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Volumn 75, Issue 4, 2009, Pages 991-997

Identification of freshwater Phycodnaviridae and their potential phytoplankton hosts, using DNA pol sequence fragments and a genetic-distance analysis

Author keywords

[No Author keywords available]

Indexed keywords

AQUATIC ECOSYSTEMS; DENATURING GRADIENT GEL ELECTROPHORESIS; DISTANCE ANALYSIS; DNA POLYMERASE; GENE FRAGMENTS; GENETIC DISTANCES; MONORAPHIDIUM SP; MULTIVARIATE STATISTICAL ANALYSIS; ONTARIO , CANADA; PHYLOGENETIC ANALYSIS; PHYLOGENETIC GROUPS; PHYTOPLANKTON SPECIES; SPECIFIC PRIMERS;

EID: 59949097832     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.02024-08     Document Type: Article
Times cited : (27)

References (31)
  • 1
    • 0024475207 scopus 로고
    • High abundance of viruses found in aquatic environments
    • Bergh, O., K. Y. Borsheim, G. Bratbak, and M. Heldal. 1989. High abundance of viruses found in aquatic environments. Nature 340:467-468.
    • (1989) Nature , vol.340 , pp. 467-468
    • Bergh, O.1    Borsheim, K.Y.2    Bratbak, G.3    Heldal, M.4
  • 2
    • 0027804112 scopus 로고
    • Viral mortality of the marine alga Emiliania huxleyi (Haptophyceae) and termination of algal blooms
    • Bratbak, G., J. K. Egge, and M. Heldal. 1993. Viral mortality of the marine alga Emiliania huxleyi (Haptophyceae) and termination of algal blooms. Mar. Ecol. Prog. Ser. 93:39-48.
    • (1993) Mar. Ecol. Prog. Ser , vol.93 , pp. 39-48
    • Bratbak, G.1    Egge, J.K.2    Heldal, M.3
  • 3
    • 1942441434 scopus 로고    scopus 로고
    • Viral control of phytoplankton populations - a review
    • Brussaard, C. P. D. 2004. Viral control of phytoplankton populations - a review. J. Eukaryot. Microbiol. 51:125-138.
    • (2004) J. Eukaryot. Microbiol , vol.51 , pp. 125-138
    • Brussaard, C.P.D.1
  • 4
    • 2942525125 scopus 로고    scopus 로고
    • Isolation and phylogenetic analysis of novel viruses infecting the phytoplankton Phaeocystis globosa (Prymnesiophyceae)
    • Brussaard, C. P. D., S. M. Short, C. M. Frederickson, and C. A. Suttle. 2004. Isolation and phylogenetic analysis of novel viruses infecting the phytoplankton Phaeocystis globosa (Prymnesiophyceae). Appl. Environ. Microbiol. 70: 3700-3705.
    • (2004) Appl. Environ. Microbiol , vol.70 , pp. 3700-3705
    • Brussaard, C.P.D.1    Short, S.M.2    Frederickson, C.M.3    Suttle, C.A.4
  • 6
    • 0028964507 scopus 로고
    • Amplification of DNA polymerase gene fragments from viruses infecting microalgae
    • Chen, F., and C. A. Suttle. 1995. Amplification of DNA polymerase gene fragments from viruses infecting microalgae. Appl. Environ. Microbiol. 61: 1274-1278.
    • (1995) Appl. Environ. Microbiol , vol.61 , pp. 1274-1278
    • Chen, F.1    Suttle, C.A.2
  • 7
    • 0029762609 scopus 로고    scopus 로고
    • Genetic diversity in marine algal virus communities as revealed by sequence analysis of DNA polymerase genes
    • Chen, F., C. A. Suttle, and S. M. Short. 1996. Genetic diversity in marine algal virus communities as revealed by sequence analysis of DNA polymerase genes. Appl. Environ. Microbiol. 62:2869-2874.
    • (1996) Appl. Environ. Microbiol , vol.62 , pp. 2869-2874
    • Chen, F.1    Suttle, C.A.2    Short, S.M.3
  • 8
    • 50949084124 scopus 로고    scopus 로고
    • Phylogenetic analysis of genes encoding photosynthesis proteins in cyanophage isolates and natural virus communities
    • Chenard, C., and C. A. Suttle. 2008. Phylogenetic analysis of genes encoding photosynthesis proteins in cyanophage isolates and natural virus communities. Appl. Environ. Microbiol. 74:5317-5324.
    • (2008) Appl. Environ. Microbiol , vol.74 , pp. 5317-5324
    • Chenard, C.1    Suttle, C.A.2
  • 9
    • 59949099382 scopus 로고    scopus 로고
    • Reference deleted
    • Reference deleted.
  • 10
    • 0001264433 scopus 로고
    • Results of initial survey of experimental lakes area, Northwestern Ontario
    • Cleugh, T. R., and B. W. Hauser. 1971. Results of initial survey of experimental lakes area, Northwestern Ontario. J. Fish. Res. Bd. Can. 28:129-137.
    • (1971) J. Fish. Res. Bd. Can , vol.28 , pp. 129-137
    • Cleugh, T.R.1    Hauser, B.W.2
  • 12
    • 0031410680 scopus 로고    scopus 로고
    • Gobler, C. J., D. A. Hutchins, N. S. Fisher, E. M. Cosper, and S. A. Sanudo-Wilhelmy. 1997. Release and bioavailability of C, N, P, Se and Fe following viral lysis of a marine chrysophyte. Limnol. Oceanogr. 42:1492-1504.
    • Gobler, C. J., D. A. Hutchins, N. S. Fisher, E. M. Cosper, and S. A. Sanudo-Wilhelmy. 1997. Release and bioavailability of C, N, P, Se and Fe following viral lysis of a marine chrysophyte. Limnol. Oceanogr. 42:1492-1504.
  • 13
    • 0028309407 scopus 로고
    • Viral mortality in the final stage of Heterosigma akashiwo (Raphidophyceae) red tide
    • Nagasaki, K., M. Ando, S. Itakura, I. Imai, and Y. Ishida. 1994. Viral mortality in the final stage of Heterosigma akashiwo (Raphidophyceae) red tide. J. Plankton Res. 16:1595-1599.
    • (1994) J. Plankton Res , vol.16 , pp. 1595-1599
    • Nagasaki, K.1    Ando, M.2    Itakura, S.3    Imai, I.4    Ishida, Y.5
  • 14
    • 0001961865 scopus 로고
    • Die beziehungen zwischen zooplankton und phytoplankton in See Erken
    • Nauwerck, A. 1963. Die beziehungen zwischen zooplankton und phytoplankton in See Erken. Symb. Bot. Ups. 17:1-163.
    • (1963) Symb. Bot. Ups , vol.17 , pp. 1-163
    • Nauwerck, A.1
  • 15
    • 33947238287 scopus 로고    scopus 로고
    • Rusch, D. B., A. L. Halpern, G. Sutton, K. B. Heidelberg, S. Williamson, S. Yooseph, D. Wu, J. A. Eisen, J. M. Hoffman, K. Remington, K. Beeson, B. Tran, H. Smith, H. Baden-Tillson, C. Stewart, J. Thorpe, J. Freeman, C. Andrews-Pfannkoch, J. E. Venter, K. Li, S. Kravitz, J. F. Heidelberg, T. Utterback, Y.-H. Rogers, L. I. Falcón, V. Souza, G. Bonilla-Rosso, L. E. Eguiarte, D. M. Karl, S. Sathyendranath, T. Platt, E. Bermingham, V. Gallardo, G. Tamayo-Castillo, M. R. Ferrari, R. L. Strausberg, K. Nealson, R. Friedman, M. Frazier, and J. C. Venter. 2007. The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific. PLoS Biol. 5:398-431.
    • Rusch, D. B., A. L. Halpern, G. Sutton, K. B. Heidelberg, S. Williamson, S. Yooseph, D. Wu, J. A. Eisen, J. M. Hoffman, K. Remington, K. Beeson, B. Tran, H. Smith, H. Baden-Tillson, C. Stewart, J. Thorpe, J. Freeman, C. Andrews-Pfannkoch, J. E. Venter, K. Li, S. Kravitz, J. F. Heidelberg, T. Utterback, Y.-H. Rogers, L. I. Falcón, V. Souza, G. Bonilla-Rosso, L. E. Eguiarte, D. M. Karl, S. Sathyendranath, T. Platt, E. Bermingham, V. Gallardo, G. Tamayo-Castillo, M. R. Ferrari, R. L. Strausberg, K. Nealson, R. Friedman, M. Frazier, and J. C. Venter. 2007. The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific. PLoS Biol. 5:398-431.
  • 16
    • 59949093834 scopus 로고
    • Two devices for obtaining water samples integrated over depth. Can. Fish. Mar. Serv
    • Tech. Rep
    • Shearer, J. A. 1978. Two devices for obtaining water samples integrated over depth. Can. Fish. Mar. Serv. Tech. Rep. 772:1-10.
    • (1978) , vol.772 , pp. 1-10
    • Shearer, J.A.1
  • 17
    • 12244252269 scopus 로고    scopus 로고
    • Nearly identical bacteriophage structural gene sequences are widely distributed in both marine and freshwater environments
    • Short, C. M., and C. A. Suttle. 2005. Nearly identical bacteriophage structural gene sequences are widely distributed in both marine and freshwater environments. Appl. Environ. Microbiol. 71:480-486.
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 480-486
    • Short, C.M.1    Suttle, C.A.2
  • 18
    • 44649097577 scopus 로고    scopus 로고
    • Diversity of algal viruses in various North American freshwater environments
    • Short, S. M., and C. M. Short. 2008. Diversity of algal viruses in various North American freshwater environments. Aquat. Microb. Ecol. 51:13-21.
    • (2008) Aquat. Microb. Ecol , vol.51 , pp. 13-21
    • Short, S.M.1    Short, C.M.2
  • 19
    • 0036197501 scopus 로고    scopus 로고
    • Sequence analysis of marine virus communities reveals that groups of related algal viruses are widely distributed in nature
    • Short, S. M., and C. A. Suttle. 2002. Sequence analysis of marine virus communities reveals that groups of related algal viruses are widely distributed in nature. Appl. Environ. Microbiol. 68:1290-1296.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 1290-1296
    • Short, S.M.1    Suttle, C.A.2
  • 20
    • 0038489425 scopus 로고    scopus 로고
    • Temporal dynamics of natural communities of marine algal viruses and eukaryotes Aquat
    • Short, S. M., and C. A. Suttle. 2003. Temporal dynamics of natural communities of marine algal viruses and eukaryotes Aquat. Microb. Ecol. 32:107-119.
    • (2003) Microb. Ecol , vol.32 , pp. 107-119
    • Short, S.M.1    Suttle, C.A.2
  • 21
    • 0033133475 scopus 로고    scopus 로고
    • Use of the polymerase chain reaction and denaturing gradient gel electrophoresis to study diversity in natural virus communities
    • Short, S. M., and C. A. Suttle. 1999. Use of the polymerase chain reaction and denaturing gradient gel electrophoresis to study diversity in natural virus communities. Hydrobiologia 401:19-32.
    • (1999) Hydrobiologia , vol.401 , pp. 19-32
    • Short, S.M.1    Suttle, C.A.2
  • 22
    • 0001877368 scopus 로고    scopus 로고
    • Ecological, evolutionary, and geochemical consequences of viral infection of cyanobacteria and eukaryotic algae
    • C. J. Hurst ed, Academic Press, London, United Kingdom
    • Suttle, C. A. 2000. Ecological, evolutionary, and geochemical consequences of viral infection of cyanobacteria and eukaryotic algae, p. 247-296. In C. J. Hurst (ed.), Viral ecology. Academic Press, London, United Kingdom.
    • (2000) Viral ecology , pp. 247-296
    • Suttle, C.A.1
  • 23
    • 50949096845 scopus 로고    scopus 로고
    • Viral diversity and its implications for infection in the sea
    • F. Briand ed, CIESM, Monaco
    • Suttle, C. A. 2003. Viral diversity and its implications for infection in the sea, p. 73-76. In F. Briand (ed.), Ecology of marine viruses. CIESM Workshop Monographs 21. CIESM, Monaco.
    • (2003) Ecology of marine viruses. CIESM Workshop Monographs , vol.21 , pp. 73-76
    • Suttle, C.A.1
  • 24
    • 25144506135 scopus 로고    scopus 로고
    • Viruses in the sea
    • Suttle, C. A. 2005. Viruses in the sea. Nature 437:356-361.
    • (2005) Nature , vol.437 , pp. 356-361
    • Suttle, C.A.1
  • 25
    • 34548792911 scopus 로고    scopus 로고
    • Marine viruses - major players in the global ecosystem
    • Suttle, C. A. 2007. Marine viruses - major players in the global ecosystem. Nat. Rev. Microbiol. 5:801-812.
    • (2007) Nat. Rev. Microbiol , vol.5 , pp. 801-812
    • Suttle, C.A.1
  • 26
    • 0025919217 scopus 로고
    • Use of ultrafiltration to isolate viruses from seawater which are pathogens of marine phytoplankton
    • Suttle, C. A., A. M. Chan, and M. T. Cottrell. 1991. Use of ultrafiltration to isolate viruses from seawater which are pathogens of marine phytoplankton. Appl. Environ. Microbiol. 57:721-726.
    • (1991) Appl. Environ. Microbiol , vol.57 , pp. 721-726
    • Suttle, C.A.1    Chan, A.M.2    Cottrell, M.T.3
  • 27
    • 0000954448 scopus 로고
    • Zur Vervollkommnung der quantitativen Phytoplankton-Methodik.
    • Utermöhl, H. 1958. Zur Vervollkommnung der quantitativen Phytoplankton-Methodik. Mitt. Int. Verein. Theor. Angew. Limnol. 9:1-38.
    • (1958) Mitt. Int. Verein. Theor. Angew. Limnol , vol.9 , pp. 1-38
    • Utermöhl, H.1
  • 28
    • 0032858844 scopus 로고    scopus 로고
    • Viruses and nutrient cycles in the sea
    • Wilhelm, S. W., and C. A. Suttle. 1999. Viruses and nutrient cycles in the sea. Bioscience 49:781-788.
    • (1999) Bioscience , vol.49 , pp. 781-788
    • Wilhelm, S.W.1    Suttle, C.A.2
  • 30
    • 33645865546 scopus 로고    scopus 로고
    • Phylogenetic analysis of PgV-102P, a new virus from the English Channel that infects Phaeocystis globosa
    • Wilson, W. H., D. C. Schroeder, J. Ho, and M. Canty. 2006. Phylogenetic analysis of PgV-102P, a new virus from the English Channel that infects Phaeocystis globosa. J. Mar. Biol. Assoc. U.K. 86:485-490.
    • (2006) J. Mar. Biol. Assoc. U.K , vol.86 , pp. 485-490
    • Wilson, W.H.1    Schroeder, D.C.2    Ho, J.3    Canty, M.4
  • 31
    • 0034053843 scopus 로고    scopus 로고
    • Virioplankton: Viruses in aquatic ecosystems
    • Wommack, K. E., and R. R. Colwell. 2000. Virioplankton: viruses in aquatic ecosystems. Microbiol. Mol. Biol. Rev. 64:69-114.
    • (2000) Microbiol. Mol. Biol. Rev , vol.64 , pp. 69-114
    • Wommack, K.E.1    Colwell, R.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.