Phylogenetic analysis of rubella virus strains from an outbreak in Madrid, Spain, from 2004 to 2005

Journal of Clinical Microbiology

Volumn 47, Issue 1, 2009, Pages 158-163

  Martinez Torres A O ^a,c   Mosquera, M M ^a,d   Sanz, J C ^b   Ramos, B ^b   Echevarria J E ^a,d  

^a INSTITUTO DE SALUD CARLOS III   (Spain)

^b Comunidad de Madrid ^*  (Spain)

^c UNIVERSIDAD DE PANAMÁ   (Panama)

^d CIBER EPIDEMIOLOGÍA Y SALUD PÚBLICA CIBERESP   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

ARTICLE; CLINICAL ARTICLE; CONTROLLED STUDY; EPIDEMIC; FEMALE; GENOTYPE; HUMAN; MALE; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; RUBELLA; RUBELLA VIRUS; SPAIN; VIRUS NEUTRALIZATION; VIRUS STRAIN; WORLD HEALTH ORGANIZATION;

RUBELLA; RUBELLA VIRUS;

EID: 58849159717     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.00469-08     Document Type: Article

References (41)

1. Amela, C., and I. Pachón. 2000. La Vigilancia Epidemiólogica del sarampion en el contexto del "Plan de acción para eliminar el sarampión en España." Bol. Epidemiol. Semanal. 8:169-172.
2. Anonymous. 2005. Brote Comunitario de Rubéola en la Población Residente en la Comunidad de Madrid. Bol. Epidemiol. Comunidad Madrid 11:33-53.
3. Anonymous. 1999. Calendario vacunal 1999. Bol. Epidemiol. Comunidad Madrid 4:50-59.
4. Anonymous. 2002. III Encuesta de serovigilancia de la Comunidad de Madrid. Bol. Epidemiol. Comunidad Madrid 8:3-43.
5. Anonymous. 1996. Nuevo calendario vacunal. Bol. Epidemiol. Comunidad Madrid 19:25-27.
6. Bosma, T. J., J. M. Best, K M. Corbett, J. E. Banatvala, and W. G. Starkey. 1996. Nucleotide sequence analysis of a major antigenic domain of the E1 glycoprotein of 22 rubella virus isolates. J. Gen. Virol. 77:2523-2530.
7. Caidi, H., E. S. Abernathy, A. Benjouad, S. Smit, J. Bwogi, M. Nanyunja, R. El Aouad, and J. Icenogle. 2008. Phylogenetic analysis of rubella viruses found in Morocco, Uganda, Cote d'lvoire and South Africa from 2001 to 2007. J. Clin. Virol. 42:86-90.
8. Casas, I., L. Powell, P. E. Klapper, and G. M. Cleator. 1995. New method for the extraction of viral RNA and DNA from cerebrospinal fluid for use in the polymerase chain reaction assay. J. Virol. Methods 53:25-36.
9. Centers for Disease Control and Prevention. 2005. Global Measles and Rubella Laboratory Network, January 2004-June 2005. MMWR Morb. Mortal. Wkly. Rep. 54:1100-1104.
10. Chantler, J., J. S. Wolinsky, and A. Tingle. 2001. Rubella virus, p. 963-990. In B. N. Fields, D. M. Knipe, and P. M. Howley (ed.), Fields virology, 4th ed., vol. 1. Lippincott-Raven Publishers, Philadelphia, PA.
11. Chaye, H., P. Chong, B. Tripet, B. Brush, and S. Gillam. 1992. Localization of the virus neutralizing and hemagglutinin epitopes of E1 glycoprotein of rubella virus. Virology 189:483-492.
12. Coffin, J. M. 1992. Genetic diversity and evolution of retroviruses. Curr. Top. Microbiol. Immunol. 176:143-164.
13. Fitch, W. M. 1996. The variety of human virus evolution. Mol. Phylogenet. Evol. 5:247-258.
14. Giessauf, A., T. Letschka, G. Walder, M. P. Dierich, and R. Wurzner. 2004. A synthetic peptide ELISA for the screening of rubella virus neutralizing antibodies in order to ascertain immunity. J. Immunol. Methods 287:1-11.
15. Hinman, A. R., B. S. Hersh, and C. A. de Quadros. 1998. Rational use of rubella vaccine for prevention of congenital rubella syndrome in the Americas. Rev. Panam. Salud Publica 4:156-160.
16. Hofmann, J., M. Renz, S. Meyer, A. von Haeseler, and U. G. Liebert. 2003. Phylogenetic analysis of rubella virus including new genotype I isolates. Virus Res. 96:123-128.
17. Hubschen, J. M., M. Yermalovich, G. Semeiko, E. Samoilovich, E. Blatun, S. De Landtsheer, and C. P. Muller. 2007. Co-circulation of multiple rubella virus strains in Belarus forming novel genetic groups within clade 1. J. Gen. Virol. 88:1960-1966.
18. Jin, L., and B. Thomas. 2007. Application of molecular and serological assays to case based investigations of rubella and congenital rubella syndrome. J. Med. Virol. 79:1017-1024.
19. Katow, S., H. Minahara, M. Fukushima, and Y. Yamaguchi. 1997. Molecular epidemiology of rubella by nucleotide sequences of the rubella virus E1 gene in three East Asian countries. J. Infect. Dis. 176:602-616.
20. Kinnunen, L., T. Poyry, and T. Hovi. 1992. Genetic diversity and rapid evolution of poliovirus in human hosts. Curr. Top. Microbiol. Immunol. 176:49-61.
21. Kremer, J. R., K. E. Brown, L. Jin, S. Santibanez, S. V. Shulga, Y. Aboudy, I. V. Demchyshyna, S. Djemileva, J. E. Echevarria, D. F. Featherstone, M. Hukic, K. Johansen, B. Litwinska, E. Lopareva, E. Lupulescu, A. Mentis, Z. Mihneva, M. M. Mosquera, M. Muscat, M. A. Naumova, J. Nedeljkovic, L. S. Nekrasova, F. Magurano, C. Fortuna, H. R. de Andrade, J. L. Richard, A. Robo, P. A. Rota, E. O. Samoilovich, I. Sarv, G. V. Semeiko, N. Shugayev, E. S. Utegenova, R. van Binnendijk, L. Vinner, D. Waku-Kouomou, T. F. Wild, D. W. Brown, A. Mankertz, C. P. Muller, and M. N. Mulders. 2008. High genetic diversity of measles virus, World Health Organization European region, 2005-2006. Emerg. Infect. Dis. 14:107-114.
22. Makowka, A., W. Gut, B. Litwinska, S. Santibanez, and A. Mankertz. 2007. Genotyping of measles and rubella virus strains circulating in Poland in 2007. Euro Surveill. 12:E071025 2. http://www.eurosurveillance.org/ ViewArticle.aspx?ArticleId=3295.
23. Mitchell, L. A., D. Decarie, A. J. Tingle, M. Zrein, and M. Lacroix. 1993. Identification of immunoreactive regions of rubella virus E1 and E2 envelope proteins by using synthetic peptides. Virus Res. 29:33-57.
24. Mitchell, L. A., A. J. Tingle, D. Decarie, and R. Shukin. 1999. Identification of rubella virus T-cell epitopes recognized in anamnestic response to RA27/3 vaccine: associations with boost in neutralizing antibody titer. Vaccine 17:2356-2365.
25. Mitchell, L. A., T. Zhang, M. Ho, D. Decarie, A. J. Tingle, M. Zrein, and M. Lacroix. 1992. Characterization of rubella virus-specific antibody responses by using a new synthetic peptide-based enzyme-linked immunosorbent assay. J. Clin. Microbiol. 30:1841-1847.
26. Mosquera Mdel, M., F. de Ory, M. Moreno, and J. E. Echevarria. 2002. Simultaneous detection of measles virus, rubella virus, and parvovirus B19 by using multiplex PCR. J. Clin. Microbiol. 40:111-116.
27. Mosquera Mdel, M., J. C. Sanz, J. E. Echevarria, N. Herranz, M. Fernandez, and F. de Ory. 2006. Diagnostic performance of specific IgM detection and genomic amplification in rubella. Enferm. Infecc. Microbiol. Clin. 24:251-253.
28. Mosquera, M. M., F. Ory, and J. E. Echevarria. 2005. Measles virus genotype circulation in Spain after implementation of the national measles elimination plan 2001-2003. J. Med. Virol. 75:137-146.
29. Ou, D., P. Chong, A. J. Tingle, and S. Gillam. 1993. MappingT-cellepitopes of rubella virus structural proteins E1, E2, and C recognized by T-cell lines and clones derived from infected and immunized populations. J. Med. Virol. 40:175-183.
30. Saitoh, M., N. Shinkawa, S. Shimada, Y. Segawa, K. Sadamasu, M. Hase-gawa, M. Kato, K. Kozawa, T. Kuramoto, O. Nishio, and H. Kimura. 2006. Phylogenetic analysis of envelope glycoprotein (E1) gene of rubella viruses prevalent in Japan in 2004. Microbiol. Immunol. 50:179-185.
31. Sanz, J. C., C. Lemos, D. Herrera, and R. Ramirez-Fernandez. 2004. Brote de rubeola en población inmigrante de origen latinoamericano. Enferm. Infecc. Microbiol. Clin. 22:197.
32. Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: molecular evolutionarygenetics analysis (MEGA) software version4.0. Mol. Biol. Evol. 24:1596-1599.
33. Terry, G. M., L. Ho-Terry, P. Londesborough, and K. R. Rees. 1988. Localization of the rubella E1 epitopes. Arch. Virol. 98:189-197.
34. Wain-Hobson, S. 1993. The fastest genome evolution ever described: HIV variation in situ. Curr. Opin. Genet. Dev. 3:878-883.
35. Wolinsky, J. S., M. McCarthy, O. Allen-Cannady, W. T. Moore, R. Jin, S. N. Cao, A. Lovett, and D. Simmons. 1991. Monoclonal antibody-defined epitope map of expressed rubella virus protein domains. J. Virol. 65:3986-3994.
36. World Health Organization. 2006. Global distribution of measles and rubella genotypes-update. Wkly. Epidemiol. Rec. 81:474-479.
37. World Health Organization. 2005. Standardization of the nomenclature for genetic characteristics of wild-type rubella viruses. Wkly. Epidemiol. Rec. 80:126-132.
38. World Health Organization. 25 September 2007, accession date. Strategic plan for measles and congenital rubella infection in the European region of WHO. World Health Organization Regional Office for Europe, Copenhagen, Denmark. [Online.] http://www.euro.who.int/document/e81567.pdf.
39. World Health Organization. 25 September 2007, accession date. Surveillance guidelines for measles and congenital rubella infections in the WHO European region. World Health Organization Regional Office for Europe, Copenhagen, Denmark. [Online.] http://www.euro.who.int/document/e82183.pdf.
40. World Health Organization. 2007. Update of standard nomenclature for wild-type rubella viruses, 2007. Wkly. Epidemiol. Rec. 82:216-222.
41. Zheng, D. P., T. K. Frey, J. Icenogle, S. Katow, E. S. Abernathy, K. J. Song, W. B. Xu, V. Yarulin, R. G. Desjatskova, Y. Aboudy, G. Enders, and M. Croxson. 2003. Global distribution of rubella virus genotypes. Emerg. Infect. Dis. 9:1523-1530.