-
1
-
-
0019423856
-
Sequence and organization of the human mitochondrial genome
-
S Anderson AT Bankier BG Barrell MH de Bruijn AR Coulson J Drouin IC Eperon DP Nierlich BA Roe F Sanger PH Schreier AJ Smith R Staden IG Young 1981 Sequence and organization of the human mitochondrial genome Nature 290 457 465
-
(1981)
Nature
, vol.290
, pp. 457-465
-
-
Anderson, S.1
Bankier, A.T.2
Barrell, B.G.3
De Bruijn, M.H.4
Coulson, A.R.5
Drouin, J.6
Eperon, I.C.7
Nierlich, D.P.8
Roe, B.A.9
Sanger, F.10
Schreier, P.H.11
Smith, A.J.12
Staden, R.13
Young, I.G.14
-
3
-
-
10944251591
-
Repair and genetic consequences of endogenous DNA base damage in mammalian cells
-
DE Barnes T Lindahl 2004 Repair and genetic consequences of endogenous DNA base damage in mammalian cells Annu Rev Genet 38 445 476
-
(2004)
Annu Rev Genet
, vol.38
, pp. 445-476
-
-
Barnes, D.E.1
Lindahl, T.2
-
4
-
-
33644781709
-
Assessing the fidelity of ancient DNA sequences amplified from nuclear genes
-
J Binladen C Wiuf MT Gilbert M Bunce R Barnett G Larson AD Greenwood J Haile SY Ho AJ Hansen E Willerslev 2006 Assessing the fidelity of ancient DNA sequences amplified from nuclear genes Genetics 172 733 741
-
(2006)
Genetics
, vol.172
, pp. 733-741
-
-
Binladen, J.1
Wiuf, C.2
Gilbert, M.T.3
Bunce, M.4
Barnett, R.5
Larson, G.6
Greenwood, A.D.7
Haile, J.8
Ho, S.Y.9
Hansen, A.J.10
Willerslev, E.11
-
6
-
-
34848827224
-
Patterns of damage in genomic DNA sequences from a Neandertal
-
AW Briggs U Stenzel PL Johnson RE Green J Kelso K Prufer M Meyer J Krause MT Ronan M Lachmann S Pääbo 2007 Patterns of damage in genomic DNA sequences from a Neandertal Proc Natl Acad Sci USA 104 14616 14621
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 14616-14621
-
-
Briggs, A.W.1
Stenzel, U.2
Johnson, P.L.3
Green, R.E.4
Kelso, J.5
Prufer, K.6
Meyer, M.7
Krause, J.8
Ronan, M.T.9
Lachmann, M.10
Pääbo, S.11
-
7
-
-
34848866065
-
Novel high-resolution characterization of ancient DNA reveals C → U-type base modification events as the sole cause of post mortem miscoding lesions
-
P Brotherton P Endicott JJ Sanchez M Beaumont R Barnett J Austin A Cooper 2007 Novel high-resolution characterization of ancient DNA reveals C → U-type base modification events as the sole cause of post mortem miscoding lesions Nucleic Acids Res 35 5717 5728
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 5717-5728
-
-
Brotherton, P.1
Endicott, P.2
Sanchez, J.J.3
Beaumont, M.4
Barnett, R.5
Austin, J.6
Cooper, A.7
-
8
-
-
0034682945
-
Ancient DNA: Do it right or not at all
-
A Cooper HN Poinar 2000 Ancient DNA: do it right or not at all Science 289 1139
-
(2000)
Science
, vol.289
, pp. 1139
-
-
Cooper, A.1
Poinar, H.N.2
-
10
-
-
0025315366
-
High fidelity DNA synthesis by the Thermus aquaticus DNA polymerase
-
KA Eckert TA Kunkel 1990 High fidelity DNA synthesis by the Thermus aquaticus DNA polymerase Nucleic Acids Res 18 3739 3744
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 3739-3744
-
-
Eckert, K.A.1
Kunkel, T.A.2
-
11
-
-
0025268279
-
Spontaneous deamination of cytosine and 5-methylcytosine residues in DNA and replacement of 5-methylcytosine residues with cytosine residues
-
M Ehrlich XY Zhang NM Inamdar 1990 Spontaneous deamination of cytosine and 5-methylcytosine residues in DNA and replacement of 5-methylcytosine residues with cytosine residues Mutat Res 238 277 286
-
(1990)
Mutat Res
, vol.238
, pp. 277-286
-
-
Ehrlich, M.1
Zhang, X.Y.2
Inamdar, N.M.3
-
16
-
-
2942702305
-
Ancient mitochondrial DNA from hair
-
MT Gilbert AS Wilson M Bunce AJ Hansen E Willerslev B Shapiro TF Higham MP Richards TC O'Connell DJ Tobin RC Janaway A Cooper 2004 Ancient mitochondrial DNA from hair Curr Biol 14 R463 R464
-
(2004)
Curr Biol
, vol.14
-
-
Gilbert, M.T.1
Wilson, A.S.2
Bunce, M.3
Hansen, A.J.4
Willerslev, E.5
Shapiro, B.6
Higham, T.F.7
Richards, M.P.8
O'Connell, T.C.9
Tobin, D.J.10
Janaway, R.C.11
Cooper, A.12
-
18
-
-
33846667604
-
Recharacterization of ancient DNA miscoding lesions: Insights in the era of sequencing-by-synthesis
-
MT Gilbert J Binladen W Miller C Wiuf E Willerslev H Poinar JE Carlson JH Leebens-Mack SC Schuster 2007 Recharacterization of ancient DNA miscoding lesions: insights in the era of sequencing-by-synthesis Nucleic Acids Res 35 1 10
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 1-10
-
-
Gilbert, M.T.1
Binladen, J.2
Miller, W.3
Wiuf, C.4
Willerslev, E.5
Poinar, H.6
Carlson, J.E.7
Leebens-Mack, J.H.8
Schuster, S.C.9
-
19
-
-
34848867598
-
Whole-genome shotgun sequencing of mitochondria from ancient hair shafts
-
MT Gilbert LP Tomsho S Rendulic M Packard DI Drautz A Sher A Tikhonov L Dalen T Kuznetsova P Kosintsev PF Campos T Higham MJ Collins AS Wilson F Shidlovskiy B Buigues PG Ericson M Germonpre A Gotherstrom P Iacumin V Nikolaev M Nowak-Kemp E Willerslev JR Knight GP Irzyk CS Perbost KM Fredrikson TT Harkins S Sheridan W Miller SC Schuster 2007 Whole-genome shotgun sequencing of mitochondria from ancient hair shafts Science 317 1927 1930
-
(2007)
Science
, vol.317
, pp. 1927-1930
-
-
Gilbert, M.T.1
Tomsho, L.P.2
Rendulic, S.3
Packard, M.4
Drautz, D.I.5
Sher, A.6
Tikhonov, A.7
Dalen, L.8
Kuznetsova, T.9
Kosintsev, P.10
Campos, P.F.11
Higham, T.12
Collins, M.J.13
Wilson, A.S.14
Shidlovskiy, F.15
Buigues, B.16
Ericson, P.G.17
Germonpre, M.18
Gotherstrom, A.19
Iacumin, P.20
Nikolaev, V.21
Nowak-Kemp, M.22
Willerslev, E.23
Knight, J.R.24
Irzyk, G.P.25
Perbost, C.S.26
Fredrikson, K.M.27
Harkins, T.T.28
Sheridan, S.29
Miller, W.30
Schuster, S.C.31
more..
-
23
-
-
0026020273
-
Time of the deepest root for polymorphism in human mitochondrial DNA
-
M Hasegawa S Horai 1991 Time of the deepest root for polymorphism in human mitochondrial DNA J Mol Evol 32 37 42
-
(1991)
J Mol Evol
, vol.32
, pp. 37-42
-
-
Hasegawa, M.1
Horai, S.2
-
25
-
-
0035581087
-
DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA
-
M Hofreiter V Jaenicke D Serre A Haeseler Av S Pääbo 2001 DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA Nucleic Acids Res 29 4793 4799
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4793-4799
-
-
Hofreiter, M.1
Jaenicke, V.2
Serre, D.3
Haeseler Av, A.4
Pääbo, S.5
-
27
-
-
0036667685
-
Ancient DNA analyses reveal high mitochondrial DNA sequence diversity and parallel morphological evolution of late pleistocene cave bears
-
M Hofreiter C Capelli M Krings L Waits N Conard S Munzel G Rabeder D Nagel M Paunovic G Jambresic S Meyer G Weiss S Pääbo 2002 Ancient DNA analyses reveal high mitochondrial DNA sequence diversity and parallel morphological evolution of late pleistocene cave bears Mol Biol Evol 19 1244 1250
-
(2002)
Mol Biol Evol
, vol.19
, pp. 1244-1250
-
-
Hofreiter, M.1
Capelli, C.2
Krings, M.3
Waits, L.4
Conard, N.5
Munzel, S.6
Rabeder, G.7
Nagel, D.8
Paunovic, M.9
Jambresic, G.10
Meyer, S.11
Weiss, G.12
Pääbo, S.13
-
28
-
-
0025308462
-
Intraspecific nucleotide sequence differences in the major noncoding region of human mitochondrial DNA
-
S Horai K Hayasaka 1990 Intraspecific nucleotide sequence differences in the major noncoding region of human mitochondrial DNA Am J Hum Genet 46 828 842
-
(1990)
Am J Hum Genet
, vol.46
, pp. 828-842
-
-
Horai, S.1
Hayasaka, K.2
-
30
-
-
0036935437
-
Maintenance of mitochondrial DNA integrity: Repair and degradation
-
D Kang N Hamasaki 2002 Maintenance of mitochondrial DNA integrity: repair and degradation Curr Genet 41 311 322
-
(2002)
Curr Genet
, vol.41
, pp. 311-322
-
-
Kang, D.1
Hamasaki, N.2
-
31
-
-
0021769722
-
Hydroxylation of deoxyguanosine at the C-8 position by ascorbic acid and other reducing agents
-
H Kasai S Nishimura 1984 Hydroxylation of deoxyguanosine at the C-8 position by ascorbic acid and other reducing agents Nucleic Acids Res 12 2137 2145
-
(1984)
Nucleic Acids Res
, vol.12
, pp. 2137-2145
-
-
Kasai, H.1
Nishimura, S.2
-
32
-
-
0033988047
-
Ancient DNA analysis of human populations
-
CJ Kolman N Tuross 2000 Ancient DNA analysis of human populations Am J Phys Anthropol 111 5 23
-
(2000)
Am J Phys Anthropol
, vol.111
, pp. 5-23
-
-
Kolman, C.J.1
Tuross, N.2
-
34
-
-
0027278557
-
Instability and decay of the primary structure of DNA
-
T Lindahl 1993 Instability and decay of the primary structure of DNA Nature 362 709 715
-
(1993)
Nature
, vol.362
, pp. 709-715
-
-
Lindahl, T.1
-
35
-
-
0027378670
-
Recovery of antediluvian DNA
-
T Lindahl 1993 Recovery of antediluvian DNA Nature 365 700
-
(1993)
Nature
, vol.365
, pp. 700
-
-
Lindahl, T.1
-
36
-
-
0015753524
-
Heat-induced depyrimidination of deoxyribonucleic acid in neutral solution
-
T Lindahl O Karlstrom 1973 Heat-induced depyrimidination of deoxyribonucleic acid in neutral solution Biochemistry 12 5151 5154
-
(1973)
Biochemistry
, vol.12
, pp. 5151-5154
-
-
Lindahl, T.1
Karlstrom, O.2
-
37
-
-
0015504248
-
Rate of depurination of native deoxyribonucleic acid
-
T Lindahl B Nyberg 1972 Rate of depurination of native deoxyribonucleic acid Biochemistry 11 3610 3618
-
(1972)
Biochemistry
, vol.11
, pp. 3610-3618
-
-
Lindahl, T.1
Nyberg, B.2
-
38
-
-
0016257644
-
Heat-induced deamination of cytosine residues in deoxyribonucleic acid
-
T Lindahl B Nyberg 1974 Heat-induced deamination of cytosine residues in deoxyribonucleic acid Biochemistry 13 3405 3410
-
(1974)
Biochemistry
, vol.13
, pp. 3405-3410
-
-
Lindahl, T.1
Nyberg, B.2
-
39
-
-
4444285495
-
Mutagenesis by transient misalignment in the human mitochondrial DNA control region
-
BA Malyarchuk IB Rogozin 2004 Mutagenesis by transient misalignment in the human mitochondrial DNA control region Ann Hum Genet 68 324 339
-
(2004)
Ann Hum Genet
, vol.68
, pp. 324-339
-
-
Malyarchuk, B.A.1
Rogozin, I.B.2
-
40
-
-
0032779612
-
Pattern of nucleotide substitution and rate heterogeneity in the hypervariable regions i and II of human mtDNA
-
S Meyer G Weiss A von Haeseler 1999 Pattern of nucleotide substitution and rate heterogeneity in the hypervariable regions I and II of human mtDNA Genetics 152 1103 1110
-
(1999)
Genetics
, vol.152
, pp. 1103-1110
-
-
Meyer, S.1
Weiss, G.2
Von Haeseler, A.3
-
42
-
-
0035199796
-
Authenticating ancient human mitochondrial DNA
-
R Montiel A Malgosa P Francalacci 2001 Authenticating ancient human mitochondrial DNA Hum Biol 73 689 713
-
(2001)
Hum Biol
, vol.73
, pp. 689-713
-
-
Montiel, R.1
Malgosa, A.2
Francalacci, P.3
-
43
-
-
0000832946
-
Ancient DNA: Extraction, characterization, molecular cloning, and enzymatic amplification
-
S Pääbo 1989 Ancient DNA: extraction, characterization, molecular cloning, and enzymatic amplification Proc Natl Acad Sci USA 86 1939 1943
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 1939-1943
-
-
Pääbo, S.1
-
44
-
-
0025230558
-
DNA damage promotes jumping between templates during enzymatic amplification
-
S Pääbo DM Irwin AC Wilson 1990 DNA damage promotes jumping between templates during enzymatic amplification J Biol Chem 265 4718 4721
-
(1990)
J Biol Chem
, vol.265
, pp. 4718-4721
-
-
Pääbo, S.1
Irwin, D.M.2
Wilson, A.C.3
-
45
-
-
19944416873
-
Genetic analyses from ancient DNA
-
S Pääbo H Poinar D Serre V Jaenicke-Despres J Hebler N Rohland M Kuch J Krause L Vigilant M Hofreiter 2004 Genetic analyses from ancient DNA Annu Rev Genet 38 645 679
-
(2004)
Annu Rev Genet
, vol.38
, pp. 645-679
-
-
Pääbo, S.1
Poinar, H.2
Serre, D.3
Jaenicke-Despres, V.4
Hebler, J.5
Rohland, N.6
Kuch, M.7
Krause, J.8
Vigilant, L.9
Hofreiter, M.10
-
46
-
-
0026634346
-
The evolution of the mitochondrial D-loop region and the origin of modern man
-
G Pesole E Sbisa G Preparata C Saccone 1992 The evolution of the mitochondrial D-loop region and the origin of modern man Mol Biol Evol 9 587 598
-
(1992)
Mol Biol Evol
, vol.9
, pp. 587-598
-
-
Pesole, G.1
Sbisa, E.2
Preparata, G.3
Saccone, C.4
-
47
-
-
85023036487
-
The top 10 list: Criteria of authenticity for DNA from ancient and forensic samples
-
H Poinar 2003 The top 10 list: criteria of authenticity for DNA from ancient and forensic samples International Congress Series 1239 575 579
-
(2003)
International Congress Series
, vol.1239
, pp. 575-579
-
-
Poinar, H.1
-
48
-
-
0029663543
-
Amino acid racemization and the preservation of ancient DNA
-
HN Poinar M Hoss JL Bada S Pääbo 1996 Amino acid racemization and the preservation of ancient DNA Science 272 864 866
-
(1996)
Science
, vol.272
, pp. 864-866
-
-
Poinar, H.N.1
Hoss, M.2
Bada, J.L.3
Pääbo, S.4
-
49
-
-
0032540901
-
Molecular coproscopy: Dung and diet of the extinct ground sloth Nothrotheriops shastensis
-
HN Poinar M Hofreiter WG Spaulding PS Martin BA Stankiewicz H Bland RP Evershed G Possnert S Pääbo 1998 Molecular coproscopy: dung and diet of the extinct ground sloth Nothrotheriops shastensis Science 281 402 406
-
(1998)
Science
, vol.281
, pp. 402-406
-
-
Poinar, H.N.1
Hofreiter, M.2
Spaulding, W.G.3
Martin, P.S.4
Stankiewicz, B.A.5
Bland, H.6
Evershed, R.P.7
Possnert, G.8
Pääbo, S.9
-
50
-
-
0020650113
-
Infidelity of DNA synthesis associated with bypass of apurinic sites
-
RM Schaaper TA Kunkel LA Loeb 1983 Infidelity of DNA synthesis associated with bypass of apurinic sites Proc Natl Acad Sci USA 80 487 491
-
(1983)
Proc Natl Acad Sci USA
, vol.80
, pp. 487-491
-
-
Schaaper, R.M.1
Kunkel, T.A.2
Loeb, L.A.3
-
52
-
-
0025981359
-
Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG
-
S Shibutani M Takeshita AP Grollman 1991 Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG Nature 349 431 434
-
(1991)
Nature
, vol.349
, pp. 431-434
-
-
Shibutani, S.1
Takeshita, M.2
Grollman, A.P.3
-
55
-
-
33748783644
-
Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA
-
M Stiller RE Green M Ronan JF Simons L Du W He M Egholm JM Rothberg SG Keates ND Ovodov EE Antipina GF Baryshnikov YV Kuzmin AA Vasilevski GE Wuenschell J Termini M Hofreiter V Jaenicke-Despres S Pääbo 2006 Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA Proc Natl Acad Sci USA 103 13578 13584
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 13578-13584
-
-
Stiller, M.1
Green, R.E.2
Ronan, M.3
Simons, J.F.4
Du, L.5
He, W.6
Egholm, M.7
Rothberg, J.M.8
Keates, S.G.9
Ovodov, N.D.10
Antipina, E.E.11
Baryshnikov, G.F.12
Kuzmin, Y.V.13
Vasilevski, A.A.14
Wuenschell, G.E.15
Termini, J.16
Hofreiter, M.17
Jaenicke-Despres, V.18
Pääbo, S.19
-
56
-
-
0027157960
-
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
-
K Tamura M Nei 1993 Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees Mol Biol Evol 10 512 526
-
(1993)
Mol Biol Evol
, vol.10
, pp. 512-526
-
-
Tamura, K.1
Nei, M.2
|