidhara, B.K.1
Chen, M.2
Ma, J.3
Wittung-Stafshede, P.4
-
31
-
-
4944267705
-
Thermal unfolding of apo and holo Desulfovibrio desulfuricans Flavodoxin: Cofactor stablizes folded and intermediate states
-
Muralidhara, B.K.; Wittung-Stafshede, P. Thermal unfolding of apo and holo Desulfovibrio desulfuricans Flavodoxin: Cofactor stablizes folded and intermediate states Biochemistry 2004, 43, 12855-12864.
-
(2004)
Biochemistry
, vol.43
, pp. 12855-12864
-
-
Muralidhara, B.K.1
Wittung-Stafshede, P.2
-
32
-
-
0030628825
-
Theory of protein folding: The energy landscape perspective
-
Onuchic, J.N.; Luthey-Schulten, Z.; Wolynes, P.G. Theory of protein folding: The energy landscape perspective. Annu. Rev. Phys. Chem. 1997, 48, 545-600.
-
(1997)
Annu. Rev. Phys. Chem
, vol.48
, pp. 545-600
-
-
Onuchic, J.N.1
Luthey-Schulten, Z.2
Wolynes, P.G.3
-
33
-
-
0023449962
-
Spin glasses and the statistical mechanics of protein folding
-
Bryngelson, J.D.; Wolynes, P.G. Spin glasses and the statistical mechanics of protein folding. Proc. Natl. Acad. Sci. USA 1987, 84, 7524-7528.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 7524-7528
-
-
Bryngelson, J.D.1
Wolynes, P.G.2
-
35
-
-
0345862090
-
The Energy landscape for protein folding and possible connections to function
-
Cheung, M.S.; Chavez, L.L.; Onuchic, J.N. The Energy landscape for protein folding and possible connections to function. Polymer 2004, 45, 547-555.
-
(2004)
Polymer
, vol.45
, pp. 547-555
-
-
Cheung, M.S.1
Chavez, L.L.2
Onuchic, J.N.3
-
36
-
-
37649016316
-
Molecular crowding enhances native structure and stability of alpha/beta protein flavodoxin
-
Stagg, L.; Zhang, S.-Q.; Cheung, M.S.; Wittung-Stafshede, P. Molecular crowding enhances native structure and stability of alpha/beta protein flavodoxin. Proc. Natl. Acad. Sci. USA 2007, 104, 18976-18981.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 18976-18981
-
-
Stagg, L.1
Zhang, S.-Q.2
Cheung, M.S.3
Wittung-Stafshede, P.4
-
37
-
-
61449245064
-
A robust, accurate, and high-efficient all- atomistic protein reconstruction method from low-resolution protein models
-
submitted
-
Samiotakis, A.; Homouz, D.; Cheung, M.S. SCAAL: A robust, accurate, and high-efficient all- atomistic protein reconstruction method from low-resolution protein models. submitted, 2008.
-
(2008)
-
-
Samiotakis, A.1
Homouz, D.2
Cheung3
SCAAL, M.S.4
-
38
-
-
50149092143
-
Crowded, celllike environment induces shape changes in aspherical protein
-
Homouz, D.; Perham, M.; Samiotakis, A.; Cheung, M.S.; Wittung-Stafshede, P. Crowded, celllike environment induces shape changes in aspherical protein. Proc. Natl. Acad. Sci. USA 2008, 105, 11754-11759.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 11754-11759
-
-
Homouz, D.1
Perham, M.2
Samiotakis, A.3
Cheung, M.S.4
Wittung-Stafshede, P.5
-
39
-
-
0034039755
-
Effect of a concentrated "inert" macromolecular cosolute on the stability of a globular protein with respect to denaturation by heat and by chaotropes: A statistical-thermodynamic model
-
Minton, A.P. Effect of a concentrated "inert" macromolecular cosolute on the stability of a globular protein with respect to denaturation by heat and by chaotropes: A statistical-thermodynamic model. Biophys. J. 2000, 78, 101-109.
-
(2000)
Biophys. J
, vol.78
, pp. 101-109
-
-
Minton, A.P.1
-
40
-
-
35348851499
-
Macromolecular crowding increases structural content of folded proteins
-
Perham, M.; Stagg, L.; Wittung-Stafshede, P. Macromolecular crowding increases structural content of folded proteins. FEBS Lett. 2007, 581, 5065-5069.
-
(2007)
FEBS Lett
, vol.581
, pp. 5065-5069
-
-
Perham, M.1
Stagg, L.2
Wittung-Stafshede, P.3
-
41
-
-
58849112212
-
Macromolecular crowding modulates folding mechanism of α/β protein apoflavodoxin
-
Homouz, D.; Stagg, L.; Wittung-Stafshede, P.; Cheung, M.S. Macromolecular crowding modulates folding mechanism of α/β protein apoflavodoxin. Biophys. J. 2009, 96, 671-680.
-
(2009)
Biophys. J
, vol.96
, pp. 671-680
-
-
Homouz, D.1
Stagg, L.2
Wittung-Stafshede, P.3
Cheung, M.S.4
-
42
-
-
0242368163
-
Exploring the interplay of topology and secondary structural formation in the protein folding problem
-
Cheung, M.S.; Finke, J.M.; Callahan, B.; Onuchic, J.N. Exploring the interplay of topology and secondary structural formation in the protein folding problem. J. Phys. Chem. B. 2003, 107, 11193-11200.
-
(2003)
J. Phys. Chem. B
, vol.107
, pp. 11193-11200
-
-
Cheung, M.S.1
Finke, J.M.2
Callahan, B.3
Onuchic, J.N.4
-
43
-
-
0020857469
-
Randomness of the process of protein folding
-
Go, N.; Abe, H. Randomness of the process of protein folding. Int. J. Pept. Protein Res. 1983, 22, 622-632.
-
(1983)
Int. J. Pept. Protein Res
, vol.22
, pp. 622-632
-
-
Go, N.1
Abe, H.2
-
44
-
-
33746322440
-
Do proteins with similar folds have similar transition state structures? A diffuse transition state of the 169 residue apoflavodoxin
-
Bueno, M.; Ayuso-Tejedor, S.; Sancho, J. Do proteins with similar folds have similar transition state structures? A diffuse transition state of the 169 residue apoflavodoxin. J. Mol. Biol. 2006, 359, 813-824.
-
(2006)
J. Mol. Biol
, vol.359
, pp. 813-824
-
-
Bueno, M.1
Ayuso-Tejedor, S.2
Sancho, J.3
-
45
-
-
0033607208
-
rd, Exploring the origins of topological frustration: Design of a minimally frustrated model of fragment B of protein A
-
rd, Exploring the origins of topological frustration: Design of a minimally frustrated model of fragment B of protein A. Proc. Natl. Acad. Sci. USA 1999, 96, 12512-12517.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 12512-12517
-
-
Shea, J.E.1
Onuchic, J.N.2
Brooks, C.L.3
-
46
-
-
0034685604
-
Topological and energetic factors: What determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins
-
Clementi, C.; Nymeyer, H.; Onuchic, J.N. Topological and energetic factors: What determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins. J. Mol. Biol. 2000, 298, 937-953.
-
(2000)
J. Mol. Biol
, vol.298
, pp. 937-953
-
-
Clementi, C.1
Nymeyer, H.2
Onuchic, J.N.3
-
47
-
-
0011708728
-
Cavities in the hard-sphere crystal and fluid
-
Bowles, R.K.; Speedy, R.J. Cavities in the hard-sphere crystal and fluid. Mol. Phys. 1994, 83, 113-125.
-
(1994)
Mol. Phys
, vol.83
, pp. 113-125
-
-
Bowles, R.K.1
Speedy, R.J.2
-
48
-
-
0000303810
-
Interaction between particles suspended in solutions of macromolecules
-
Asakura, S.; Oosawa, F. Interaction between particles suspended in solutions of macromolecules. J. Polym. Sci. 1958, 33, 183-192.
-
(1958)
J. Polym. Sci
, vol.33
, pp. 183-192
-
-
Asakura, S.1
Oosawa, F.2
-
49
-
-
0034612228
-
Investigation of routes and funnels in protein folding by free energy functional methods
-
Plotkin, S.S.; Onuchic, J.N. Investigation of routes and funnels in protein folding by free energy functional methods. Proc. Natl. Acad. Sci. USA 2000, 97, 6509-6514.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 6509-6514
-
-
Plotkin, S.S.1
Onuchic, J.N.2
-
50
-
-
33745931359
-
Multiple routes lead to the native state in the energy landscape of the beta-trefoil family
-
Chavez, L.L.; Gosavi, S.; Jennings, P.A.; Onuchic, J.N. Multiple routes lead to the native state in the energy landscape of the beta-trefoil family. Proc. Natl. Acad. Sci. USA 2006, 103, 10254-10258.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 10254-10258
-
-
Chavez, L.L.1
Gosavi, S.2
Jennings, P.A.3
Onuchic, J.N.4
-
51
-
-
0344286138
-
Sensitive and specific serodiagnosis of Lyme disease by enzyme-linken immunosorbent assay with a peptide based on an immunodominant conserved region of borrelia burgdorferi VlsE
-
Liang, F.T.; Steere, A.C.; Marques, A.R.; Johnson, B.J.B.; Miller, J.N.; Phillips, M.T. Sensitive and specific serodiagnosis of Lyme disease by enzyme-linken immunosorbent assay with a peptide based on an immunodominant conserved region of borrelia burgdorferi VlsE. J. Clin. Microbiol. 1999, 37, 3990-3996.
-
(1999)
J. Clin. Microbiol
, vol.37
, pp. 3990-3996
-
-
Liang, F.T.1
Steere, A.C.2
Marques, A.R.3
Johnson, B.J.B.4
Miller, J.N.5
Phillips, M.T.6
-
52
-
-
0024065282
-
Cirular dichroism studies of distorted alpha- helices, twisted beta-sheets, and beta turns
-
Manning, M.C.; Illangasekare, M.; Woody, R.W. Cirular dichroism studies of distorted alpha- helices, twisted beta-sheets, and beta turns. Biophys. Chem. 1988, 31, 77-86.
-
(1988)
Biophys. Chem
, vol.31
, pp. 77-86
-
-
Manning, M.C.1
Illangasekare, M.2
Woody, R.W.3
-
53
-
-
0035470852
-
Antibody response to IR6, a conserved immunodominant region of the VlsE lipoprotein, wanes rapidly after antibiotic treatment of Borrelia burgdorderi infection in experimental animals and in humans
-
Philipp, M.T.; Bowers, L.C.; Fawcett, P.T.; Jacobs, M.B.; Liang, F.T.; Marques, A.R.; Mitchell, P.D.; Purcell, J. E.; Ratterree, M.S.; Straubinger, R.K. Antibody response to IR6, a conserved immunodominant region of the VlsE lipoprotein, wanes rapidly after antibiotic treatment of Borrelia burgdorderi infection in experimental animals and in humans. J. Infect. Dis. 2001, 184, 870-878.
-
(2001)
J. Infect. Dis
, vol.184
, pp. 870-878
-
-
Philipp, M.T.1
Bowers, L.C.2
Fawcett, P.T.3
Jacobs, M.B.4
Liang, F.T.5
Marques, A.R.6
Mitchell, P.D.7
Purcell, J.E.8
Ratterree, M.S.9
Straubinger, R.K.10
-
54
-
-
0032502839
-
Contact order, transition state placement and the refolding rates of single domain proteins
-
Plaxco, K.W.; Simons, K.T.; Baker, D. Contact order, transition state placement and the refolding rates of single domain proteins. J. Mol. Biol. 1998, 277, 985-994.
-
(1998)
J. Mol. Biol
, vol.277
, pp. 985-994
-
-
Plaxco, K.W.1
Simons, K.T.2
Baker, D.3
-
55
-
-
46449120907
-
Predicting protein folding rates from geometric contact and amino acid sequences
-
Ouyang, Z.; Liang, J. Predicting protein folding rates from geometric contact and amino acid sequences. Protein Sci. 2008, 17, 1256-1263.
-
(2008)
Protein Sci
, vol.17
, pp. 1256-1263
-
-
Ouyang, Z.1
Liang, J.2
-
56
-
-
33750806263
-
Mixed macromolecular crowding accelerates the refolding of rabbit muscle creatine kinase: Implications for protein folding in physiological environment
-
Du, F.; Zhou, Z.; Mo, Z.Y.; Shi, J.Z.; Chen, J.; Liang, Y. Mixed macromolecular crowding accelerates the refolding of rabbit muscle creatine kinase: Implications for protein folding in physiological environment. J. Mol. Biol. 2006, 364, 469-482.
-
(2006)
J. Mol. Biol
, vol.364
, pp. 469-482
-
-
Du, F.1
Zhou, Z.2
Mo, Z.Y.3
Shi, J.Z.4
Chen, J.5
Liang, Y.6
-
57
-
-
51349126098
-
Effect of mixed macromolecular crowding agents on protein folding
-
Zhou, H.-X. Effect of mixed macromolecular crowding agents on protein folding. Proteins 2008, 72, 1109-1113.
-
(2008)
Proteins
, vol.72
, pp. 1109-1113
-
-
Zhou, H.-X.1
-
58
-
-
0034691149
-
Native topology determines force-induced unfolding pathways in globular proteins
-
Klimov, D.K.; Thirumalai, D. Native topology determines force-induced unfolding pathways in globular proteins. Proc. Natl. Acad. Sci. USA 2000, 97, 7254-7259.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 7254-7259
-
-
Klimov, D.K.1
Thirumalai, D.2
-
59
-
-
0033005899
-
Pair potentials for protein folding: Choice of reference states and sensitivity of predicted native states to variations in the interaction schemes
-
Betancourt, M.R.; Thirumalai, D. Pair potentials for protein folding: Choice of reference states and sensitivity of predicted native states to variations in the interaction schemes. Protein Sci. 1999, 8, 361-369.
-
(1999)
Protein Sci
, vol.8
, pp. 361-369
-
-
Betancourt, M.R.1
Thirumalai, D.2
-
60
-
-
84893881633
-
-
Case, D.; Pearlman, D.A.; Caldwell, J.W.; Cheatham, T.E.; Ross, W.S.; Simmerling, C.L.; Darden, T.A.; Merz, K.M.; Stanton, R.V.; Cheng, A.L; et al. AMBER6, UCSF, 1999.
-
Case, D.; Pearlman, D.A.; Caldwell, J.W.; Cheatham, T.E.; Ross, W.S.; Simmerling, C.L.; Darden, T.A.; Merz, K.M.; Stanton, R.V.; Cheng, A.L; et al. AMBER6, UCSF, 1999.
-
-
-
-
61
-
-
0001616080
-
Replica-exchange molecular dynamics methods for protein folding
-
Sugita, Y.; Okamoto, Y. Replica-exchange molecular dynamics methods for protein folding. Chem. Phys. Lett. 1999, 314, 141-151.
-
(1999)
Chem. Phys. Lett
, vol.314
, pp. 141-151
-
-
Sugita, Y.1
Okamoto, Y.2
-
62
-
-
84986519238
-
The weighted histogram analysis method for free-energy calculations on biomolecules I. The method
-
Kumar, S.; Bouzida, D.; Swendsen, R.H.; Kollman, P.A.; Rosenberg, J.M. The weighted histogram analysis method for free-energy calculations on biomolecules I. The method. J. Comput. Chem. 1992, 13, 1011-1021.
-
(1992)
J. Comput. Chem
, vol.13
, pp. 1011-1021
-
-
Kumar, S.1
Bouzida, D.2
Swendsen, R.H.3
Kollman, P.A.4
Rosenberg, J.M.5
-
63
-
-
33947398571
-
Use of the weighted histogram analysis method for the analysis of simulated and parallel tempering simulations
-
Chodera, J.D.; Swope, W.C.; Pitera, J.W.; Seok, C.; Dill, K. A. Use of the weighted histogram analysis method for the analysis of simulated and parallel tempering simulations. J. Chem. Theory Comput. 2007, 3, 26-41.
-
(2007)
J. Chem. Theory Comput
, vol.3
, pp. 26-41
-
-
Chodera, J.D.1
Swope, W.C.2
Pitera, J.W.3
Seok, C.4
Dill, K.A.5
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