Rapid pre-clinical detection of classical swine fever by reverse transcription loop-mediated isothermal amplification

Molecular and Cellular Probes

Volumn 23, Issue 2, 2009, Pages 71-74

  Chen, Hao tai ^a   Zhang, Jie ^a   Ma, Li na ^a   Ma, Yan ping ^a   Ding, Yao zhong ^a   Liu, Xiang tao ^a   Chen, Lei ^b   Ma, Li qing ^c   Zhang, Yong guang ^a   Liu, Yong sheng ^a  

^a AGRO ENVIRONMENTAL PROTECTION INSTITUTE   (China)

^b CHINA INSTITUTE OF VETERINARY DRUG CONTROL   (China)

^c QINGHAI UNIVERSITY   (China)

Author keywords

Classical swine fever virus (CSFV); Pre clinical detection; Reverse transcription of loop mediated isothermal amplification (RT LAMP); RT PCR

Indexed keywords

ARTERIVIRUS; ARTICLE; BLOOD SAMPLING; CIRCOVIRIDAE; CROSS REACTION; GEL ELECTROPHORESIS; INTERMETHOD COMPARISON; JAPANESE ENCEPHALITIS VIRUS; NONHUMAN; NOSE SMEAR; NUCLEIC ACID AMPLIFICATION; NUCLEOTIDE SEQUENCE; PESTIVIRUS; PORCINE PARVOVIRUS; PRIORITY JOURNAL; PSEUDORABIES HERPETOVIRUS; REVERSE TRANSCRIPTION LOOP MEDIATED ISOTHERMAL AMPLIFICATION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SWINE DISEASE; THROAT CULTURE; VIRUS DETECTION; VIRUS ISOLATION;

ANIMALS; CLASSICAL SWINE FEVER; CLASSICAL SWINE FEVER VIRUS; NUCLEIC ACID AMPLIFICATION TECHNIQUES; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SWINE;

CLASSICAL SWINE FEVER VIRUS; JAPANESE ENCEPHALITIS VIRUS; PORCINE CIRCOVIRUS 2; PORCINE PARVOVIRUS; PORCINE RESPIRATORY AND REPRODUCTIVE SYNDROME VIRUS; SUID HERPESVIRUS 1; SUIDAE; SUS;

EID: 61449170977     PISSN: 08908508     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mcp.2008.12.001     Document Type: Article

References (36)

1. Becher P., Ramirez R.A., Orlich M., Rosales S.C., Konig M., Schweizer M., et al. Genetic and antigenic characterization of novel pestivirus genotypes: implications for classification. Virology 311 (2003) 96-104
2. Wengler G. Classification and nomenclature of viruses. Fifth report of the international committee on taxonomy of viruses. Arch Virol Suppl 2 (1991) 223-233
3. Thiel H.J., Stark R., Weiland E., Rümenapf T., and Meyers G. Hog cholera virus: molecular composition of virions from a pestivirus. J Virol 65 (1991) 4705-4712
4. McGoldrick A., Lowings J.P., Ibata G., Sands J.J., Belak S., and Paton D.J. A novel approach to the detection of classical swine fever virus by RT-PCR with a fluorogenic probe (TaqMan). J Virol Methods 72 (1998) 125-135
5. Lowings P., Ibata G., Needham J., and Paton D. Classical swine fever virus diversity and evolution. J Gen Virol 77 (1996) 1311-1321
6. Schroeder B.A., and Balassu-Chan T.C. Specific sequence amplification of bovine viral diarrhoea virus nucleic acid. Arch Virol 111 (1990) 239-246
7. Wirtz B., Tratchin J.D., Muller H.K., and Mitchell D.B. Detection of hog cholera virus and differentiation from another pestiviruses by polymerase chain reaction. J Clin Microbiol 31 (1993) 1148-1154
8. Meyers G., and Thiel H.J. Molecular characterization of pestiviruses. Adv Virus Res 47 (1996) 53-118
9. Dahle J., and Liess B. Comparative study with cloned classical swine fever virus strains Alfort and Glentorf: clinical, pathological, virological, and serological findings in weaner pigs. Wien Tieraerztl Monschr 82 (1995) 232-238
10. Depner K., Gruber A., and Liess B. Experimental infection of weaner pigs with a field isolate of hog cholera/classical swine fever virus derived from a recent outbreak in lower saxony. I. Clinical, virological and serological findings. Wien Tieraerztl Monschr 81 (1994) 370-373
11. Floegel-Niesmann G. Classical swine fever (CSF) marker vaccine. Trial III. Evaluation of discriminatory ELISAs. Vet Microbiol 83 (2001) 121-136
12. Haegeman A., Dewulf J., Vrancken R., Tignon M., Ribbens S., and Koenen F. Characterisation of the discrepancy between PCR and virus isolation in relation to classical swine fever virus detection. J Virol Methods 136 (2006) 44-50
13. Ressang A.A., and de Boer G.F. A comparison between the cell culture, frozen tissue section, impression and mucosal smear techniques for fluorescent antibody in the diagnosis of hog cholera. Netherlands J Vet Sci 1 (1968) 72
14. Clavijo A., Zhou E.M., Vydelingum S., and Heckert R. Development and evaluation of a novel antigen capture assay for the detection of classical swine fever virus antigens. Vet Microbiol 60 (1998) 155-168
15. Shannon A.D., Morrissy C., Mackintosh S.G., and Westbury H.A. Detection of hog cholera virus antigens in experimentally-infected pigs using an antigen-capture ELISA. Vet Microbiol 34 (1993) 233-248
16. Dewulf J., Koenen F., Mintiens K., Denis P., Ribbens S., and de Kruif A. Analytical performance of several classical swine fever laboratory diagnostic techniques on live animals for detection of infection. J Virol Methods 119 (2004) 137-143
17. Handel K., Kehler H., Hills K., and Pasick J. Comparison of reverse transcriptase-polymerase chain reaction, virus isolation, and immunoperoxidase assays for detecting pigs infected with low, moderate, and high virulent strains of classical swine fever virus. J Vet Diagn Invest 16 (2004) 132-138
18. Harding M., Lutze-Wallace C., Homme I., Zhong X., and Rola J. Reverse transcriptase-PCR assay for detection of hog cholera virus. J Clin Microbiol 32 (1994) 2600-2602
19. Katz J.B., Ridpath J.F., and Bolin S.R. Presumptive diagnostic differentiation of hog cholera virus from bovine viral diarrhea and border disease viruses by using a cDNA nested-amplification approach. J Clin Microbiol 31 (1993) 565-568
20. Liu S.T., Li S.N., Wang D.C., Chang S.F., Chiang S.C., Ho W.C., et al. Rapid detection of hog cholera virus in tissues by the polymerase chain reaction. J Virol Methods 35 (1991) 227-236
21. Risatti G.R., Callahan J.D., Nelson W.M., and Borca M.V. Rapid detection of classical swine fever virus by a portable real-time reverse transcriptase PCR assay. J Clin Microbiol 41 (2003) 500-505
22. Notomi T., Okayama H., Masubuchi H., Yonekawa T., Watanabe K., Amino N., et al. Loop mediated isothermal amplification of DNA. Nucleic Acids Res 28 (2000) e63
23. Parida M.M., Santhosh S.R., Dash P.K., Tripathi N.K., Saxena P., Ambuj S., et al. Development and Evaluation of Reverse Transcription-Loop-Mediated Isothermal Amplification Assay for Rapid and Real-Time Detection of Japanese Encephalitis Virus. J Clin Microbiol 44 (2006) 4172-4178
24. Poon L.L.M., Leung C.S.W., Chan K.H., Lee J.H.C., Yuen K.Y., Guan Y., et al. Detection of Human Influenza A Viruses by Loop-Mediated Isothermal Amplification. J Clin Microbiol 43 (2005) 427-430
25. Hong T.C., Mai Q.L., Cuong D.V., Parida M., Minekawa H., Notomi T., et al. Development and evaluation of a novel loop-mediated isothermal amplification method for rapid detection of severe acute respiratory syndrome coronavirus. J Clin Microbiol 43 (2004) 1956-1961
26. Krumbholz A., Wurm R., Scheck O., Birch-Hirschfeld E., Egerer R., Henke A., et al. Detection of porcine teschoviruses and enteroviruses by LightCycler real-time PCR. J Virol Methods 113 (2003) 51-63
27. Yang Z.Z., Fang W.H., and Habib M. First results of detection of PRRSV and CSFV RNA by SYBR Green I-based quantitative PCR. J Vet Med B Infect Dis Vet Public Health 53 (2006) 461-467
28. Rovira A., Balasch M., Segales J., Garcia L., Plana-Duran J., and Rosell C. Experimental inoculation of conventional pigs with porcine reproductive and respiratory syndrome virus and porcine circovirus 2. J Virol 76 (2002) 3232-3239
29. Ellis J.A., Bratanich A., Clark E.G., Allan G., Meehan B., Haines D.M., et al. Coinfection by porcine circoviruses and porcine parvovirus in pigs with naturally acquired postweaning multisystemic wasting syndrome. J Vet Diagn Invest 12 (2000) 21-27
30. Rodriguez A.G.M., Segales J., Rosell C., Quintana J., Ayllon S., Camprodon A., et al. Aujeszky's disease virus infection concurrent with postweaning multisystemic wasting syndrome in pigs. Vet Rec 144 (1999) 152-153
31. Iwamoto T., Sonobe T., and Hayashi K. Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis Complex, M. avium, and M. intracellulare in Sputum Samples. J Clin Microbiol 41 (2003) 2616-2622
32. Chen H.T., Zhang J., Sun D.H., Chu Y.F., Cai X.P., Liu X.T., et al. Rapid detection of porcine circovirus type 2 by loop-mediated isothermal amplification. J Virol Methods 149 (2008) 264-268
33. Okafuji T., Yoshida N., Fujino M., Motegi Y., Ihara T., Ota Y., et al. Rapid diagnostic method for detection of mumps virus genome by loop-mediated isothermal amplification. J Clin Microbiol 43 (2005) 1625-1631
34. Parida M., Posadas G., Inoue S., Hasebe F., and Morita K. Real-time reverse transcription loop-mediated isothermal amplification for rapid detection of west Nile virus. J Clin Microbiol 42 (2004) 257-263
35. Kosmidou A., Buttner M., and Meyers G. Isolation and characterization of cytopathogenic classical swine fever virus (CSFV). Arch Virol 143 (1998) 1295-1309
36. Ralph J.A.O.O., Chris J.M., and David B.B. Detection and quantitative pathogenesis study of classical swine fever virus using a real time RT-PCR assay. J Virol Methods 131 (2006) 78-85