메뉴 건너뛰기




Volumn 47, Issue 1, 2009, Pages 35-41

Complete mitochondrial genomes of three lizard species and the systematic position of the Lacertidae (Squamata)

Author keywords

Complete mitochondrial genomes; Control region; Lacertidae; Lizards; Phylogeny; Squamata; Substitution rate

Indexed keywords

GENETIC MARKER; LIZARD; MITOCHONDRIAL DNA; PHYLOGENY; TAXONOMY;

EID: 58349104015     PISSN: 09475745     EISSN: 14390469     Source Type: Journal    
DOI: 10.1111/j.1439-0469.2008.00515.x     Document Type: Article
Times cited : (13)

References (33)
  • 1
    • 58349083198 scopus 로고    scopus 로고
    • Effect of taxon sampling on recovering the phylogeny of squamate reptiles based on complete mitochondrial genome and nuclear gene sequence data
    • in press, doi
    • Albert EM, San Mauro D, García-París M, Rüber L, Zardoya R (2008) Effect of taxon sampling on recovering the phylogeny of squamate reptiles based on complete mitochondrial genome and nuclear gene sequence data. Gene, in press, doi
    • (2008) Gene
    • Albert, E.M.1    San Mauro, D.2    García-París, M.3    Rüber, L.4    Zardoya, R.5
  • 2
    • 14744302097 scopus 로고    scopus 로고
    • Mitochondrial genome of Pogona vitticepes (Reptilia; Agamidae): Control region duplication and the origin of Australasian agamids
    • Amer SA, Kumazawa Y (2005) Mitochondrial genome of Pogona vitticepes (Reptilia; Agamidae): control region duplication and the origin of Australasian agamids. Gene 346 : 249 256.
    • (2005) Gene , vol.346 , pp. 249-256
    • Amer, S.A.1    Kumazawa, Y.2
  • 3
    • 0037040008 scopus 로고    scopus 로고
    • Vertebral intercentra in Lacertidae: Variation and phylogenetic implications
    • Barbadillo LJ, Martínez-Solano I (2002) Vertebral intercentra in Lacertidae: variation and phylogenetic implications. Copeia 2002 : 208 212.
    • (2002) Copeia , vol.2002 , pp. 208-212
    • Barbadillo, L.J.1    Martínez-Solano, I.2
  • 4
    • 34247155318 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the green lizard Lacerta viridis viridis (Reptilia: Lacertidae) and its phylogenetic position within squamate reptiles
    • Böhme MU, Fritzsch G, Tippmann A, Schlegel M, Berendonk TU (2007) The complete mitochondrial genome of the green lizard Lacerta viridis viridis (Reptilia: Lacertidae) and its phylogenetic position within squamate reptiles. Gene 394 : 69 77.
    • (2007) Gene , vol.394 , pp. 69-77
    • Böhme, M.U.1    Fritzsch, G.2    Tippmann, A.3    Schlegel, M.4    Berendonk, T.U.5
  • 5
    • 0037228881 scopus 로고    scopus 로고
    • Structure and evolution of the mitochondrial DNA complete control region in the lizard Lacerta dugesii (Lacertidae, Sauria)
    • Brehm A, Harris J, Alves C, Jesus J, Thomarat F, Vicente L (2003) Structure and evolution of the mitochondrial DNA complete control region in the lizard Lacerta dugesii (Lacertidae, Sauria). J Mol Evol 56 : 46 53.
    • (2003) J Mol Evol , vol.56 , pp. 46-53
    • Brehm, A.1    Harris, J.2    Alves, C.3    Jesus, J.4    Thomarat, F.5    Vicente, L.6
  • 6
    • 0020328686 scopus 로고
    • Mitochondrial DNA sequences of primates: Tempo and mode of evolution
    • Brown WM, Prager EM, Wang A, Wilson AC (1982) Mitochondrial DNA sequences of primates: tempo and mode of evolution. J Mol Evol 18 : 225 239.
    • (1982) J Mol Evol , vol.18 , pp. 225-239
    • Brown, W.M.1    Prager, E.M.2    Wang, A.3    Wilson, A.C.4
  • 7
    • 0033249070 scopus 로고    scopus 로고
    • Squamate phylogeny and the relationships of snakes and mosasauroids
    • Caldwell MW (1999) Squamate phylogeny and the relationships of snakes and mosasauroids. Zool J Linn Soc 125 : 115 147.
    • (1999) Zool J Linn Soc , vol.125 , pp. 115-147
    • Caldwell, M.W.1
  • 8
    • 0012353175 scopus 로고
    • Elongation of displacement-loop strands in human and mouse mitochondrial DNA is arrested near specific template sequences
    • Doda JN, Wright CT, Clayton DA (1981) Elongation of displacement-loop strands in human and mouse mitochondrial DNA is arrested near specific template sequences. Proc Natl Acad Sci U S A 78 : 6116 6120.
    • (1981) Proc Natl Acad Sci U S a , vol.78 , pp. 6116-6120
    • Doda, J.N.1    Wright, C.T.2    Clayton, D.A.3
  • 9
    • 23944461017 scopus 로고    scopus 로고
    • Complete mitochondrial DNA sequences of six snakes: Phylogenetic relationships and molecular evolution of genomic features
    • Dong S, Kumazawa Y (2005) Complete mitochondrial DNA sequences of six snakes: phylogenetic relationships and molecular evolution of genomic features. J Mol Evol 61 : 12 22.
    • (2005) J Mol Evol , vol.61 , pp. 12-22
    • Dong, S.1    Kumazawa, Y.2
  • 10
    • 33750308129 scopus 로고    scopus 로고
    • A mitogenetic study on the phylogenetic position of snakes
    • Douglas D, Janke A, Arnason U (2006) A mitogenetic study on the phylogenetic position of snakes. Zool Scr 35 : 545 558.
    • (2006) Zool Scr , vol.35 , pp. 545-558
    • Douglas, D.1    Janke, A.2    Arnason, U.3
  • 11
    • 0002503798 scopus 로고
    • Phylogenetic relationships within Squamata
    • In: Estes, R., Pregill, G.K. (. eds. Stanford University Press, CA, USA, pp
    • Estes R, de Queiros K, Gauthier J (1988) Phylogenetic relationships within Squamata. In : Estes R, Pregill GK (eds Phylogenetic Relationships of the Lizard Families. Stanford University Press, CA, USA, pp 119 282.
    • (1988) Phylogenetic Relationships of the Lizard Families. , pp. 119-282
    • Estes, R.1    De Queiros, K.2    Gauthier, J.3
  • 12
    • 0023943474 scopus 로고
    • Comparisons of ape and human sequences that regulate mitochondrial DNA transcription and D-loop DNA synthesis
    • Foran DR, Hixson JE, Brown WM (1988) Comparisons of ape and human sequences that regulate mitochondrial DNA transcription and D-loop DNA synthesis. Nucleic Acids Res 16 : 5841 5861.
    • (1988) Nucleic Acids Res , vol.16 , pp. 5841-5861
    • Foran, D.R.1    Hixson, J.E.2    Brown, W.M.3
  • 13
    • 0034808442 scopus 로고    scopus 로고
    • The complete sequence of the mitochondrial genome of Buteo buteo (Aves, Accipitridae) indicates an early split in the phylogeny of raptors
    • Haring E, Kruckenhauser L, Gamauf A, Riesing MJ, Pinsker W (2001) The complete sequence of the mitochondrial genome of Buteo buteo (Aves, Accipitridae) indicates an early split in the phylogeny of raptors. Mol Biol Evol 18 : 1892 1904.
    • (2001) Mol Biol Evol , vol.18 , pp. 1892-1904
    • Haring, E.1    Kruckenhauser, L.2    Gamauf, A.3    Riesing, M.J.4    Pinsker, W.5
  • 15
    • 0023909321 scopus 로고
    • An improved rapid method for mitochondrial DNA isolation suitable for use in the study of closely related populations
    • Jones CS, Tegelström H, Latchman DS, Berry RJ (1988) An improved rapid method for mitochondrial DNA isolation suitable for use in the study of closely related populations. Biochem Genet 26 : 83 88.
    • (1988) Biochem Genet , vol.26 , pp. 83-88
    • Jones, C.S.1    Tegelström, H.2    Latchman, D.S.3    Berry, R.J.4
  • 16
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5 : 150 163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 17
    • 11144311319 scopus 로고    scopus 로고
    • Mitochondrial DNA sequences of five squamates: Phylogenetic affiliation of snakes
    • Kumazawa Y (2004) Mitochondrial DNA sequences of five squamates: phylogenetic affiliation of snakes. DNA Res 11 : 137 144.
    • (2004) DNA Res , vol.11 , pp. 137-144
    • Kumazawa, Y.1
  • 18
    • 33845787944 scopus 로고    scopus 로고
    • Mitochondrial genomes from major lizard families suggest their phylogenetic relationships and ancient radiations
    • Kumazawa Y (2007) Mitochondrial genomes from major lizard families suggest their phylogenetic relationships and ancient radiations. Gene 388 : 19 26.
    • (2007) Gene , vol.388 , pp. 19-26
    • Kumazawa, Y.1
  • 19
    • 11144329138 scopus 로고    scopus 로고
    • Mitochondrial genome of the Komodo dragon: Efficient sequencing method with reptile-oriented primers and novel gene rearrangements
    • Kumazawa Y, Endo H (2004) Mitochondrial genome of the Komodo dragon: efficient sequencing method with reptile-oriented primers and novel gene rearrangements. DNA Res 11 : 115 125.
    • (2004) DNA Res , vol.11 , pp. 115-125
    • Kumazawa, Y.1    Endo, H.2
  • 20
    • 0027482104 scopus 로고
    • Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics
    • Kumazawa Y, Nishida M (1993) Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics. J Mol Evol 37 : 380 398.
    • (1993) J Mol Evol , vol.37 , pp. 380-398
    • Kumazawa, Y.1    Nishida, M.2
  • 21
    • 0031696736 scopus 로고    scopus 로고
    • The complete nucleotide sequence of a snake (Dinodon semicarinatus) mitochondrial genome with two identical control regions
    • Kumazawa Y, Ota H, Nishida M, Ozawa T (1998) The complete nucleotide sequence of a snake (Dinodon semicarinatus) mitochondrial genome with two identical control regions. Genetics 150 : 313 329.
    • (1998) Genetics , vol.150 , pp. 313-329
    • Kumazawa, Y.1    Ota, H.2    Nishida, M.3    Ozawa, T.4
  • 22
    • 4344579582 scopus 로고    scopus 로고
    • Phylogenetic relationships among amphisbaenian reptiles based on complete mitochondrial genomic sequences
    • Macey JR, Papenfuss TJ, Kuehl JV, Fourcade HM, Boore JL (2004) Phylogenetic relationships among amphisbaenian reptiles based on complete mitochondrial genomic sequences. Mol Phylogenet Evol 33 : 22 31.
    • (2004) Mol Phylogenet Evol , vol.33 , pp. 22-31
    • MacEy, J.R.1    Papenfuss, T.J.2    Kuehl, J.V.3    Fourcade, H.M.4    Boore, J.L.5
  • 23
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada D, Crandall KA (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14 : 817 818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 25
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 : 1572 1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 27
    • 0031593240 scopus 로고    scopus 로고
    • Mammalian mitochondrial D-loop region structural analysis: Identification of new conserved sequences and their functional and evolutionary implications
    • Sbisà E, Tanzariello F, Reyes A, Pesole G, Saccone C (1997) Mammalian mitochondrial D-loop region structural analysis: identification of new conserved sequences and their functional and evolutionary implications. Gene 205 : 125 140.
    • (1997) Gene , vol.205 , pp. 125-140
    • Sbisà, E.1    Tanzariello, F.2    Reyes, A.3    Pesole, G.4    Saccone, C.5
  • 29
    • 9644269182 scopus 로고    scopus 로고
    • Molecular phylogenetics of Squamata: The position of snakes, amphisbaenians, and dibamids, and the root of the squamate tree
    • Townsend T, Larson A, Louis E, Macey JR (2004) Molecular phylogenetics of Squamata: the position of snakes, amphisbaenians, and dibamids, and the root of the squamate tree. Syst Biol 53 : 735 757.
    • (2004) Syst Biol , vol.53 , pp. 735-757
    • Townsend, T.1    Larson, A.2    Louis, E.3    MacEy, J.R.4
  • 30
    • 2342633801 scopus 로고    scopus 로고
    • Molecular evidence for a terrestrial origin of snakes
    • Vidal N, Hedges SB (2004) Molecular evidence for a terrestrial origin of snakes. Proc R Soc Lond B (Suppl.) 271 : S226 S229.
    • (2004) Proc R Soc Lond B (Suppl.) , vol.271
    • Vidal, N.1    Hedges, S.B.2
  • 31
    • 28044466648 scopus 로고    scopus 로고
    • The phylogeny of squamate reptiles (lizards, snakes, and amphisbaenians) inferred from nine nuclear protein-coding genes
    • Vidal N, Hedges SB (2005) The phylogeny of squamate reptiles (lizards, snakes, and amphisbaenians) inferred from nine nuclear protein-coding genes. C R Biol 328 : 1000 1008.
    • (2005) C R Biol , vol.328 , pp. 1000-1008
    • Vidal, N.1    Hedges, S.B.2
  • 32
    • 33746780603 scopus 로고    scopus 로고
    • The complete mitochondrial genome of Gekko gecko (Reptilia: Gekkonidae) and support for the monophyly of Sauria including Amphisbaenia
    • Zhou K, Li H, Han D, Bauer AM, Feng J (2006) The complete mitochondrial genome of Gekko gecko (Reptilia: Gekkonidae) and support for the monophyly of Sauria including Amphisbaenia. Mol Phylogenet Evol 40 : 887 892.
    • (2006) Mol Phylogenet Evol , vol.40 , pp. 887-892
    • Zhou, K.1    Li, H.2    Han, D.3    Bauer, A.M.4    Feng, J.5
  • 33
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31 : 3406 3415.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.