Genetic variation in natural populations of Anthurium sinuatum and A. pentaphyllum var. pentaphyllum (Araceae) from north-east Brazil using AFLP molecular markers

Botanical Journal of the Linnean Society

Volumn 159, Issue 1, 2009, Pages 88-105

  Andrade, Ivanilza M ^a   Mayo, Simon J ^b   Van Den Berg, Cássio ^a   Fay, Michael F ^c   Chester, Michael ^c   Lexer, Christian ^c   Kirkup, Don ^b  

^a DEPARTAMENTO DE CIÊNCIAS BIOLÓGICAS   (Brazil)

^b ROYAL BOTANIC GARDENS   (United Kingdom)

^c JODRELL LABORATORY   (United Kingdom)

Author keywords

Amazonia; Atlantic forest; Brejo forests; French Guiana; Species' limits

Indexed keywords

ANGIOSPERM; CORRELATION; FOREST ECOSYSTEM; GENETIC VARIATION; MOLECULAR ANALYSIS; POPULATION DENSITY;

BRAZIL; SOUTH AMERICA;

ANTHURIUM; ANTHURIUM PENTAPHYLLUM; ARACEAE;

EID: 58449100500     PISSN: 00244074     EISSN: 10958339     Source Type: Journal    
DOI: 10.1111/j.1095-8339.2008.00945.x     Document Type: Article

References (69)

1. Ab'Sáber AN. 1977a. Os domínios morfoclimáticos na América do Sul. Universidade de São Paulo. Instituto de Geografia, São Paulo. Geomorfologia 52 : 23.
2. Ab'Sáber AN. 1977b. Espaços ocupados pela expansão dos climas secos na América do Sul, por ocasião dos períodos glaciais quaternários. São Paulo: Universidade de São Paulo, Instituto de Geografia. Paleoclimas 3 : 1 19.
3. Ab'Sáber AN. 1982. The paleoclimate and paleoecology of Brazilian Amazônia. In : Prance GT, ed. Biological diversification in the tropics. New York : Columbia University Press, 41 59.
4. Aguiar AP, Chiarello AG, Mendes SL, Matos EN. 2003. The Central and Serra do Mar corridors in the Brazilian Atlantic Forest. In : Gallindo-Leal C, Câmara IG, Benson P, eds. The Atlantic Forest of South America: biodiversity status, threats and outlook. Washington, DC : Island Press, 118 132.
5. Aide TM, Rivera E. 1998. Geographic patterns of genetic diversity in Poulsenia armata (Moraceae): implications for the theory of Pleistocene refugia and the importance of riparian forest. Journal of Biogeography 25 : 695 705.
6. Andrade IM, Mayo SJ, Van den Berg C, Fay MF, Chester M, Lexer C, Kirkup D. 2007. A preliminary study of genetic variation in populations of Monstera adansonii var. klotzschiana (Araceae) from north-east Brazil, estimated with AFLP molecular markers. Annals of Botany 100 : 1143 1154.
7. Andrade-Lima D. 1953. Notas sobre a dispersão de algumas espécies vegetais no Brasil. Anais da Sociedade de Biologia de Pernambuco 11 : 25 49.
8. Andrade-Lima D. 1960. Estudos fitogeográficos de Pernambuco. Arquivos do Instituto de Pesquisa Agronômica de Pernambuco 5 : 305 327.
9. Andrade-Lima D. 1966. Contribuição ao estudo do paralelismo da flora Amazônico-Nordestina. Boletim Técnico do Instituto de Pesquisas Agronômicas de Pernambuco, Nov. sér. 19 : 3 30.
10. Andrade-Lima D. 1982. Present-day forest refuges in northeastern Brazil. In : Prance GT, ed. Biological diversification in the tropics. New York : Columbia University Press, 245 251.
11. Applied Biosystems. 1996. AFLP plant mapping protocol. Part Number 4303146C. Foster City, CA : Applied Biosystems.
12. Barbará T, Martinelli G, Fay MF, Mayo SJ, Lexer C. 2007. Population differentiation and species cohesion in two closely related plants adapted to neotropical high-altitude 'inselbergs', Alcantarea imperialis and Alcantarea geniculata (Bromeliaceae). Molecular Ecology 16 : 1981 1992.
13. Barreto AMF, Pessenda LCR, Suguio K. 2002. Probable drier Holocene climate evidenced by charcoal bearing middle São Francisco river paleodunes, state of Bahia, Brazil. Anais da Academia Brasileira de Ciências 68 (Suppl. 43 48.
14. Behling H. 1998. Late Quaternary vegetational and climate changes in Brazil. Review of Paleobotany and Palynology 99 : 143 156.
15. Bigarella JJ, Andrade-Lima D. 1982. Paleoenvironmental changes in Brazil. In : Prance GT, ed. Biological diversification in the tropics. New York : Columbia University Press, 27 40.
16. Borges-Nojosa DM, Caramaschi U. 2003. Composição e análise comparativa da diversidade e das afinidades biogeográficas dos lagartos e anfisbenídeos (Squamata) dos brejos nordestinos. In : Leal I, Silva JMC, Tabarelli M, eds. Ecologia e Conservação da Caatinga, ed. 1. Recife : Universidade Federal de Pernambuco, 489 540.
17. Carnaval ACOQ. 2002. Phylogeography of four frog species in forest fragments of north-eastern Brazil - a preliminary study. Integrative and Comparative Biology 42 : 913 921.
18. CATE Araceae 2008. Creating a taxonomic e-science: Araceae. Available at: http://www.cate-araceae.org
19. Cavalcanti D, Tabarelli M. 2004. Distribuição das plantas amazônico-nordestinas no centro de endemismo Pernambuco: brejos de altitude vs. florestas de terras baixas. In : Porto KC, Cabral JJP, Tabarelli M, eds. Brejos de altitude em Pernambuco e Paraíba. Brasília : Ministério do Meio Ambiente, 285 296.
20. Costa LP. 2003. The historical bridge between the Amazon and the Atlantic forest of Brazil: a study of molecular phylogeography with small mammals. Journal of Biogeography 30 : 71 86.
21. Croat TB. 1980. Flowering behaviour of the neotropical genus Anthurium (Araceae). American Journal of Botany 67 : 888 904.
22. Croat TB, Sheffer RD. 1983. The sectional groupings of Anthurium (Araceae). Aroideana 6 : 85 123.
23. Doyle JJ, Doyle JL. 1987. Isolation of plant DNA from fresh tissue. Focus 12 : 13 15.
24. Ducke A. 1959. Estudos botânicos no Ceará. Anais da Academia Brasileira de Ciências 31 : 211 308.
25. Felsenstein J. 2006. PHYLIP: phylogeny inference package. Version 3.66, July 2006. Seattle, WA : University of Washington. Available for download at: http://evolution.gs.washington.edu/phylip.html
26. Gibernau M. 2003. Pollinators and visitors of aroid inflorescences. Aroideana 26 : 66 83.
27. Giulietti AM, Forero E. 1990. 'Workshop' Diversidade taxonômica e padrões de distribuição das Angiospermas brasileiras - Introdução. Acta Botânica Brasílica 4 : 3 10.
28. Hartl DL, Clark AG. 1997. Principles of population genetics, 3rd edn. Sunderland, MA : Sinauer Associates.
29. Holmgren PK, Holmgren NH. 1998 continuously updated]. Index herbariorum: a global directory of public herbaria and associated staff. Available at: http://sciweb.nybg.org/science2/IndexHerbariorum.asp
30. Holsinger KE, Lewis PO. 2003. Hickory: a package for analysis of population genetic data v1.0. Distributed by the authors. Version 1.0.4. Storrs, CT : University of Connecticut. Available for download at http://darwin.eeb. uconn.edu/hickory/hickory.html
31. Holsinger KE, Lewis PO, Dey DK. 2002. A Bayesian approach to inferring population structure from dominant markers. Molecular Ecology 11 : 1157 1164.
32. IBGE. 1985. Atlas nacional do Brasil. Rio de Janeiro : IBGE.
33. IBGE. 2008. Mapa de vegetação. Available at: http://mapas.ibge.gov.br/website/vegetacao/
34. Ledru MP. 1991. Etude de la pluie pollinique actuelle des forêts de Brasil central: climat, végétation, application à l'étude de l'évolution paléoclimatique des 30.000 dernières années. Unpublished doctoral thesis. Paris : Museum National d'Histoire Naturelle.
35. Ledru MP. 1993. Late Quaternary environmental and climatic changes in central Brazil. Quaternary Research 39 : 90 98.
36. Levey DJ. 1988. Spatial and temporal variation in Costa Rican fruit and fruit-eating bird abundance. Ecological Monographs 58 : 251 269.
37. Lima DC, Ferreira AR, Cavalcanti AO. 1975. Estudos sobre a posição dos brejos de Pernambuco. Revista Pernambucana de Desenvolvimento 2 : 29 53.
38. Lins R. 1989. Áreas de exceção do Agreste de Pernambuco. Recife : SUDENE/PSU/SER.
39. Lourenço WR. 1988. Première evidence de la présence d'une faune scorpionique amazonienne relictuelle dans les 'brejos' de la caatinga du nord-est du Brésil. Bulletin de la Société Scientifique de Bretagne 59 : 147 154
40. Lynch M, Milligan BG. 1994. Analysis of population genetic structure with RAPD markers. Molecular Ecology 3 : 91 99.
41. Madison MT. 1978. The species of Anthurium with palmately divided leaves. Selbyana 2 : 239 282.
42. Mayo SJ, Bogner J, Boyce PC. 1997. The genera of Araceae. Kew : Royal Botanic Gardens.
43. Morjan CL, Rieseberg LH. 2004. How species evolve collectively: implications of gene flow and selection for the spread of advantageous alleles. Molecular Ecology 13 : 1341 1356.
44. Murawski DA, Hamrick JL. 1990. Local genetic and clonal structure in the tropical terrestrial bromeliad, Aechmea magdalenae. American Journal of Botany 77 : 1201 1208.
45. Oliveira PE, Barreto AMF, Suguio K. 1999. Late Pleistocene/Holocene climatic and vegetational history of the Brazilian caatinga: the fossil dunes of the middle São Francisco River. Palaeogeography, Palaeoclimatology, Palaeoecology 152 : 319 337.
46. Oliveira-Filho AT, Ratter JA. 1995. A study of the origin of central Brazilian forests by the analysis of plant species distribution patterns. Edinburgh Journal of Botany 52 : 141 194.
47. Peakall R, Smouse PE. 2006. GENALEX 6: genetic analysis in excel. Population genetic software for teaching and research. Molecular Ecology Notes 6 : 288 295. Available for downloading at http://www.anu.edu.au/BoZo/GenAlEx/
48. Petersen G. 1989. Cytology and systematics of Araceae. Nordic Journal of Botany 9 : 119 166.
49. Pôrto KC, Cabral JJP, Tabarelli M. 2004. Brejos de altitude em Pernambuco e Paraíba: história natural, ecologia e conservação. Brasília : Ministério do Meio Ambiente.
50. Prance GT. 1973. Phytogeographic support for the theory of Pleistocene forest refuges in the Amazon basin, based on evidence from distribution patterns in Caryocaraceae, Chrysobalanaceae, Dichapetalaceae and Lecythidaceae. Acta Amazônica 3 : 5 28.
51. Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure from multilocus genotype data. Genetics 155 : 945 959. Available for downloading at http://pritch.bsd.uchicago.edu/software/structure2-1.html
52. Pritchard JK, Wen W. 2004. Documentation for structure software, Version 2. Chicago, IL : University of Chicago. Available for downloading at http://pritch.bsd.uchicago.edu
53. R Development Core Team. 2006. R: A language and environment for statistical computing. Vienna : R Foundation for Statistical Computing. ISBN 3-900051-07-0. Available for downloading at http://www.r-project.org
54. Ramalho FC. 1994. Taxonomia e número cromossômico de representantes da família Araceae em Pernambuco. MSc dissertation. Recife : Universidad Federal Rural de Pernambuco.
55. Rodal MJN, Sales MF, Mayo SJ. 1998. Florestas serranas de Pernambuco: localização dos remanescentes dos brejos de altitude. Recife : Imprensa Universitária, Universidade Federal Rural de Pernambuco.
56. Rohlf FJ. 2005. NTSYSpc: numerical taxonomy system ver. 2.20d. Setauket : Exeter Publishing Ltd.
57. Sales MF, Mayo SJ, Rodal MJN. 1998. Plantas vasculares das florestas serranas de Pernambuco: Um checklist da flora ameaçada dos brejos de altitude, Pernambuco Brasil. Recife : Imprensa Universitária, Universidad Federal Rural de Pernambuco.
58. Sampaio VSB, Giulietti AM, Virginio J, Gamarra-Rojas FL. 2002. Vegetação e flora da caatinga. Associação Plantas do Nordeste. Recife : APNE Centro Nordestino de Informação Sobre Plantas.
59. Schneider S, Roessli D, Excoffier L. 2000. Arlequin: a software for population genetic data: genetics and biometry laboratory. Geneva : University of Geneva. Available for downloading at http://lgb.unige.ch/arlequin/
60. Schwerdtfeger M, Gerlach G, Kaiser R. 2002. Anthecology in the neotropical genus Anthurium (Araceae): a preliminary report. Selbyana 23 : 258 267.
61. Sneath PHA, Sokal RR. 1973. Numerical taxonomy: the principles and practice of numerical classification. San Francisco, CA : WH Freeman.
62. Stefenon VM, Mailing O, Finkeldey R. 2007. Genetic structure of Araucaria angustifolia (Araucariaceae) populations in Brazil: implications for the in situ conservation of genetic resources. Plant Biology 9 : 516 525.
63. TROPICOS. 2006. w3TROPICOS. Available at http://mobot.mobot.org/W3T/ Search/vast.html.
64. Vanzolini PE. 1973. Paleoclimates, relief and species multiplication in equatorial forests. In : Meggers BJ, Ayensu ES, Duckworth WD, eds. Tropical forest ecosystems in Africa and South America: a comparative review. Washington DC : Smithsonian Institution Press, 255 258.
65. Vasconcelos A, Almeida WO, Costa EC. 2004. Onychophora de florestas úmidas do complexo da atlântica do nordeste brasileiro e sua importância para a conservação e estudos sistemáticos. In : Porto KC, Cabral JJP, Tabarelli M, eds. Brejos de altitude em Pernambuco e Paraíba. Brasília : Ministério do Meio Ambiente, 139 144.
66. Vekemans X. 2002. AFLP-SURV version 1.0. Distributed by the author. Brussels : Laboratoire de Génétique et Ecologie Végétale, Université Libre de Bruxelles. Available for downloading at http://www.ulb.be/sciences/lagev/aflp-surv.html
67. Vekemans X, Beauwens T, Lemaire M, Roldan-Ruiz I. 2002. Data from amplified fragment length polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size. Molecular Ecology 11 : 139 151.
68. Vos P, Hogers R, Bleeker M, Reijans M, Van de Lee T, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research 23 : 4407 4414.
69. Zhivotovsky LA. 1999. Estimating population structure in diploids with multilocus dominant DNA markers. Molecular Ecology 8 : 907 913.