The effect of template choice on morphometric analysis of pediatric brain data

NeuroImage

Volumn 45, Issue 3, 2009, Pages 769-777

  Yoon, Uicheul ^a   Fonov, Vladimir S ^a   Perusse, Daniel ^b   Evans, Alan C ^a  

^a MCGILL UNIVERSITY   (Canada)

^b UNIVERSITY OF MONTREAL   (Canada)

Author keywords

Cortical surface; Magnetic resonance imaging; Parcellation; Pediatric brain template; Spatial normalization; Tissue classification

Indexed keywords

ARTICLE; BRAIN CORTEX; BRAIN MAPPING; BRAIN SIZE; CEREBROSPINAL FLUID; CHILD; CONTROLLED STUDY; FEMALE; GRAY MATTER; HUMAN; HUMAN EXPERIMENT; IMAGE ANALYSIS; IMAGE RECONSTRUCTION; MALE; MORPHOMETRICS; NEUROIMAGING; NORMAL HUMAN; NUCLEAR MAGNETIC RESONANCE IMAGING; PRIORITY JOURNAL; SCHOOL CHILD; VOLUMETRY; WHITE MATTER;

ADULT; BRAIN; BRAIN MAPPING; CHILD; FEMALE; HUMANS; IMAGE INTERPRETATION, COMPUTER-ASSISTED; MAGNETIC RESONANCE IMAGING; MALE; PEDIATRICS; TWIN STUDIES AS TOPIC;

EID: 61449182527     PISSN: 10538119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2008.12.046     Document Type: Article

References (46)

1. Ashburner J., and Friston K.J. Voxel-based morphometry-the methods. NeuroImage 11 (2000) 805-821
2. Bookstein F.L. Landmark methods for forms without landmarks: morphometrics of group differences in outline shape. Med. Image Anal. 1 (1997) 225-243
3. Burgund E.D., Kang H.C., Kelly J.E., Buckner R.L., Snyder A.Z., Petersen S.E., and Schlaggar B.L. The feasibility of a common stereotactic space for children and adults in fMRI studies of development. NeuroImage 17 (2002) 184-200
4. Chung M.K., Worsley K.J., Robbins S., Paus T., Taylor J., Giedd J.N., Rapoport J.L., and Evans A.C. Deformation-based surface morphometry applied to gray matter deformation. NeuroImage 18 (2003) 198-213
5. Collins D.L., Neelin P., Peters T.M., and Evans A.C. Automatic 3D intersubject registration of MR volumetric data in standardized Talairach space. J. Comput. Assist. Tomogr. 18 (1994) 192-205
6. Courchesne E., Chisum H.J., Townsend J., Cowles A., Covington J., Egaas B., Harwood M., Hinds S., and Press G.A. Normal brain development and aging: quantitative analysis at in vivo MR imaging in healthy volunteers. Radiology 216 (2000) 672-682
7. Evans A.C., and Brain Development Cooperative Group. The NIH MRI study of normal brain development. NeuroImage 30 (2006) 184-202
8. Fischl B., Sereno M.I., Tootell R.B., and Dale A.M. High-resolution intersubject averaging and a coordinate system for the cortical surface. Hum. Brain Mapp. 8 (1999) 272-284
9. Genovese C.R., Lazar N.A., and Nichols T. Thresholding of statistical maps in functional neuroimaging using the false discovery rate. NeuroImage 15 (2002) 870-878
10. Giedd J.N., Blumenthal J., Jeffries N.O., Castellanos F.X., Liu H., Zijdenbos A., Paus T., Evans A.C., and Rapoport J.L. Brain development during childhood and adolescence: a longitudinal MRI study. Nat. Neurosci. 2 (1999) 861-863
11. Good C.D., Johnsrude I., Ashburner J., Henson R.N.A., Friston K.J., and Frackowiak R.S.J. Cerebral asymmetry and the effects of sex and handedness on brain structure: a voxel-based morphometric analysis of 465 normal adult human brains. NeuroImage 14 (2001) 685-700
12. Grabner G., Janke A.L., Budge M.M., Smith D., Pruessner J., and Collins D.L. Symmetric atlasing and model based segmentation: an application to the hippocampus in older adults. Med. Image Comput. Comput.-Assist. Interv. - Miccai 4191 Pt. 2 (2006) 58-66
13. Guimond A., Meunier J., and Thirion J.P. Average brain models: a convergence study. Comput. Vis. Image Underst. 77 (2000) 192-210
14. Hoeksma M.R., Kenemans J.L., Kemner C., and van Engeland H. Variability in spatial normalization of pediatric and adult brain images. Clin. Neurophysiol. 116 (2005) 1188-1194
15. Im K., Lee J.M., Lyttelton O., Kim S.H., Evans A.C., and Kim S.I. Brain size and cortical structure in the adult human brain. Cereb. Cortex 18 (2008) 2181-2191
16. Kabani N., Le Goualher G., MacDonald D., and Evans A.C. Measurement of cortical thickness using an automated 3-D algorithm: a validation study. NeuroImage 13 (2001) 375-380
17. Kim J.S., Singh V., Lee J.K., Lerch J., Ad-Dab'bagh Y., MacDonald D., Lee J.M., Kim S.I., and Evans A.C. Automated 3-D extraction and evaluation of the inner and outer cortical surfaces using a Laplacian map and partial volume effect classification. NeuroImage 27 (2005) 210-221
18. Kiselev V.G., Hahn K.R., and Auer D.P. Is the brain cortex a fractal?. NeuroImage 20 (2003) 1765-1774
19. Lange N., Giedd J.N., Castellanos F.X., Vaituzis A.C., and Rapoport J.L. Variability of human brain structure size: ages 4-20 years. Psychiatry Res. 74 (1997) 1-12
20. Lee J.K., Lee J.M., Kim J.S., Kim I.Y., Evans A.C., and Kim S.I. A novel quantitative cross-validation of different cortical surface reconstruction algorithms using MRI phantom. NeuroImage 31 (2006) 572-584
21. Lerch J.P., and Evans A.C. Cortical thickness analysis examined through power analysis and a population simulation. NeuroImage 24 (2005) 163-173
22. Lotjonen J., Reissman P.J., Magnin I.E., Nenonen J., and Katila T. A triangulation method of an arbitrary point set for biomagnetic problems. IEEE Trans. Magn. 34 (1998) 2228-2233
23. Lyttelton O., Boucher M., Robbins S., and Evans A. An unbiased iterative group registration template for cortical surface analysis. NeuroImage 34 (2007) 1535-1544
24. MacDonald D., Kabani N., Avis D., and Evans A.C. Automated 3-D extraction of inner and outer surfaces of cerebral cortex from MRI. NeuroImage 12 (2000) 340-356
25. Machilsen B., d'Agostino E., Maes F., Vandermeulen D., Hahn H.K., Lagae L., and Stiers P. Linear normalization of MR brain images in pediatric patients with periventricular leukomalacia. NeuroImage 35 (2007) 686-697
26. Mazziotta J.C., Toga A.W., Evans A., Fox P., and Lancaster J. A probabilistic atlas of the human brain: theory and rationale for its development. The International Consortium for Brain Mapping (ICBM). NeuroImage 2 (1995) 89-101
27. Miller M., Banerjee A., Christensen G., Joshi S., Khaneja N., Grenander U., and Matejic L. Statistical methods in computational anatomy. Stat. Methods Med. Res. 6 (1997) 267-299
28. Muzik O., Chugani D.C., Juhasz C., Shen C., and Chugani H.T. Statistical parametric mapping: assessment of application in children. NeuroImage 12 (2000) 538-549
29. Pfefferbaum A., Mathalon D.H., Sullivan E.V., Rawles J.M., Zipursky R.B., and Lim K.O. A quantitative magnetic resonance imaging study of changes in brain morphology from infancy to late adulthood. Arch. Neurol. 51 (1994) 874-887
30. Shaw P., Greenstein D., Lerch J., Clasen L., Lenroot R., Gogtay N., Evans A., Rapoport J., and Giedd J. Intellectual ability and cortical development in children and adolescents. Nature 440 (2006) 676-679
31. Sled J.G., Zijdenbos A.P., and Evans A.C. A nonparametric method for automatic correction of intensity nonuniformity in MRI data. IEEE Trans. Med. Imaging 17 (1998) 87-97
32. Smith S.M. Fast robust automated brain extraction. Hum. Brain Mapp. 17 (2002) 143-155
33. Talairach J., and Tournoux P. Co-planar Stereotaxic Atlas of the Human Brain: 3-Dimensional Proportional System-An Approach to Cerebral Imaging (1988), Thieme Medical Publishers, New York
34. Thompson P.M., Giedd J.N., Woods R.P., MacDonald D., Evans A.C., and Toga A.W. Growth patterns in the developing brain detected by using continuum mechanical tensor maps. Nature 404 (2000) 190-193
35. Thompson P.M., Mega M.S., Narr K.L., Sowell E.R., Blanton R.E., and Toga A.W. Brain Image Analysis and Atlas Construction (2000), SPIE Press, Bellingham
36. Thompson P.M., Lee A.D., Dutton R.A., Geaga J.A., Hayashi K.M., Eckert M.A., Bellugi U., Galaburda A.M., Korenberg J.R., Mills D.L., Toga A.W., and Reiss A.L. Abnormal cortical complexity and thickness profiles mapped in Williams syndrome. J. Neurosci. 25 (2005) 4146-4158
37. Toga A.W., and Thompson P.M. The role of image registration in brain mapping. Image Vis. Comput. 19 (2001) 3-24
38. Tohka J., Zijdenbos A., and Evans A. Fast and robust parameter estimation for statistical partial volume models in brain MRI. NeuroImage 23 (2004) 84-97
39. Van Essen D.C., and Drury H.A. Structural and functional analyses of human cerebral cortex using a surface-based atlas. J. Neurosci. 17 (1997) 7079-7102
40. Van Essen D.C., Dierker D., Snyder A.Z., Raichle M.E., Reiss A.L., and Korenberg J. Symmetry of cortical folding abnormalities in Williams syndrome revealed by surface-based analyses. J. Neurosci. 26 (2006) 5470-5483
41. Wilke M., Schmithorst V.J., and Holland S.K. Assessment of spatial normalization of whole-brain magnetic resonance images in children. Hum. Brain Mapp. 17 (2002) 48-60
42. Wilke M., Schmithorst V.J., and Holland S.K. Normative pediatric brain data for spatial normalization and segmentation differs from standard adult data. Magn. Reson. Med. 50 (2003) 749-757
43. Wilke M., Holland S.K., Altaye M., and Gaser C. Template-O-Matic: a toolbox for creating customized pediatric templates. Neuroimage 41 (2008) 903-913
44. Yoon U., Lee J.M., Im K., Shin Y.W., Cho B.H., Kim I.Y., Kwon J.S., and Kim S.I. Pattern classification using principal components of cortical thickness and its discriminative pattern in schizophrenia. NeuroImage 34 (2007) 1405-1415
45. Zijdenbos A.P., Forghani R., and Evans A.C. Automatic "pipeline" analysis of 3-D MRI data for clinical trials: application to multiple sclerosis. IEEE Trans. Med. Imaging 21 (2002) 1280-1291
46. Zilles K., Armstrong E., Schleicher A., and Kretschmann H.J. The human pattern of gyrification in the cerebral cortex. Anat. Embryol. (Berl) 179 (1988) 173-179