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Volumn 329, Issue 1-2, 2009, Pages 201-208

Elongational flow model for transmission of supercoiled plasmid DNA during membrane ultrafiltration

Author keywords

DNA elongation; Plasmid DNA; Sieving coefficient; Ultrafiltration; Viscosity

Indexed keywords

BUFFER SOLUTIONS; CONVERGING FLOWS; DIFFERENT SIZES; DNA ELONGATION; DNA MOLECULES; ELONGATIONAL FLOWS; GLUCOSE CONCENTRATIONS; MEMBRANE PORE SIZES; MEMBRANE PORES; MEMBRANE ULTRAFILTRATION; NEW MODELS; OPERATING TEMPERATURES; PERSISTENCE LENGTHS; PLASMID DNA; PLASMID SIZES; REGENERATED CELLULOSE; SIEVING COEFFICIENT; SOLUTION VISCOSITIES; STIRRED ULTRAFILTRATION CELLS; SUPERCOILED; THEORETICAL MODELS; ULTRA-FILTRATION MEMBRANES;

EID: 59849100290     PISSN: 03767388     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.memsci.2008.12.045     Document Type: Article
Times cited : (31)

References (40)
  • 2
    • 59849100648 scopus 로고    scopus 로고
    • Merial, USDA grants conditional approval for first therapeutic vaccine to treat cancer, 2007.
    • Merial, USDA grants conditional approval for first therapeutic vaccine to treat cancer, 2007.
  • 4
    • 6344285524 scopus 로고    scopus 로고
    • Capacity challenges in chromatography-based purification of plasmid DNA
    • Rathore A.S., and Velayudhan A. (Eds), Marcel Dekker, Inc., New York
    • Sagar S., Watson M.P., Lee A., and Chau Y.G. Capacity challenges in chromatography-based purification of plasmid DNA. In: Rathore A.S., and Velayudhan A. (Eds). Scale-up and Optimization in Preparative Chromatography (2003), Marcel Dekker, Inc., New York 251-272
    • (2003) Scale-up and Optimization in Preparative Chromatography , pp. 251-272
    • Sagar, S.1    Watson, M.P.2    Lee, A.3    Chau, Y.G.4
  • 7
    • 7744222633 scopus 로고    scopus 로고
    • Integrated process for purification of plasmid DNA using aqueous two-phase systems combined with membrane filtration and lid-bead chromatography
    • Kepka C., Lemmens R., Vasi J., Nyhammar T., and Gustavsson P.-E. Integrated process for purification of plasmid DNA using aqueous two-phase systems combined with membrane filtration and lid-bead chromatography. J. Chromatogr. A 1057 (2004) 115-124
    • (2004) J. Chromatogr. A , vol.1057 , pp. 115-124
    • Kepka, C.1    Lemmens, R.2    Vasi, J.3    Nyhammar, T.4    Gustavsson, P.-E.5
  • 8
    • 34047259016 scopus 로고    scopus 로고
    • Flux-dependent transmission of supercoiled plasmid DNA through ultrafiltration membranes
    • Latulippe D.R., Ager K., and Zydney A.L. Flux-dependent transmission of supercoiled plasmid DNA through ultrafiltration membranes. J. Membr. Sci. 294 (2007) 169-177
    • (2007) J. Membr. Sci. , vol.294 , pp. 169-177
    • Latulippe, D.R.1    Ager, K.2    Zydney, A.L.3
  • 9
    • 38449109713 scopus 로고    scopus 로고
    • Salt-induced changes in plasmid DNA transmission through ultrafiltration membranes
    • Latulippe D.R., and Zydney A.L. Salt-induced changes in plasmid DNA transmission through ultrafiltration membranes. Biotechnol. Bioeng. 99 (2008) 390-398
    • (2008) Biotechnol. Bioeng. , vol.99 , pp. 390-398
    • Latulippe, D.R.1    Zydney, A.L.2
  • 10
    • 0001704167 scopus 로고
    • Flows of flexible polymer solutions in pores
    • Daoudi S., and Brochard F. Flows of flexible polymer solutions in pores. Macromolecules 11 (1978) 751-758
    • (1978) Macromolecules , vol.11 , pp. 751-758
    • Daoudi, S.1    Brochard, F.2
  • 12
    • 33745700023 scopus 로고    scopus 로고
    • Plasmid DNA processing for gene therapy and vaccination: studies on the membrane sterilisation filtration step
    • Kong S., Titchener-Hooker N., and Levy M.S. Plasmid DNA processing for gene therapy and vaccination: studies on the membrane sterilisation filtration step. J. Membr. Sci. 280 (2006) 824-831
    • (2006) J. Membr. Sci. , vol.280 , pp. 824-831
    • Kong, S.1    Titchener-Hooker, N.2    Levy, M.S.3
  • 13
  • 15
    • 42649138932 scopus 로고    scopus 로고
    • Influence of pH and ionic strength on transmission of plasmid DNA through ultrafiltration membranes
    • Arkhangelsky E., Steubing B., Ben-Dov E., Kushmaro A., and Gitis A. Influence of pH and ionic strength on transmission of plasmid DNA through ultrafiltration membranes. Desalination 227 (2008) 111-119
    • (2008) Desalination , vol.227 , pp. 111-119
    • Arkhangelsky, E.1    Steubing, B.2    Ben-Dov, E.3    Kushmaro, A.4    Gitis, A.5
  • 16
    • 0025363121 scopus 로고
    • Structure of plectonemically supercoiled DNA
    • Boles T.C., White J., and Cozzarelli H.N.R. Structure of plectonemically supercoiled DNA. J. Mol. Biol. 213 (1990) 931-951
    • (1990) J. Mol. Biol. , vol.213 , pp. 931-951
    • Boles, T.C.1    White, J.2    Cozzarelli, H.N.R.3
  • 17
    • 0031793539 scopus 로고    scopus 로고
    • Salt-dependent DNA superhelix diameter studied by small angle neutron scattering measurements and Monte Carlo simulations
    • Hammermann M., Brun N., Klenin K.V., May R., Toth K., and Langowski J. Salt-dependent DNA superhelix diameter studied by small angle neutron scattering measurements and Monte Carlo simulations. Biophys. J. 75 (1998) 3057-3063
    • (1998) Biophys. J. , vol.75 , pp. 3057-3063
    • Hammermann, M.1    Brun, N.2    Klenin, K.V.3    May, R.4    Toth, K.5    Langowski, J.6
  • 18
    • 0344219596 scopus 로고
    • Comparison of predicted Rouse-Zimm dynamics with observations for a 2311 base pair DNA fragment
    • Lewis R.J., and Pecora R. Comparison of predicted Rouse-Zimm dynamics with observations for a 2311 base pair DNA fragment. Macromolecules 19 (1986) 2074-2075
    • (1986) Macromolecules , vol.19 , pp. 2074-2075
    • Lewis, R.J.1    Pecora, R.2
  • 19
    • 0000579305 scopus 로고    scopus 로고
    • DNA persistence length revisited
    • Lu Y.J., Weers B., and Stellwagen N.C. DNA persistence length revisited. Biopolymers 61 (2002) 261-275
    • (2002) Biopolymers , vol.61 , pp. 261-275
    • Lu, Y.J.1    Weers, B.2    Stellwagen, N.C.3
  • 20
    • 0037265428 scopus 로고    scopus 로고
    • Dielectric properties of α-d-glucose aqueous solutions at 2450 MHz
    • Liao X.J., Raghavan G.S.V., Dai J.M., and Yaylayan V.A. Dielectric properties of α-d-glucose aqueous solutions at 2450 MHz. Food Res. Int. 36 (2003) 485-490
    • (2003) Food Res. Int. , vol.36 , pp. 485-490
    • Liao, X.J.1    Raghavan, G.S.V.2    Dai, J.M.3    Yaylayan, V.A.4
  • 21
    • 3342950726 scopus 로고
    • Comparison of the physicochemical properties of native DNA and sonicated DNA. II. Effect of sucrose solutions
    • Londos-Gagliardi D., Serros G., and Aubel-Sadron G. Comparison of the physicochemical properties of native DNA and sonicated DNA. II. Effect of sucrose solutions. J. Chim. Phys. Phys.-Chim. Biol. 68 (1971) 670-673
    • (1971) J. Chim. Phys. Phys.-Chim. Biol. , vol.68 , pp. 670-673
    • Londos-Gagliardi, D.1    Serros, G.2    Aubel-Sadron, G.3
  • 22
    • 24644440439 scopus 로고    scopus 로고
    • Controlling protein transport in ultrafiltration using small charged ligands
    • Rao S., and Zydney A.L. Controlling protein transport in ultrafiltration using small charged ligands. Biotechnol. Bioeng. 91 (2005) 733-742
    • (2005) Biotechnol. Bioeng. , vol.91 , pp. 733-742
    • Rao, S.1    Zydney, A.L.2
  • 24
    • 39549086017 scopus 로고    scopus 로고
    • Prediction of diffusion coefficients of plasmids
    • Prazeres D.M.F. Prediction of diffusion coefficients of plasmids. Biotechnol. Bioeng. 99 (2008) 1040-1044
    • (2008) Biotechnol. Bioeng. , vol.99 , pp. 1040-1044
    • Prazeres, D.M.F.1
  • 26
    • 0030844210 scopus 로고    scopus 로고
    • Salt effects on the structure and internal dynamics of superhelical DNAs studied by light scattering and Brownian dynamics
    • Hammermann M., Steinmaier C., Merlitz H., Kapp U., Waldeck W., Chirico G., and Langowski J. Salt effects on the structure and internal dynamics of superhelical DNAs studied by light scattering and Brownian dynamics. Biophys. J. 73 (1997) 2674-2687
    • (1997) Biophys. J. , vol.73 , pp. 2674-2687
    • Hammermann, M.1    Steinmaier, C.2    Merlitz, H.3    Kapp, U.4    Waldeck, W.5    Chirico, G.6    Langowski, J.7
  • 28
    • 0017875787 scopus 로고
    • Isolation and physical studies of the intact supercoiled, the open circular, and the linear forms of ColE1-plasmid DNA
    • Voordouw G., Kam Z., Borochov N., and Eisenberg H. Isolation and physical studies of the intact supercoiled, the open circular, and the linear forms of ColE1-plasmid DNA. Biophys. Chem. 8 (1978) 171-189
    • (1978) Biophys. Chem. , vol.8 , pp. 171-189
    • Voordouw, G.1    Kam, Z.2    Borochov, N.3    Eisenberg, H.4
  • 29
    • 0030130813 scopus 로고    scopus 로고
    • Light scattering studies of supercoiled and nicked DNA
    • Fishman D.M., and Patterson G.D. Light scattering studies of supercoiled and nicked DNA. Biopolymers 38 (1996) 535-552
    • (1996) Biopolymers , vol.38 , pp. 535-552
    • Fishman, D.M.1    Patterson, G.D.2
  • 30
    • 0033400838 scopus 로고    scopus 로고
    • Superhelical DNA studied by solution scattering and computer models
    • Langowski J., Hammermann M., Klenin K., May R., and Toth K. Superhelical DNA studied by solution scattering and computer models. Genetica 106 (1999) 49-55
    • (1999) Genetica , vol.106 , pp. 49-55
    • Langowski, J.1    Hammermann, M.2    Klenin, K.3    May, R.4    Toth, K.5
  • 31
    • 33947462664 scopus 로고
    • Light scattering from non-Gaussian chains
    • Benoit H., and Doty P. Light scattering from non-Gaussian chains. J. Phys. Chem. 57 (1953) 958-963
    • (1953) J. Phys. Chem. , vol.57 , pp. 958-963
    • Benoit, H.1    Doty, P.2
  • 32
    • 33751233867 scopus 로고    scopus 로고
    • The persistence length of DNA is reached from the persistence length of its null isomer through an internal electrostatic stretching force
    • Manning G.S. The persistence length of DNA is reached from the persistence length of its null isomer through an internal electrostatic stretching force. Biophys. J. 91 (2006) 3607-3616
    • (2006) Biophys. J. , vol.91 , pp. 3607-3616
    • Manning, G.S.1
  • 34
    • 4243189532 scopus 로고
    • Electrostatic persistence length of a wormlike polyelectrolyte
    • Skolnick J., and Fixman M. Electrostatic persistence length of a wormlike polyelectrolyte. Macromolecules 10 (1977) 944-948
    • (1977) Macromolecules , vol.10 , pp. 944-948
    • Skolnick, J.1    Fixman, M.2
  • 35
    • 84985644090 scopus 로고
    • Dependence of DNA conformation on the concentration of salt
    • Borochov N., Eisenberg H., and Kam Z. Dependence of DNA conformation on the concentration of salt. Biopolymers 20 (1981) 231-235
    • (1981) Biopolymers , vol.20 , pp. 231-235
    • Borochov, N.1    Eisenberg, H.2    Kam, Z.3
  • 36
    • 1842368477 scopus 로고    scopus 로고
    • Single polymer dynamics in an elongational flow
    • Perkins T.T., Smith D.E., and Chu S. Single polymer dynamics in an elongational flow. Science 276 (1997) 2016-2021
    • (1997) Science , vol.276 , pp. 2016-2021
    • Perkins, T.T.1    Smith, D.E.2    Chu, S.3
  • 37
    • 0842301419 scopus 로고    scopus 로고
    • Deformation of DNA molecules by hydrodynamic focusing
    • Wong P.K., Lee Y.-K., and Ho C.-M. Deformation of DNA molecules by hydrodynamic focusing. J. Fluid Mech. 497 (2003) 55-65
    • (2003) J. Fluid Mech. , vol.497 , pp. 55-65
    • Wong, P.K.1    Lee, Y.-K.2    Ho, C.-M.3
  • 38
    • 49649112706 scopus 로고    scopus 로고
    • Multiscale modeling of nucleic acids: insights into DNA flexibility
    • Bomble Y.J., and Case D.A. Multiscale modeling of nucleic acids: insights into DNA flexibility. Biopolymers 89 (2008) 722-731
    • (2008) Biopolymers , vol.89 , pp. 722-731
    • Bomble, Y.J.1    Case, D.A.2
  • 39
    • 0030297549 scopus 로고    scopus 로고
    • A specialized nucleosome modulates transcription factor access to a c-glabrata metal responsive promoter
    • Zhu Z.W., and Thiele D.J. A specialized nucleosome modulates transcription factor access to a c-glabrata metal responsive promoter. Cell 87 (1996) 459-470
    • (1996) Cell , vol.87 , pp. 459-470
    • Zhu, Z.W.1    Thiele, D.J.2
  • 40
    • 0023513912 scopus 로고
    • The structure of an oligo(dA) oligo(dT) tract and its biological implications
    • Nelson H.C.M., Finch J.T., Luisi B.F., and Klug A. The structure of an oligo(dA) oligo(dT) tract and its biological implications. Nature 330 (1987) 221-226
    • (1987) Nature , vol.330 , pp. 221-226
    • Nelson, H.C.M.1    Finch, J.T.2    Luisi, B.F.3    Klug, A.4


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