Geographical clustering of Trypanosoma cruzi I groups from Colombia revealed by low-stringency single specific primer-PCR of the intergenic regions of spliced-leader genes

Parasitology Research

Volumn 104, Issue 2, 2009, Pages 399-410

  Mejía Jaramillo, Ana María ^a   Arboleda Sánchez, Sair ^a   Rodríguez, Ingrid Bibiana ^a   Cura, Carolina ^c   Salazar, Alexander ^a   Del Mazo, Jesús ^b   Triana Chávez, Omar ^a   Schijman, Alejandro Gabriel ^c,d  

^a UNIVERSIDAD DE ANTIOQUIA   (Colombia)

^b CENTRO DE INVESTIGACIONES BIOLÓGICAS   (Spain)

^c INSTITUTO DE INVESTIGACIONES EN INGENIERÍA GENÉTICA Y BIOLOGÍA MOLECULAR   (Argentina)

^d NONE   (Argentina)

Author keywords

[No Author keywords available]

Indexed keywords

SPACER DNA;

ANIMAL HUSBANDRY; ARTICLE; COLOMBIA; CONTROLLED STUDY; FECES ANALYSIS; GENE MUTATION; INSECT; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE ANALYSIS; TRYPANOSOMA CRUZI;

ANIMALS; CLUSTER ANALYSIS; COLOMBIA; DNA, INTERGENIC; DNA, PROTOZOAN; GENOTYPE; GEOGRAPHY; PHYLOGENY; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; RNA, SPLICED LEADER; SEQUENCE ANALYSIS, DNA; TRIATOMINAE; TRYPANOSOMA CRUZI;

ERATYRUS; MUS; PANSTRONGYLUS GENICULATUS; RHODNIUS PALLESCENS; TRYPANOSOMA CRUZI;

EID: 58649083469     PISSN: 09320113     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00436-008-1212-0     Document Type: Article

References (63)

1. HM Aguilar F Abad-Franch VJ Racines CA Paucar 1999 Epidemiology of Chagas disease in Ecuador. A brief review Mem Inst Oswaldo Cruz 94 387 393
2. AMB Alves A Tanui DF Almeida WMA Von Gruger 1993 Reversible changes in the izoenzyme electrophoretic mobility patterns and infectivity in clones of Trypanosoma cruzi Exp Parasitol 77 246 253
3. AMB Alves DF Almeida WMA Von Gruger 1994 Changes in Trypanosoma cruzi kinetoplast DNA minicircles induced by enviromental conditions and subcloning J Euk Microbiol 41 415 419
4. LO Andrade CR Machado E Chiari SD Pena AM Macedo 1999 Differential tissue distribution of diverse clones of Trypanosoma cruzi in infected mice Mol Biochem Parasitol 100 163 172
5. N Añez G Crisante F Maia da Silva A Rojas H Carrasco ES Umezawa AM Stolf JL Ramirez MG Teixeira 2004 Predominance of lineage I among Trypanosoma cruzi isolates from Venezuelan patients with different clinical profiles of acute Chagas Disease Trop Med Int Health 9 1319 1326
6. CL Black S Ocaña D Riner JA Costales MS Lascanro S Davila L Arcos-Teran JR Seed MJ Grijalva 2007 Household risk factors for Trypanosoma cruzi seropositivity in two geographic regions of Ecuador J Parasitol 93 12 16
7. MF Bosseno C Barnabe E Magallon-Gastelum F Lozano-Kasten J Ramsey B Espinoza SF Brenière 2002 Predominance of Trypanosoma cruzi lineage I in Mexico J Clin Microbiol 40 627 632
8. L Botero AM Mejia O Triana 2007 Caracterización biológica y genética de dos clones pertenecientes a los grupos I y II de Trypanosoma cruzi de Colombia Biomédica 27 64 74
9. SF Brenière MF Bosseno F Noierau N Yacsik P Liegeard C Aznar H Hontebeyric 2002 Integrate study of a Bolivian population infected by Trypanosoma cruzi, the agent of Chagas Disease Mem Inst Oswaldo Cruz 97 289 295
10. SF Brenière MF Bosseno E Magallon-Gastelum EG Castillo M Soto EC Montaño J Tejeda F Mathieu-Daude A Walter F Lozano-Kasten 2007 Peridomestic colonization of Triatoma longipennis (Hemiptera, Reduviidae) and Triatoma barberi (Hemiptera, Reduviidae) in a rural community with active transmission of Trypanosoma cruzi in Jalisco state, Mexico Acta Trop 101 249 257
11. S Brisse JC Dujardin M Tibayrenc 2000 Identification of six Trypanosoma cruzi lineages by sequence-characterised amplified region markers Mol Biochem Parasitol 111 95 105
12. CM Britto MM Lima O Sarquis MQ Pires CFS Coutinho R Duarte RS Pacheco 2008 Genetic polymorphism in Trypanosoma cruzi I isolated from Brazilian Northeast triatomines revealed by low-stringency single specific primer-polymerase chain reaction Parasitol Res 103 1111 1117
13. JM Burgos SR Beguer JM Freitas M Bisio T Duffy J Altcheh R Teijeiro H Lopez Alcoba F Deccarlini H Freilij MJ Levin J Levalle AM Macedo AG Schijman 2005 Molecular diagnosis and typing of Trypanosoma cruzi populations and lineages in cerebral Chagas disease in a patient with AIDS Am J Trop Med Hyg 73 1016 1018
14. JM Burgos J Altcheh M Bisio T Duffy HM Valadares ME Seidenstein R Piccinali JM Freitas MJ Levin L Macchi AM Macedo H Freilij AG Schijman 2007 Direct molecular profiling of minicircle signatures and lineages of Trypanosoma cruzi bloodstreams populations carrying congenital Chagas Disease Int J Parasitol 37 1319 1327
15. JM Burgos S Begher HM Valadares M Bisio T Duffy MJ Levin AM Macedo AG Schijman 2008 Molecular identification of Trypanosoma cruzi I tropism for central nervous system in Chagas reactivation due to AIDS Am J Trop Med Hyg 78 294 297
16. E Camandaroba E Reis M Gonçalves M Reis S Andrade 2003 Trypanosoma cruzi: susceptibility to chemotherapy with benznidazole of clones isolated from the highly resistant Colombian strains Rev Soc Bras Med Trop 36 201 209
17. EP Camargo 1964 Growth and differentiation in Trypanosoma cruzi. Origin of metacyclic trypanosomes in liquid media Rev Inst Med Trop São Paulo 6 93 100
18. HJ Carrasco A Torrellas C GarcIa M Segovia MD Feliciangeli 2005 Risk of Trypanosoma cruzi I (Kinetoplastida: Trypanosomatidae) transmission by Panstrongylus geniculatus (Hemiptera: Reduviidae) in Caracas (Metropolitan District) and neighboring States, Venezuela Int J Parasitol 35 1379 1384
19. LA Ceballos MV Cardinal GM Vasquez-Prokopec MA Lauricella MM Orozco R Cortinas AG Schijman MJ Levin U Kinston RE Gurtler 2006 Long-term reduction of Trypanosoma cruzi infection in sylvatic mammals following deforestation and sustained vector surveillance in northwestern Argentina Acta Tro 98 286 296
20. MR Cortez AP Pinho P Cuervo F Alfaro M Solano SC Xavier PS D'Andrea O Fernandes F Torrico F Noireau AM Jansen 2006 Trypanosoma cruzi (Kinetoplastida Trypanosomatidae): ecology of the transmission cycle in the wild environment of the Andean valley of Cochabamba, Bolivia Exp Parasitol 114 305 313
21. CA Cuba F Abad-Franch J Roldan-Rodriguez F Vargas L Pollack MA Miles 2002 The triatomines of northern Peru, with emphasis on the ecology and infection by trypanosomes of Rhodnius ecuadoriensis (Triatominae) Mem Inst Oswaldo Cruz 97 175 183
22. P Cuervo E Cupolillo I Segura N Saravia O Fernandes 2002 Genetic diversity of Colombian sylvatic Trypanosoma cruzi isolates revealed by the ribosomal DNA Mem Inst Oswaldo Cruz 97 877 880
23. J Dib R Chacón M Restrepo G Parra M Tibayrenc C Barnabe O Triana 2005 Epidemiología molecular de Trypanoma cruzi: incriminación de Eratyrus cuspidatus en la transmisión de la enfermedad de Chagas Biomédica 25 102
24. P Diosque C Bernabe AM Padilla JD Marco RM Cardizo RO Cimino JR Nasser M Tibayrenc MA Basombrio 2003 Multilocus enzyme electrophoresis analysis of Trypanosoma cruzi isolates from a geographically restricted endemic area for Chagas disease in Argentina Int J Parasitol 15 997 1003
25. C Fernandes RP Souto JA Castro J Pereira N Fernandes A Junqueira R Naife T Barret W Degrave B Zingales D Campbell J Coura 1998 Brazilian isolates of Trypanosoma cruzi from humans and triatomines classified into two lineages using mini-exon and ribosomal RNA sequences Am J Trop Med Hyg 58 807 811
26. O Fernandes RH Mangia CU Lisboa AP Pinho CM Morel B Zingales DA Campbell AM Jansen 1999 The complexity of the sylvatic cycle of Trypanosoma cruzi in Rio de Janeiro State (Brazil) revealed by the non-transcribed spacer of the mini-exon gene Parasitology 118 161 166
27. MA Gomes EF Silva AM Macedo AR Vago MN Melo 1997 LSSP-PCR for characterization of strains of Entamoeba histolytica isolated in Brazil Parasitology 114 517 520
28. Guhl F, Nicholls S (2001) Métodos indirectos. En Manual de procedimientos para el diagnóstico de la Enfermedad de Chagas, primera Edn. pp. 22-24. Universidad de los Andes, editorial.
29. A Henriksson U Petterson 1996 Karyotype variability in Trypanosoma cruzi Parasitol Today 12 108 114
30. C Herrera MD Bargues A Fajardo M Montilla O Triana GA Vallejo F Guhl 2007 Identifying four Trypanosoma cruzi I isolate haplotypes from differents geographic regions in Colombia Inf Genet Evol 7 535 539
31. AM Jansen AP Santos de Pinho CU Lisboa E Cupulillo RH Mangia O Fernandes 1999 The sylvatic cycle of Trypanosoma cruzi: a still unsolved puzzle Mem Inst Oswaldo Cruz 101 225 231
32. N Jaramillo J Moreno O Triana M Arcos-Burgos S Muñoz A Solari 1999 Genetic structure and phylogenetic relationship of Colombian Trypanosoma cruzi populations by schizodeme markers Am J Trop Med Hyg 61 986 993
33. DC López C Jaramillo F Guhl 2007 Population structure and genetic variability of Rhodnius prolixus (Hemiptera: Reduviidae) from different geographic areas of Colombia Biomedica 27 28 39
34. AM Macedo MS Martins E Chiari SD Pena 1992 DNA fingerprinting of Trypanosoma cruzi: a new tool for characterization of strains and clones Mol Biochem Parasitol 55 147 154
35. Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning. A laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
36. E Márquez M Arcos-Burgos O Triana J Moreno N Jaramillo 1998 Clonal population structure of wild Colombian Trypanosoma cruzi J Parasitol 84 1143 1149
37. MA Miles A Souza M Povoa JJ Shaw R Lainson PJ Toye 1978 Isozymic heterogeneity of Trypanosoma cruzi in the first autochthonous patients with Chagas' disease in Amazonian Brazil Nature 272 819 821
38. SA Miller DD Dykes HF Polesky 1988 A simple salting out procedure for extracting DNA from human nucleated cells Nucleic Acids Res 16 1215
39. M Montilla F Guhl C Jaramillo S Nicholls C Barnabe MF Bosseno SF Brenière 2002 Isoenzyme clustering of Trypanosomatidae Colombian populations Am J Trop Med Hyg 66 394 400
40. O O'Connor MF Bosseno C Barnabé E Douzery SF Brenière 2007 Genetic clustering of Trypanosoma cruzi I lineage evidenced by intergenic miniexon gene sequencing Infect Genet Evol 7 587 593
41. MA Oliveira OL Caballero AR Vago RA Harskeerl AJ Romanha SD Pena AJ Simpson MC Koury 2003 Low-stringency single specific primer PCR for identification Leptospira J Med Microbiology 52 127 135
42. SD Pena G Barreto AR Vago L De Marco F Reinach E Dias-Neto A Simpson 1994 Sequence-specific "gene signatures" can be obtained by PCR with single specific primers at low stringency Proc Natl Acad Sci USA 91 1946 1949
43. Rasband W (2004) ImageJ. National Institutes of Health, Bethesda, Maryland, USA, http://rsb.info.nih.gov/ij/
44. PD Ready MA Miles 1980 Delimitation of Trypanosoma cruzi zymodemes by numerical taxonomy Trans R Soc Trop Med Hyg 74 238 242
45. R Ruíz-Sánchez MP De León V Matta PA Reyes R López D Jay VM Monteón 2005 Trypanosoma cruzi isolates from Mexican and Guatemalan acute and chronic chagasic cardiopathy patients belong to Trypanosoma cruzi I Mem Inst Oswaldo Cruz 100 281 283
46. A Salazar AG Schijman O Triana 2006 High variability of Colombian Trypanosoma cruzi lineage I stocks as revealed by low-stringency single primer-PCR minicircle signatures Acta Trop 100 110 118
47. F Samudio E Ortega-Barría A Saldaña J Calzada 2007 Predominance of Trypanosoma cruzi I among Panamanian sylvatic isolates Acta Trop 101 178 181
48. A Solari A Wallace S Ortiz J Venegas G Sanchez 1998 Biological characterization of Trypanosoma cruzi stocks from Chilean insect vectors Exp Parasitol 89 312 322
49. RP Souto O Fernandes A Macedo D Campbell B Zingales 1996 DNA markers define two major phylogenetic lineages of Trypanosoma cruzi Mol Biochem Parasitol 83 141 152
50. M Steindel NE Dias CL de Menezes AJ Romanha AJ Simpson 1993 Random amplified polymorphic DNA analysis of Trypanosoma cruzi strains Mol Biochem Parasitol 60 71 79
51. NR Sturm W Degrave C Morel L Simpson 1989 Sensitive detection and schizodeme classification of Trypanosoma cruzi cells by amplification of kinetoplast minicircle DNA sequences: use in diagnosis of Chagas' disease Mol Biochem Parasitol 33 205 214
52. Swofford DL (2002) PAUP*: phylogenetic analysis using parsimony (*and other methods) version 4. Sinauer Associates, Sunderland
53. JD Thompson DG Higgins TJ Gibson 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680
54. M Tibayrenc K Neubauer C Bamabe F Guerrini D Skarecky FJ Ayala 1993 Genetic characterization of six parasitic protozoa: parity between random-primer DNA typing and multilocus enzyme electrophoresis Proc Natl Acad Sci USA 90 1335 1339
55. MJ Toledo MT Bahia CM Carneiro OA Martins-Filho M Tibayrenc C Barnabé WL Tafuri M Lana 2003 Chemotherapy with Benznidazole and Itraconazole for mice infected with different Trypanosoma cruzi clonal genotypes Antimicrob Agents Chemother 47 223 230
56. O Triana N Jaramillo J Moreno 1999 Genetic variability of seven Colombian populations of Trypanosoma cruzi and three of Trypanosoma rangeli Biol Res 32 1 10
57. O Triana S Ortiz JC Dujardin A Solari 2006 Trypanosoma cruzi: variability of stocks from Colombia determined by molecular karyotype and minicircle Southern blot analysis Exp Parasitol 113 62 66
58. LF Umekita I Mota 2000 How are antibodies involved in the protective mechanism of susceptible mice infected with Trypanosoma cruzi? Braz J Med Biol Res 33 253 258
59. AR Vago A Macedo R Oliveira LO Andrade E Chiari C Galvão D Reis M Pereira A Simpson S Tostes S Pena 1996 Kinetoplast DNA signatures of Trypanosoma cruzi stocks obtained directly from infected tissues Am J Pathol 149 2153 2159
60. MV Veloso CM Carneiro MJO Toledo M Lana E Chiari WL Tafuri MT Bahia 2001 Variation in susceptibility to benznidazole in isolates derived from Trypanosoma cruzi parental strains Mem Inst Oswaldo Cruz 96 1005 1011
61. L Villa OL Caballero JE Levi SD Pena AJ Simpson 1995 An approach to human papillomavirus identification using low stringency single specific primer PCR Mol Cell Probes 9 45 48
62. World Health Organization 2002 Control of Chagas Disease. Second report of the WHO expert committee WHO Tech Rep Ser 905 1 109
63. World Health Organization (2007) New global effort to eliminate Chagas disease. http://www.who.int/mediacentre/news/releases/2007/pr36/en/index.html. Cited 10 August 2007