-
1
-
-
85087583426
-
-
Chipping forecast
-
Chipping forecast (2002) Nature Genet., 32 (Suppl.), 461-552.
-
(2002)
Nature Genet.
, vol.32
, Issue.SUPPL.
, pp. 461-552
-
-
-
2
-
-
0034927555
-
Analysis of variance for gene expression microarray data
-
Kerr,M.K., Martin,M. and Churchill,G,A. (2000) Analysis of variance for gene expression microarray data. J. Comput. Biol., 7, 819-837.
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 819-837
-
-
Kerr, M.K.1
Martin, M.2
Churchill, G.A.3
-
3
-
-
0034656561
-
Normalization strategies for cDNA microarrays
-
Schuchhardt,J., Beule,D., Malik,A., Wolski,E., Eickhoff,H., Lehrach,H. and Herzel,H. (2000) Normalization strategies for cDNA microarrays. Nucleic Acids Res., 28, E47.
-
(2000)
Nucleic Acids Res.
, vol.28
-
-
Schuchhardt, J.1
Beule, D.2
Malik, A.3
Wolski, E.4
Eickhoff, H.5
Lehrach, H.6
Herzel, H.7
-
4
-
-
0003576795
-
Comparison of methods for image analysis on cDNA microarray data
-
Technical Report 107, Department of Statistics, University of California, Berkley, CA
-
Yang,Y.H., Buckley,M.J., Dudoit,S. and Speed,T. (2000) Comparison of methods for image analysis on cDNA microarray data. Technical Report 107, Department of Statistics, University of California, Berkley, CA.
-
(2000)
-
-
Yang, Y.H.1
Buckley, M.J.2
Dudoit, S.3
Speed, T.4
-
6
-
-
0034730124
-
Importance of replication in microarray gene expression studies: Statistical methods and evidence from repetitive cDNA hybridizations
-
Lee,M.L., Kuo,F.C., Whitmore,G.A. and Sklar,J. (2000) Importance of replication in microarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridizations. Proc. Natl Acad. Sci. USA, 97, 9834-9839.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 9834-9839
-
-
Lee, M.L.1
Kuo, F.C.2
Whitmore, G.A.3
Sklar, J.4
-
7
-
-
0036738906
-
Determination of minimal sample size and discriminatory expression patterns in microarray data
-
Hwang,D., Schmitt,W.A. and Stephanopoulos,G. (2002) Determination of minimal sample size and discriminatory expression patterns in microarray data. Bioinformatics, 18, 1184-1193.
-
(2002)
Bioinformatics
, vol.18
, pp. 1184-1193
-
-
Hwang, D.1
Schmitt, W.A.2
Stephanopoulos, G.3
-
8
-
-
0036051492
-
How many replicates of arrays are required to detect gene expression changes in microarray experiments? A mixture model approach
-
research
-
Pan,W., Lin,J. and Le,C.T. (2002) How many replicates of arrays are required to detect gene expression changes in microarray experiments? A mixture model approach. Genome Biol., 3, research 0022.
-
(2002)
Genome Biol.
, vol.3
, pp. 0022
-
-
Pan, W.1
Lin, J.2
Le, C.T.3
-
9
-
-
0141626917
-
The effect of replication on gene expression microarray experiments
-
Pavlidis,P., Li,Q. and NobleW.S. (2003) The effect of replication on gene expression microarray experiments. Bioinformatics 19, 1620-1627.
-
(2003)
Bioinformatics
, vol.19
, pp. 1620-1627
-
-
Pavlidis, P.1
Li, Q.2
Noble, W.S.3
-
10
-
-
0033990298
-
Large-scale analysis of differential gene expression in the hindlimb muscles and diaphragm of mdx mouse
-
Tkatchenko,A.V., Le Cam,G., Leger,J.J. and Dechesne,C.A. (2000) Large-scale analysis of differential gene expression in the hindlimb muscles and diaphragm of mdx mouse. Biochim. Biophys. Acta 1500, 17-30.
-
(2000)
Biochim. Biophys. Acta
, vol.1500
, pp. 17-30
-
-
Tkatchenko, A.V.1
Le Cam, G.2
Leger, J.J.3
Dechesne, C.A.4
-
11
-
-
0034753393
-
Analysis of altered gene expression in rat soleus muscle atrophied by disuse
-
Cros,N., Tkatchenko,A.V., Pisani,D.F., Leclerc,L., Leger,J.J., Marini,J.F. and Dechesne,C.A. (2001) Analysis of altered gene expression in rat soleus muscle atrophied by disuse. J. Cell. Biochem. 83, 508-51.
-
(2001)
J. Cell. Biochem.
, vol.83
, pp. 508-551
-
-
Cros, N.1
Tkatchenko, A.V.2
Pisani, D.F.3
Leclerc, L.4
Leger, J.J.5
Marini, J.F.6
Dechesne, C.A.7
-
12
-
-
0037440229
-
Transcriptomal analysis of failing and nonfailing human hearts
-
Steenman,M., Chen,Y.W., Le Cunff,M., Lamirault,G., Varro,A., Hoffman,E. and Leger,J.J. (2003) Transcriptomal analysis of failing and nonfailing human hearts. Physiol. Genomics, 12, 97-112.
-
(2003)
Physiol. Genomics
, vol.12
, pp. 97-112
-
-
Steenman, M.1
Chen, Y.W.2
Le Cunff, M.3
Lamirault, G.4
Varro, A.5
Hoffman, E.6
Leger, J.J.7
-
13
-
-
13444291523
-
Distinct molecular portraits of human failing hearts identified by dedicated cDNA microarrays
-
in press, doi:10.1016/j.ejheart.2004.05.008
-
Steenman,M., Lamirault,G., Le Meur,N., Le Cunff,M., Escande,D. and Léger,J.J. (2004) Distinct molecular portraits of human failing hearts identified by dedicated cDNA microarrays. Eur. J. Heart Fail., in press, doi:10.1016/j.ejheart.2004.05.008.
-
(2004)
Eur. J. Heart Fail.
-
-
Steenman, M.1
Lamirault, G.2
Le Meur, N.3
Le Cunff, M.4
Escande, D.5
Léger, J.J.6
-
14
-
-
0030305457
-
R: A language for data analysis and graphics
-
Ihaka,R. and Gentleman,R. (1996) R: a language for data analysis and graphics. J. Comput. Graph. Stat., 5, 299-314.
-
(1996)
J. Comput. Graph. Stat.
, vol.5
, pp. 299-314
-
-
Ihaka, R.1
Gentleman, R.2
-
15
-
-
0002294347
-
Simple sequentially rejective multiple test procedure
-
Holm,S. (1979) Simple sequentially rejective multiple test procedure. Scand. J. Stat., 6, 65-70.
-
(1979)
Scand. J. Stat.
, vol.6
, pp. 65-70
-
-
Holm, S.1
-
16
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
Tusher,V.G., Tibshirani,R. and Chu,G. (2001) Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl Acad. Sci. USA, 98, 5116-5120.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 5116-5120
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
18
-
-
18344396568
-
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data
-
Brazma,A., Hingamp,P., Quackenbush,J., Sherlock,G., Spellman,P., Stoeckert,C., Aach,J., Ansorge,W., Ball,C.A., Causton,H.C., Gaasterland,T., Glenisson,P., Holstege,F.C., Kim,I.F., Markowitz,V., Matese,J.C., Parkinson,H., Robinson,A., Sarkans,U., Schulze-Kremer,S., Stewart,J., Taylor,R., Vilo,J. and Vingron,M. (2001) Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nature Genet., 29, 365-371.
-
(2001)
Nature Genet.
, vol.29
, pp. 365-371
-
-
Brazma, A.1
Hingamp, P.2
Quackenbush, J.3
Sherlock, G.4
Spellman, P.5
Stoeckert, C.6
Aach, J.7
Ansorge, W.8
Ball, C.A.9
Causton, H.C.10
Gaasterland, T.11
Glenisson, P.12
Holstege, F.C.13
Kim, I.F.14
Markowitz, V.15
Matese, J.C.16
Parkinson, H.17
Robinson, A.18
Sarkans, U.19
Schulze-Kremer, S.20
Stewart, J.21
Taylor, R.22
Vilo, J.23
Vingron, M.24
more..
-
19
-
-
0035875553
-
Issues in cDNA microarray analysis: Quality filtering, channel normalization, models of variations and assessment of gene effects
-
Tseng,G.C., Oh,M.K., Rohlin,L., Liao,J.C. and Wong,W.H. (2001) Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects. Nucleic Acids Res., 29, 2549-2557.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 2549-2557
-
-
Tseng, G.C.1
Oh, M.K.2
Rohlin, L.3
Liao, J.C.4
Wong, W.H.5
-
20
-
-
0035751799
-
Normalization for cDNA microarray data
-
Yang,Y.H., Dudoit,S., Luu,P. and Speed,T. (2001) Normalization for cDNA microarray data. Brief. Bioinformatics, 2, 341-349.
-
(2001)
Brief. Bioinformatics
, vol.2
, pp. 341-349
-
-
Yang, Y.H.1
Dudoit, S.2
Luu, P.3
Speed, T.4
-
21
-
-
1342294092
-
Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
-
Yang,Y.H., Dudoit,S., Luu,P., Lin,D.M., Peng,V., Ngai,I. and Speed,T.P. (2002) Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res., 30, e15.
-
(2002)
Nucleic Acids Res.
, vol.30
-
-
Yang, Y.H.1
Dudoit, S.2
Luu, P.3
Lin, D.M.4
Peng, V.5
Ngai, I.6
Speed, T.P.7
-
22
-
-
9144272961
-
Missing values, outliers, robust statistics & non-parametric methods. Statistics and data analysis
-
Burke,S. (2001) Missing values, outliers, robust statistics & non-parametric methods. Statistics and data analysis. Statistics and Data Analysis. LC.GC. Europe Online Supplement, 59, 19-24.
-
(2001)
Statistics and Data Analysis. LC.GC. Europe Online Supplement
, vol.59
, pp. 19-24
-
-
Burke, S.1
-
23
-
-
0038257796
-
Possible advantages of a robust evaluation of comparisons
-
Müller,J.W. (2000) Possible advantages of a robust evaluation of comparisons. J. Res. Natl Inst. Stand. Technol., 4, 551-555.
-
(2000)
J. Res. Natl. Inst. Stand. Technol.
, vol.4
, pp. 551-555
-
-
Müller, J.W.1
-
24
-
-
0031246430
-
Ratio-based decisions and the quantitative analysis of cDNA microarray images
-
Chen,Y., Dougherty,E. and Bittner,M. (1997) Ratio-based decisions and the quantitative analysis of cDNA microarray images. J. Biomed. Opt., 2, 364-374.
-
(1997)
J. Biomed. Opt.
, vol.2
, pp. 364-374
-
-
Chen, Y.1
Dougherty, E.2
Bittner, M.3
-
25
-
-
1842777019
-
VARAN: A web server for VARiability ANalysis of DNA microarray experiments
-
Golfier,G., Tran,D.M., Dauphinot,L., Graison,E., Rossier,J. and Potier,M.C. (2004) VARAN: a web server for VARiability ANalysis of DNA microarray experiments. Bioinformatics, 20, 1641-1643.
-
(2004)
Bioinformatics
, vol.20
, pp. 1641-1643
-
-
Golfier, G.1
Tran, D.M.2
Dauphinot, L.3
Graison, E.4
Rossier, J.5
Potier, M.C.6
-
26
-
-
9144240190
-
Experimental design to make the most of microarray studies
-
Kerr,M.K. (2003) Experimental design to make the most of microarray studies. Methods Mol. Biol., 224, 137-147.
-
(2003)
Methods Mol. Biol.
, vol.224
, pp. 137-147
-
-
Kerr, M.K.1
-
27
-
-
2442660427
-
Bioinformatics: Smartest software is still just a tool
-
Bottomley,S. (2004) Bioinformatics: smartest software is still just a tool. Nature, 429, 241.
-
(2004)
Nature
, vol.429
, pp. 241
-
-
Bottomley, S.1
-
28
-
-
11144355607
-
Transcriptome variations in human Caco-2 cells: A model for enterocyte differentiation and its link to iron absorption
-
Bédrine-Ferran,H., Le Meur,N., Gicquel,I., Le Cunff,M., Soriano,N., Guisle,I., Mottier,S., Monnier A., Teusan,R., Fergelot,P., Le Gall,J.Y., Leger,J.J. and Mosser,J.. (2004) Transcriptome variations in human Caco-2 cells: a model for enterocyte differentiation and its link to iron absorption. Genomics, 83, 747-950.
-
(2004)
Genomics
, vol.83
, pp. 747-950
-
-
Bédrine-Ferran, H.1
Le Meur, N.2
Gicquel, I.3
Le Cunff, M.4
Soriano, N.5
Guisle, I.6
Mottier, S.7
Monnier, A.8
Teusan, R.9
Fergelot, P.10
Le Gall, J.Y.11
Leger, J.J.12
Mosser, J.13
-
29
-
-
0037099005
-
BioArray Software Environment (BASE): A platform for comprehensive management and analysis of microarray data
-
Saal,L.H., Troein,C., Vallon-Christersson,J., Gruvberger,S., Borg,A. and Peterson,C. (2002) BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data. Genome Biol., 3, SOFTWARE0003.
-
(2002)
Genome Biol.
, vol.3
-
-
Saal, L.H.1
Troein, C.2
Vallon-Christersson, J.3
Gruvberger, S.4
Borg, A.5
Peterson, C.6
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