Cell volume distributions reveal cell growth rates and division times

Journal of Theoretical Biology

Volumn 257, Issue 1, 2009, Pages 124-130

  Halter, Michael ^a   Elliott, John T ^a   Hubbard, Joseph B ^a   Tona, Alessandro ^b   Plant, Anne L ^a  

^a NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY   (United States)

^b SCIENCE APPLICATIONS INTERNATIONAL CORPORATION   (United States)

Author keywords

Biological noise; Cell cycle; Cellular population dynamics; Growth rate; Phenotypic variability

Indexed keywords

DNA; ENZYME; GROWTH RATE; INHIBITOR; MODEL; PHENOTYPIC PLASTICITY; STOCHASTICITY;

ANIMALS; CELL CYCLE; CELL DIVISION; CELL SIZE; MODELS, BIOLOGICAL; PHENOTYPE; STOCHASTIC PROCESSES;

EID: 59649107743     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2008.10.031     Document Type: Article

References (35)

1. Anderson E.C., and Petersen D.F. Cell growth and division. II. Experimental studies of cell volume distributions in mammalian suspension cultures. Biophys. J. 7 (1967) 353
2. Bar-Even A., Paulsson J., Maheshri N., Carmi M., O'Shea E., Pilpel Y., and Barkai N. Noise in protein expression scales with natural protein abundance. Nat. Genet. 38 (2006) 636
3. Bell G.I., and Anderson E.C. Cell growth and division. I. A mathematical model with applications to cell volume distributions in mammalian suspension cultures. Biophys. J. 7 (1967) 329
4. Bhadriraju K., Elliott J.T., Nguyen M., and Plant A.L. Quantifying myosin light chain phosphorylation in single adherent cells with automated fluorescence microscopy. BMC Cell Biol. 8 (2007) 43
5. Collins J.F., and Richmond M.H. Rate of growth of Bacillus cereus between divisions. J. Gen. Microbiol. 28 (1962) 15
6. Conlon I., and Raff M. Differences in the way a mammalian cell and yeast cells coordinate cell growth and cell-cycle progression. J. Biol. 2 (2003) 7
7. Dunn G.A., and Zicha D. Dynamics of fibroblast spreading. J. Cell Sci. 108 3 (1995) 1239
8. Elliott J.T., Woodward J.T., Langenbach K.J., Tona A., Jones P.L., and Plant A.L. Vascular smooth muscle cell response on thin films of collagen. Matrix Biol. 24 (2005) 489
9. Elowitz M.B., Levine A.J., Siggia E.D., and Swain P.S. Stochastic Gene Expression in a Single Cell. Science 297 (2002) 1183
10. Gardiner C.W. Handbook of Stochastic Methods for Physics, Chemistry, and the Natural Sciences (2004), Springer, Berlin
11. Hannsgen K.B., and Tyson J.J. Stability of the steady-state size distribution in a model of cell growth and division. J. Math. Biol. 22 (1985) 293
12. Hannsgen K.B., Tyson J.J., and Watson L.T. Steady-state size distributions in probabilistic models of the cell-division cycle. SIAM J. Appl. Math. 45 (1985) 523
13. Kaneko K., and Furusawa C. Consistency principle in biological dynamical systems. Theory Biosci. 127 (2008) 195
14. Killander D., and Zetterberg A. Quantitative cytochemical studies on the interphase growth. I. Determination of DNA, RNA and mass content of age determined mouse fibroblasts in vitro and of intercellular variation in generation time. Exp. Cell Res. 38 (1965) 272
15. Koch A.L., and Higgins M.L. Cell cycle dynamics inferred from the static properties of cells in balanced growth. J. Gen. Microbiol. 128 (1982) 2877
16. Kubitschek, H.E., 1969. Growth during bacterial cell cycle-analysis of cell size distribution. 9, 792.
17. Langenbach K.J., Elliott J.T., Tona A., McDaniel D., and Plant A.L. Thin films of type 1 collagen for cell by cell analysis of morphology and tenascin-C promoter activity. BMC Biotechnol. 6 (2006) 14
18. McAdams H.H., and Arkin A. Stochastic mechanisms in gene expression. Proc. Nat. Acad. Sci. USA 94 (1997) 814
19. McDaniel D.P., Shaw G.A., Elliott J.T., Bhadriraju K., Meuse C., Chung K.H., and Plant A.L. The stiffness of collagen fibrils influences vascular smooth muscle cell phenotype. Biophys. J. 92 (2007) 1759
20. Mettetal J.T., Muzzey D., Pedraza J.M., Ozbudak E.M., and van Oudenaarden A. Predicting stochastic gene expression dynamics in single cells. Proc. Nat. Acad. Sci. USA 103 (2006) 7304
21. Miyamoto H., Zeuthen E., and Rasmussen L. Clonal growth of mouse cells (strain L). J. Cell Sci. 13 (1973) 879
22. Painter P.R., and Marr A.G. Inequality of mean interdivision time and doubling time. J. Gen. Microbiol. 48 (1967) 155
23. Painter P.R., and Marr A.G. Mathematics of microbial populations. Ann. Rev. Microbiol. 22 (1968) 519
24. Pedraza J.M., and van Oudenaarden A. Noise propagation in gene networks. Science 307 (2005) 1965
25. Popescu G., Park Y., Lue N., Best-Popescu C., Deflores L., Dasari R.R., Feld M.S., and Badizadegan K. Optical imaging of cell mass and growth dynamics. Am. J. Physiol. Cell Physiol. 295 (2008) C538
26. Proud C.G. Signaling to translation: how signal transduction pathways control the protein synthetic machinery. Biochem. J. 403 (2007) 217
27. R Development Core Team, 2008. R: A language for statistical computing. R Foundation for Statistical Computing. ISBN 3-900051-07-0, URL:http://www.R-project.org.
28. Ramanathan S., and Swain P.S. Tracing the sources of cellular variation. Dev. Cell 9 (2005) 576
29. Raser J.M., and O'Shea E.K. Noise in gene expression: origins, consequences, and control. Science 309 (2005) 2010
30. Shapiro H.M. Practical Flow Cytometry (2003), Wiley-Liss, Hoboken N.J.
31. Shen F., Hodgson L., Rabinovich A., Pertz O., Hahn K., and Price J.H. Functional proteometrics for cell migration. Cytometry A 69 (2006) 563
32. Sigal A., Milo R., Cohen A., Geva-Zatorsky N., Klein Y., Alaluf I., Swerdlin N., Perzov N., Danon T., Liron Y., Raveh T., Carpenter A.E., Lahav G., and Alon U. Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins. Nat. Methods 3 (2006) 525
33. Smith J.A., and Martin L. Do cells cycle?. Proc. Nat. Acad. Sci. USA 70 (1973) 1263
34. Volfson D., Marciniak J., Blake W.J., Ostroff N., Tsimring L.S., and Hasty J. Origins of extrinsic variability in eukaryotic gene expression. Nature 439 (2006) 861
35. Zicha D., Genot E., Dunn G.A., and Kramer I.M. TGFbeta1 induces a cell-cycle-dependent increase in motility of epithelial cells. J. Cell Sci. 112 Pt 4 (1999) 447