메뉴 건너뛰기




Volumn 10, Issue , 2009, Pages

STAMP: Extensions to the STADEN sequence analysis package for high throughput interactive microsatellite marker design

Author keywords

[No Author keywords available]

Indexed keywords

ANALYSIS SOFTWARES; AUTOMATED ANALYSIS; BACKBONE FUNCTIONALITIES; DEVELOPMENT PROJECT; INTERACTIVE DESIGN; MICROSATELLITE MARKERS; POPULATION GENETICS; TRANSPARENT SOLUTIONS;

EID: 60849104081     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-10-41     Document Type: Article
Times cited : (40)

References (23)
  • 2
    • 84874663552 scopus 로고    scopus 로고
    • Project homepage http://www.awi.de/en/go/bioinformatics
    • Project Homepage
  • 3
    • 0347358913 scopus 로고    scopus 로고
    • The evolution of molecular markers - Just a matter of fashion?
    • 10.1038/nrg1249 14666112
    • Schlötterer C The evolution of molecular markers - just a matter of fashion? Nat Rev Genet 2004, 5:63-69 10.1038/nrg1249 14666112
    • (2004) Nat Rev Genet , vol.5 , pp. 63-69
    • Schlötterer, C.1
  • 4
    • 36849035794 scopus 로고    scopus 로고
    • Msatcommander: Detection of microsatellite repeat arrays and automated, locus-specific primer design
    • 10.1111/j.1471-8286.2007.01884.x
    • Faircloth BC Msatcommander: Detection of microsatellite repeat arrays and automated, locus-specific primer design Mol Ecol Res 2008, 8:92-94 10.1111/j.1471-8286.2007.01884.x
    • (2008) Mol Ecol Res , vol.8 , pp. 92-94
    • Faircloth, B.C.1
  • 5
    • 32944478061 scopus 로고    scopus 로고
    • read2Marker: A data processing tool for microsatellite marker development from a large data set
    • 10.2144/000112025 16235557
    • Fukuoka H Nunome T Minamiyama Y Kono I Namiki N Kojima A read2Marker: A data processing tool for microsatellite marker development from a large data set BioTechniques 2005, 39:472-476 10.2144/000112025 16235557
    • (2005) BioTechniques , vol.39 , pp. 472-476
    • Fukuoka, H.1    Nunome, T.2    Minamiyama, Y.3    Kono, I.4    Namiki, N.5    Kojima, A.6
  • 7
    • 2942553229 scopus 로고    scopus 로고
    • Simple sequence repeat marker loci discovery using SSR primer
    • 10.1093/bioinformatics/bth104 14962913
    • Robinson AJ Love CG Batley J Barker G Edwards D Simple sequence repeat marker loci discovery using SSR primer Bioinformatics 2004, 20:1475 10.1093/bioinformatics/bth104 14962913
    • (2004) Bioinformatics , vol.20 , pp. 1475
    • Robinson, A.J.1    Love, C.G.2    Batley, J.3    Barker, G.4    Edwards, D.5
  • 9
    • 38649113914 scopus 로고    scopus 로고
    • SAT, a flexible and optimized Web application for SSR marker development
    • 2216045 18047663 10.1186/1471-2105-8-465
    • Dereeper A Argout X Billot C Rami J-F Ruiz M SAT, a flexible and optimized Web application for SSR marker development BMC Bioinformatics 2007, 8:465 2216045 18047663 10.1186/1471-2105-8-465
    • (2007) BMC Bioinformatics , vol.8 , pp. 465
    • Dereeper, A.1    Argout, X.2    Billot, C.3    Rami, J.-F.4    Ruiz, M.5
  • 10
    • 0034520094 scopus 로고    scopus 로고
    • Microsatellite characterization in central stoneroller Campostoma anomalum (Pisces: Cyprinidae)
    • 10.1046/j.1365-294X.2000.105318.x 11123646
    • Dimsoski P Toth GP Bagley MJ Microsatellite characterization in central stoneroller Campostoma anomalum (Pisces: Cyprinidae) Mol Ecol 2000, 9:2187-2189 10.1046/j.1365-294X.2000.105318.x 11123646
    • (2000) Mol Ecol , vol.9 , pp. 2187-2189
    • Dimsoski, P.1    Toth, G.P.2    Bagley, M.J.3
  • 11
    • 0036718239 scopus 로고    scopus 로고
    • Homoplasy and mutation model at microsatellite loci and their consequences for population genetic analysis
    • 10.1046/j.1365-294X.2002.01576.x 12207711
    • Estoup A Jarne P Cornuet JM Homoplasy and mutation model at microsatellite loci and their consequences for population genetic analysis Mol Ecol 2002, 11:1591-1604 10.1046/j.1365-294X.2002.01576.x 12207711
    • (2002) Mol Ecol , vol.11 , pp. 1591-1604
    • Estoup, A.1    Jarne, P.2    Cornuet, J.M.3
  • 12
    • 33645894192 scopus 로고    scopus 로고
    • Microsatellites for ecologists: A practical guide to using and evaluating microsatellite markers
    • 10.1111/j.1461-0248.2006.00889.x 16643306
    • Selkoe KA Toonen RJ Microsatellites for ecologists: A practical guide to using and evaluating microsatellite markers Ecol Lett 2006, 9:615-629 10.1111/j.1461-0248.2006.00889.x 16643306
    • (2006) Ecol Lett , vol.9 , pp. 615-629
    • Selkoe, K.A.1    Toonen, R.J.2
  • 13
    • 4344678918 scopus 로고    scopus 로고
    • The impact of microsatellite electromorph size homoplasy on multilocus population structure estimates in a tropical tree (Corythophora alta) and an anadromous fish (Morone saxatilis)
    • 10.1111/j.1365-294X.2004.02256.x 15315672
    • Adams RI Brown KM Hamilton MB The impact of microsatellite electromorph size homoplasy on multilocus population structure estimates in a tropical tree (Corythophora alta) and an anadromous fish (Morone saxatilis) Mol Ecol 2004, 13:2579-2588 10.1111/j.1365-294X.2004.02256.x 15315672
    • (2004) Mol Ecol , vol.13 , pp. 2579-2588
    • Adams, R.I.1    Brown, K.M.2    Hamilton, M.B.3
  • 18
    • 47249144118 scopus 로고    scopus 로고
    • Isolation and characterization of microsatellite markers from the marine isopods Serolis paradoxa and Septemserolis septemcarinata (Crustacea: Peracarida)
    • 10.1111/j.1755-0998.2007.02078.x
    • Leese F Kop A Agrawal S Held C Isolation and characterization of microsatellite markers from the marine isopods Serolis paradoxa and Septemserolis septemcarinata (Crustacea: Peracarida) Mol Ecol Res 2008, 8:818-821 10.1111/j.1755-0998.2007.02078.x
    • (2008) Mol Ecol Res , vol.8 , pp. 818-821
    • Leese, F.1    Kop, A.2    Agrawal, S.3    Held, C.4
  • 19
    • 27644496090 scopus 로고    scopus 로고
    • Direct cloning of microsatellite loci from Cottus gobio through a simplified enrichment procedure
    • 10.1111/j.1471-8286.2005.01026.x
    • Nolte AW Stemshorn KC Tautz D Direct cloning of microsatellite loci from Cottus gobio through a simplified enrichment procedure Mol Ecol Notes 2005, 5:628-636 10.1111/j.1471-8286.2005.01026.x
    • (2005) Mol Ecol Notes , vol.5 , pp. 628-636
    • Nolte, A.W.1    Stemshorn, K.C.2    Tautz, D.3
  • 20
    • 55149092956 scopus 로고    scopus 로고
    • Isolation of microsatellites from unknown genomes using known genomes as enrichment templates
    • Leese F Mayer C Held C Isolation of microsatellites from unknown genomes using known genomes as enrichment templates Limnol Oceanogr Meth 2008, 6:412-426
    • (2008) Limnol Oceanogr Meth , vol.6 , pp. 412-426
    • Leese, F.1    Mayer, C.2    Held, C.3
  • 21
    • 0030015122 scopus 로고    scopus 로고
    • Microsatellite libraries enriched for several microsatellite sequences in plants
    • 8723911
    • Edwards KJ Barker JHA Daly A Jones C Karp A Microsatellite libraries enriched for several microsatellite sequences in plants BioTechniques 1996, 20:758-760 8723911
    • (1996) BioTechniques , vol.20 , pp. 758-760
    • Edwards, K.J.1    Barker, J.H.A.2    Daly, A.3    Jones, C.4    Karp, A.5
  • 22
    • 1342267271 scopus 로고    scopus 로고
    • Microsatellite markers for the cosmopolitan marine diatom Pseudo-nitzschia pungens
    • 10.1111/j.1471-8286.2004.00591.x
    • Evans KM Hayes PK Microsatellite markers for the cosmopolitan marine diatom Pseudo-nitzschia pungens Mol Ecol Notes 2004, 4:125-126 10.1111/ j.1471-8286.2004.00591.x
    • (2004) Mol Ecol Notes , vol.4 , pp. 125-126
    • Evans, K.M.1    Hayes, P.K.2
  • 23
    • 34248596038 scopus 로고    scopus 로고
    • Methods used to reveal genetic diversity in the colony forming prymnesiophytes Phaeocystis antarctica, P. globosa and P. pouchetii - Preliminary results
    • 10.1007/s10533-007-9084-4
    • Gaebler S Hayes PK Medlin LK Methods used to reveal genetic diversity in the colony forming prymnesiophytes Phaeocystis antarctica, P. globosa and P. pouchetii - preliminary results Biogeochemistry 2007, 83:19-27 10.1007/s10533-007-9084-4
    • (2007) Biogeochemistry , vol.83 , pp. 19-27
    • Gaebler, S.1    Hayes, P.K.2    Medlin, L.K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.